EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000008930 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: si:dkey-16l2.16
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 6183 bases
Position: chrJH422358.1:119777-125959
Accession: ZDB-GENE-141219-36
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000011479	MMR_HSR1	PF01926.23	3.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000011802	-	1398	-	ENSNBRP00000011479	209 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000008930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000008930's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000008930	si:dkey-16l2.16	87	46.032	ENSNBRG00000022235	rab33a	72	46.512
ENSNBRG00000008930	si:dkey-16l2.16	77	39.634	ENSNBRG00000013673	rab6ba	79	39.634
ENSNBRG00000008930	si:dkey-16l2.16	92	45.361	ENSNBRG00000001056	rab15	82	48.276
ENSNBRG00000008930	si:dkey-16l2.16	82	45.087	ENSNBRG00000002778	RAB15	82	45.087
ENSNBRG00000008930	si:dkey-16l2.16	75	46.203	ENSNBRG00000011607	rab25a	75	46.203
ENSNBRG00000008930	si:dkey-16l2.16	73	33.974	ENSNBRG00000014613	si:ch73-116o1.2	82	31.977
ENSNBRG00000008930	si:dkey-16l2.16	98	41.827	ENSNBRG00000012893	rab11a	96	40.777
ENSNBRG00000008930	si:dkey-16l2.16	77	39.634	ENSNBRG00000015905	rab6bb	77	39.216
ENSNBRG00000008930	si:dkey-16l2.16	98	39.713	ENSNBRG00000000372	rab11bb	80	43.678
ENSNBRG00000008930	si:dkey-16l2.16	96	36.816	ENSNBRG00000018165	rab5c	72	42.405
ENSNBRG00000008930	si:dkey-16l2.16	99	51.691	ENSNBRG00000003873	rab1ba	81	61.111
ENSNBRG00000008930	si:dkey-16l2.16	80	37.572	ENSNBRG00000002772	-	83	37.572
ENSNBRG00000008930	si:dkey-16l2.16	84	38.462	ENSNBRG00000008714	RAB29	78	38.764
ENSNBRG00000008930	si:dkey-16l2.16	84	45.810	ENSNBRG00000008137	rab18b	84	46.821
ENSNBRG00000008930	si:dkey-16l2.16	96	33.654	ENSNBRG00000024340	RAB9A	74	39.375
ENSNBRG00000008930	si:dkey-16l2.16	98	38.462	ENSNBRG00000005116	rab11al	74	46.541
ENSNBRG00000008930	si:dkey-16l2.16	87	42.347	ENSNBRG00000002684	zgc:101559	79	42.935
ENSNBRG00000008930	si:dkey-16l2.16	100	34.419	ENSNBRG00000013940	rab9b	80	37.017
ENSNBRG00000008930	si:dkey-16l2.16	77	46.951	ENSNBRG00000018106	-	75	48.125
ENSNBRG00000008930	si:dkey-16l2.16	75	44.937	ENSNBRG00000011763	rab5aa	72	45.513
ENSNBRG00000008930	si:dkey-16l2.16	78	34.911	ENSNBRG00000002825	-	81	34.911
ENSNBRG00000008930	si:dkey-16l2.16	76	37.267	ENSNBRG00000004403	kras	88	34.524
ENSNBRG00000008930	si:dkey-16l2.16	78	42.073	ENSNBRG00000005542	-	76	42.073
ENSNBRG00000008930	si:dkey-16l2.16	100	40.000	ENSNBRG00000023898	rab11ba	69	43.333
ENSNBRG00000008930	si:dkey-16l2.16	77	46.951	ENSNBRG00000005082	RAB39B	75	48.125
ENSNBRG00000008930	si:dkey-16l2.16	80	37.572	ENSNBRG00000021829	RAB7A	83	37.572
ENSNBRG00000008930	si:dkey-16l2.16	74	34.161	ENSNBRG00000022552	dnajc27	59	34.161
ENSNBRG00000008930	si:dkey-16l2.16	83	32.402	ENSNBRG00000016978	rhebl1	89	33.533
ENSNBRG00000008930	si:dkey-16l2.16	73	36.250	ENSNBRG00000007544	rab32b	73	36.250
ENSNBRG00000008930	si:dkey-16l2.16	77	43.902	ENSNBRG00000021487	rab42a	62	43.902
ENSNBRG00000008930	si:dkey-16l2.16	73	31.613	ENSNBRG00000001521	-	74	31.613
ENSNBRG00000008930	si:dkey-16l2.16	55	46.552	ENSNBRG00000011872	-	58	46.552
ENSNBRG00000008930	si:dkey-16l2.16	90	56.842	ENSNBRG00000006202	zgc:171927	76	63.354
