EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000008848 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 7141 bases
Position: chrJH422307.1:2452368-2459508
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000011371	S10_plectin	PF03501.15	3.4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000011692	-	435	-	ENSNBRP00000011371	144 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000008848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000008848's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000008848	-	92	56.204	ENSNBRG00000009084	rps10	60	66.337
ENSNBRG00000008848	-	98	56.738	ENSNBRG00000016554	-	67	63.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000008848	-	73	64.762	ENSAPOG00000016494	-	54	64.762	Acanthochromis_polyacanthus
ENSNBRG00000008848	-	83	90.756	ENSAPOG00000014059	-	82	90.756	Acanthochromis_polyacanthus
ENSNBRG00000008848	-	83	64.167	ENSACIG00000019704	-	58	64.167	Amphilophus_citrinellus
ENSNBRG00000008848	-	95	94.161	ENSACIG00000013806	-	70	96.825	Amphilophus_citrinellus
ENSNBRG00000008848	-	77	66.667	ENSAOCG00000007730	-	65	66.667	Amphiprion_ocellaris
ENSNBRG00000008848	-	99	86.620	ENSAOCG00000011000	-	73	89.683	Amphiprion_ocellaris
ENSNBRG00000008848	-	61	60.227	ENSAPEG00000017745	-	56	60.227	Amphiprion_percula
ENSNBRG00000008848	-	75	89.815	ENSAPEG00000019531	-	61	89.815	Amphiprion_percula
ENSNBRG00000008848	-	71	71.569	ENSATEG00000004340	-	72	71.569	Anabas_testudineus
ENSNBRG00000008848	-	98	56.738	ENSACLG00000001013	-	67	63.115	Astatotilapia_calliptera
ENSNBRG00000008848	-	87	81.600	ENSAMXG00000037914	-	75	81.600	Astyanax_mexicanus
ENSNBRG00000008848	-	65	56.383	WBGene00004479	rps-10	62	56.383	Caenorhabditis_elegans
ENSNBRG00000008848	-	71	60.194	ENSCING00000006180	-	64	60.194	Ciona_intestinalis
ENSNBRG00000008848	-	99	83.099	ENSCSEG00000009179	-	74	87.200	Cynoglossus_semilaevis
ENSNBRG00000008848	-	93	55.224	FBgn0285947	RpS10b	71	58.475	Drosophila_melanogaster
ENSNBRG00000008848	-	70	58.416	FBgn0027494	RpS10a	61	58.416	Drosophila_melanogaster
ENSNBRG00000008848	-	71	57.143	ENSEBUG00000015221	-	73	57.143	Eptatretus_burgeri
ENSNBRG00000008848	-	88	62.698	ENSEASG00005009727	-	53	62.698	Equus_asinus_asinus
ENSNBRG00000008848	-	97	85.612	ENSFHEG00000008769	-	79	87.302	Fundulus_heteroclitus
ENSNBRG00000008848	-	88	87.302	ENSGAFG00000001335	-	65	87.302	Gambusia_affinis
ENSNBRG00000008848	-	98	56.738	ENSHBUG00000018067	-	67	63.115	Haplochromis_burtoni
ENSNBRG00000008848	-	99	91.608	ENSHBUG00000023819	-	84	91.608	Haplochromis_burtoni
ENSNBRG00000008848	-	92	67.910	ENSLBEG00000020432	-	78	70.400	Labrus_bergylta
ENSNBRG00000008848	-	86	64.800	ENSLACG00000010998	-	72	64.800	Latimeria_chalumnae
ENSNBRG00000008848	-	98	56.738	ENSMZEG00005026198	-	67	63.115	Maylandia_zebra
ENSNBRG00000008848	-	99	91.608	ENSMZEG00005007838	-	84	91.608	Maylandia_zebra
ENSNBRG00000008848	-	88	64.286	ENSMMOG00000014380	-	62	64.286	Mola_mola
ENSNBRG00000008848	-	78	75.410	ENSMMOG00000003228	-	69	75.410	Mola_mola
ENSNBRG00000008848	-	85	62.295	ENSMALG00000015614	-	76	62.295	Monopterus_albus
ENSNBRG00000008848	-	99	70.629	ENSPKIG00000013061	-	70	73.228	Paramormyrops_kingsleyae
ENSNBRG00000008848	-	98	82.979	ENSPMGG00000017071	-	67	85.714	Periophthalmus_magnuspinnatus
ENSNBRG00000008848	-	69	71.717	ENSPMAG00000010266	-	53	71.717	Petromyzon_marinus
ENSNBRG00000008848	-	72	62.136	ENSPMAG00000003064	-	64	62.136	Petromyzon_marinus
ENSNBRG00000008848	-	76	84.545	ENSPLAG00000012690	-	65	84.545	Poecilia_latipinna
ENSNBRG00000008848	-	98	56.028	ENSPNYG00000006286	-	67	62.295	Pundamilia_nyererei
ENSNBRG00000008848	-	99	92.308	ENSPNYG00000012665	-	84	92.308	Pundamilia_nyererei
ENSNBRG00000008848	-	90	62.879	ENSPNAG00000021290	-	66	65.323	Pygocentrus_nattereri
ENSNBRG00000008848	-	69	49.000	YMR230W	RPS10B	93	49.000	Saccharomyces_cerevisiae
ENSNBRG00000008848	-	69	50.000	YOR293W	RPS10A	93	50.000	Saccharomyces_cerevisiae
ENSNBRG00000008848	-	99	66.901	ENSSFOG00015009603	-	62	73.387	Scleropages_formosus
ENSNBRG00000008848	-	74	73.148	ENSSFOG00015012004	-	61	73.148	Scleropages_formosus
ENSNBRG00000008848	-	87	65.600	ENSSDUG00000011052	-	75	65.600	Seriola_dumerili
ENSNBRG00000008848	-	92	91.729	ENSSDUG00000010997	-	75	92.857	Seriola_dumerili
ENSNBRG00000008848	-	97	88.489	ENSSLDG00000012473	-	81	92.063	Seriola_lalandi_dorsalis
ENSNBRG00000008848	-	98	60.284	ENSSLDG00000016257	-	68	64.800	Seriola_lalandi_dorsalis
ENSNBRG00000008848	-	67	69.792	ENSSPAG00000012512	-	50	69.792	Stegastes_partitus
ENSNBRG00000008848	-	80	81.897	ENSSPAG00000015615	-	91	81.897	Stegastes_partitus
ENSNBRG00000008848	-	69	73.737	ENSSSCG00000033521	-	61	73.737	Sus_scrofa
ENSNBRG00000008848	-	99	58.784	ENSXETG00000032983	-	66	65.873	Xenopus_tropicalis
ENSNBRG00000008848	-	99	85.211	ENSXCOG00000016917	-	78	88.095	Xiphophorus_couchianus
ENSNBRG00000008848	-	76	71.074	ENSXMAG00000029046	-	70	71.074	Xiphophorus_maculatus