ENSNBRG00000008930	si:dkey-16l2.16	53	35.714	ENSNBRG00000002346	RAP2B	93	35.484
ENSNBRG00000008930	si:dkey-16l2.16	55	30.172	ENSNBRG00000007962	arl3	61	30.172
ENSNBRG00000008930	si:dkey-16l2.16	79	40.120	ENSNBRG00000016922	-	75	40.120
ENSNBRG00000008930	si:dkey-16l2.16	78	42.424	ENSNBRG00000014428	rab12	69	41.916
ENSNBRG00000008930	si:dkey-16l2.16	69	48.026	ENSNBRG00000017996	-	66	48.026
ENSNBRG00000008930	si:dkey-16l2.16	79	30.939	ENSNBRG00000011713	rasl11a	69	31.492
ENSNBRG00000008930	si:dkey-16l2.16	88	32.461	ENSNBRG00000017793	RAB17	69	35.897
ENSNBRG00000008930	si:dkey-16l2.16	77	40.244	ENSNBRG00000016716	rab6a	74	40.260
ENSNBRG00000008930	si:dkey-16l2.16	81	50.000	ENSNBRG00000004124	rab13	85	50.000
ENSNBRG00000008930	si:dkey-16l2.16	73	48.387	ENSNBRG00000013507	rab18a	75	48.387
ENSNBRG00000008930	si:dkey-16l2.16	98	38.571	ENSNBRG00000001241	rab2a	75	46.541
ENSNBRG00000008930	si:dkey-16l2.16	78	43.293	ENSNBRG00000002726	-	76	43.293
ENSNBRG00000008930	si:dkey-16l2.16	73	41.558	ENSNBRG00000022702	rab41	73	41.558
ENSNBRG00000008930	si:dkey-16l2.16	78	36.095	ENSNBRG00000013795	rheb	88	36.095
ENSNBRG00000008930	si:dkey-16l2.16	98	40.191	ENSNBRG00000023885	-	80	43.678
ENSNBRG00000008930	si:dkey-16l2.16	69	47.973	ENSNBRG00000007077	rab33ba	58	47.973
ENSNBRG00000008930	si:dkey-16l2.16	77	61.728	ENSNBRG00000020492	-	79	62.500
ENSNBRG00000008930	si:dkey-16l2.16	74	38.994	ENSNBRG00000023214	si:dkey-13a21.4	77	38.994
ENSNBRG00000008930	si:dkey-16l2.16	67	34.043	ENSNBRG00000013691	rab23	78	33.125
ENSNBRG00000008930	si:dkey-16l2.16	95	34.597	ENSNBRG00000019750	rab34a	65	37.870
ENSNBRG00000008930	si:dkey-16l2.16	87	47.253	ENSNBRG00000002082	rab30	81	47.191

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000008930	si:dkey-16l2.16	100	94.258	ENSAPOG00000008263	si:dkey-16l2.16	100	94.258	Acanthochromis_polyacanthus
ENSNBRG00000008930	si:dkey-16l2.16	100	95.215	ENSAOCG00000016825	si:dkey-16l2.16	100	95.215	Amphiprion_ocellaris
ENSNBRG00000008930	si:dkey-16l2.16	100	95.215	ENSAPEG00000006500	si:dkey-16l2.16	100	95.215	Amphiprion_percula
ENSNBRG00000008930	si:dkey-16l2.16	100	94.737	ENSATEG00000019238	si:dkey-16l2.16	100	94.737	Anabas_testudineus
ENSNBRG00000008930	si:dkey-16l2.16	100	98.565	ENSACLG00000018721	si:dkey-16l2.16	100	98.565	Astatotilapia_calliptera
ENSNBRG00000008930	si:dkey-16l2.16	100	95.215	ENSAMXG00000038243	si:dkey-16l2.16	100	95.215	Astyanax_mexicanus
ENSNBRG00000008930	si:dkey-16l2.16	56	98.305	ENSCSEG00000009988	si:dkey-16l2.16	90	98.305	Cynoglossus_semilaevis
ENSNBRG00000008930	si:dkey-16l2.16	100	93.780	ENSCVAG00000003537	si:dkey-16l2.16	100	93.780	Cyprinodon_variegatus
ENSNBRG00000008930	si:dkey-16l2.16	100	92.344	ENSDARG00000037967	si:dkey-16l2.16	99	97.458	Danio_rerio
ENSNBRG00000008930	si:dkey-16l2.16	99	87.500	ENSELUG00000023247	si:dkey-16l2.16	99	86.538	Esox_lucius
ENSNBRG00000008930	si:dkey-16l2.16	58	94.215	ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	Fundulus_heteroclitus
ENSNBRG00000008930	si:dkey-16l2.16	77	85.093	ENSGMOG00000015174	si:dkey-16l2.16	98	85.093	Gadus_morhua
ENSNBRG00000008930	si:dkey-16l2.16	100	88.038	ENSGAFG00000005388	si:dkey-16l2.16	100	88.038	Gambusia_affinis
ENSNBRG00000008930	si:dkey-16l2.16	100	94.258	ENSGACG00000014915	si:dkey-16l2.16	98	94.258	Gasterosteus_aculeatus
ENSNBRG00000008930	si:dkey-16l2.16	100	99.043	ENSHBUG00000019261	si:dkey-16l2.16	100	99.043	Haplochromis_burtoni
ENSNBRG00000008930	si:dkey-16l2.16	100	93.780	ENSHCOG00000006538	si:dkey-16l2.16	100	93.780	Hippocampus_comes
ENSNBRG00000008930	si:dkey-16l2.16	100	90.909	ENSKMAG00000003494	si:dkey-16l2.16	100	90.909	Kryptolebias_marmoratus
ENSNBRG00000008930	si:dkey-16l2.16	100	94.737	ENSLBEG00000007681	si:dkey-16l2.16	100	94.737	Labrus_bergylta
ENSNBRG00000008930	si:dkey-16l2.16	100	94.258	ENSMAMG00000019230	si:dkey-16l2.16	100	94.258	Mastacembelus_armatus
ENSNBRG00000008930	si:dkey-16l2.16	100	98.565	ENSMZEG00005002081	si:dkey-16l2.16	100	98.565	Maylandia_zebra
ENSNBRG00000008930	si:dkey-16l2.16	99	94.660	ENSMMOG00000020140	si:dkey-16l2.16	97	94.660	Mola_mola
ENSNBRG00000008930	si:dkey-16l2.16	100	93.780	ENSMALG00000014727	si:dkey-16l2.16	99	93.780	Monopterus_albus
ENSNBRG00000008930	si:dkey-16l2.16	100	98.565	ENSONIG00000009443	si:dkey-16l2.16	100	98.565	Oreochromis_niloticus
ENSNBRG00000008930	si:dkey-16l2.16	100	88.517	ENSORLG00000001098	si:dkey-16l2.16	99	88.517	Oryzias_latipes
ENSNBRG00000008930	si:dkey-16l2.16	100	88.517	ENSORLG00020000867	si:dkey-16l2.16	99	88.517	Oryzias_latipes_hni
ENSNBRG00000008930	si:dkey-16l2.16	100	87.560	ENSOMEG00000015474	si:dkey-16l2.16	100	87.081	Oryzias_melastigma
ENSNBRG00000008930	si:dkey-16l2.16	100	94.258	ENSPKIG00000005686	-	100	94.258	Paramormyrops_kingsleyae
ENSNBRG00000008930	si:dkey-16l2.16	100	79.426	ENSPKIG00000018888	si:dkey-16l2.16	94	82.143	Paramormyrops_kingsleyae
ENSNBRG00000008930	si:dkey-16l2.16	100	92.823	ENSPMGG00000000751	si:dkey-16l2.16	100	92.823	Periophthalmus_magnuspinnatus
ENSNBRG00000008930	si:dkey-16l2.16	100	88.517	ENSPFOG00000004746	si:dkey-16l2.16	100	88.517	Poecilia_formosa
ENSNBRG00000008930	si:dkey-16l2.16	100	88.038	ENSPLAG00000021043	si:dkey-16l2.16	100	88.038	Poecilia_latipinna
ENSNBRG00000008930	si:dkey-16l2.16	100	88.517	ENSPMEG00000007165	si:dkey-16l2.16	100	88.517	Poecilia_mexicana
ENSNBRG00000008930	si:dkey-16l2.16	100	88.038	ENSPREG00000005323	si:dkey-16l2.16	100	88.038	Poecilia_reticulata
ENSNBRG00000008930	si:dkey-16l2.16	100	99.043	ENSPNYG00000009490	si:dkey-16l2.16	100	99.043	Pundamilia_nyererei
ENSNBRG00000008930	si:dkey-16l2.16	100	94.737	ENSPNAG00000018986	si:dkey-16l2.16	100	94.737	Pygocentrus_nattereri
ENSNBRG00000008930	si:dkey-16l2.16	100	92.823	ENSSFOG00015021448	-	100	92.823	Scleropages_formosus
ENSNBRG00000008930	si:dkey-16l2.16	99	82.212	ENSSFOG00015006414	-	85	85.311	Scleropages_formosus
ENSNBRG00000008930	si:dkey-16l2.16	100	89.952	ENSSMAG00000011769	si:dkey-16l2.16	94	89.952	Scophthalmus_maximus
ENSNBRG00000008930	si:dkey-16l2.16	100	95.694	ENSSDUG00000005719	si:dkey-16l2.16	100	95.694	Seriola_dumerili
ENSNBRG00000008930	si:dkey-16l2.16	100	95.694	ENSSLDG00000003631	si:dkey-16l2.16	100	95.694	Seriola_lalandi_dorsalis
ENSNBRG00000008930	si:dkey-16l2.16	100	95.215	ENSSPAG00000006302	si:dkey-16l2.16	100	95.215	Stegastes_partitus
ENSNBRG00000008930	si:dkey-16l2.16	100	94.737	ENSTRUG00000025076	si:dkey-16l2.16	100	94.737	Takifugu_rubripes
ENSNBRG00000008930	si:dkey-16l2.16	100	94.737	ENSTNIG00000011300	si:dkey-16l2.16	100	94.737	Tetraodon_nigroviridis
ENSNBRG00000008930	si:dkey-16l2.16	100	88.517	ENSXMAG00000021767	si:dkey-16l2.16	100	88.517	Xiphophorus_maculatus