EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000008974 (Gene tree)
Gene ID: -
Gene Symbol: sall3a
Alias: sall3
Full Name: sal-like protein 3-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 4544 bases
Position: chrJH422307.1:2701898-2706441
Accession: 102796582
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000011513	zf-C2H2	PF00096.26	6.1e-25	1	5
ENSNBRP00000011513	zf-C2H2	PF00096.26	6.1e-25	2	5
ENSNBRP00000011513	zf-C2H2	PF00096.26	6.1e-25	3	5
ENSNBRP00000011513	zf-C2H2	PF00096.26	6.1e-25	4	5
ENSNBRP00000011513	zf-C2H2	PF00096.26	6.1e-25	5	5
ENSNBRP00000011513	zf-met	PF12874.7	1.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000011836	-	3849	XM_006794866	ENSNBRP00000011513	1282 (aa)	XP_006794929	-

Gene Model

Click here to download ENSNBRG00000008974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000008974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000008974	sall3a	71	50.665	ENSNBRG00000009307	sall1a	75	51.366
ENSNBRG00000008974	sall3a	70	43.545	ENSNBRG00000001829	sall4	85	62.745
ENSNBRG00000008974	sall3a	50	55.000	ENSNBRG00000003124	-	83	55.102
ENSNBRG00000008974	sall3a	73	65.000	ENSNBRG00000016034	sall3b	95	65.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000008974	sall3a	74	76.000	ENSG00000256463	SALL3	96	68.811	Homo_sapiens
ENSNBRG00000008974	sall3a	100	91.261	ENSAPOG00000020922	sall3a	97	91.183	Acanthochromis_polyacanthus
ENSNBRG00000008974	sall3a	99	52.973	ENSAPOG00000004264	sall3b	70	58.523	Acanthochromis_polyacanthus
ENSNBRG00000008974	sall3a	72	63.410	ENSAMEG00000010206	SALL3	75	64.278	Ailuropoda_melanoleuca
ENSNBRG00000008974	sall3a	84	94.801	ENSACIG00000014041	sall3a	98	94.801	Amphilophus_citrinellus
ENSNBRG00000008974	sall3a	74	60.465	ENSACIG00000019407	sall3b	96	60.465	Amphilophus_citrinellus
ENSNBRG00000008974	sall3a	99	52.995	ENSAOCG00000012779	sall3b	69	58.849	Amphiprion_ocellaris
ENSNBRG00000008974	sall3a	100	91.846	ENSAOCG00000010863	sall3a	97	91.846	Amphiprion_ocellaris
ENSNBRG00000008974	sall3a	74	58.333	ENSAPEG00000018170	sall3b	98	58.089	Amphiprion_percula
ENSNBRG00000008974	sall3a	100	90.061	ENSAPEG00000019278	sall3a	97	90.061	Amphiprion_percula
ENSNBRG00000008974	sall3a	70	58.190	ENSATEG00000004914	sall3b	69	58.602	Anabas_testudineus
ENSNBRG00000008974	sall3a	99	88.365	ENSATEG00000024524	sall3a	98	97.436	Anabas_testudineus
ENSNBRG00000008974	sall3a	100	62.386	ENSAPLG00000013214	SALL3	99	63.519	Anas_platyrhynchos
ENSNBRG00000008974	sall3a	100	62.794	ENSACAG00000000478	SALL3	70	70.842	Anolis_carolinensis
ENSNBRG00000008974	sall3a	90	65.109	ENSANAG00000032412	SALL3	89	66.559	Aotus_nancymaae
ENSNBRG00000008974	sall3a	100	95.372	ENSACLG00000022451	sall3a	99	97.228	Astatotilapia_calliptera
ENSNBRG00000008974	sall3a	70	57.742	ENSACLG00000001619	sall3b	69	58.199	Astatotilapia_calliptera
ENSNBRG00000008974	sall3a	84	91.525	ENSAMXG00000011185	sall3a	98	91.525	Astyanax_mexicanus
ENSNBRG00000008974	sall3a	66	65.577	ENSAMXG00000035442	sall3b	97	57.143	Astyanax_mexicanus
ENSNBRG00000008974	sall3a	74	76.471	ENSBTAG00000050200	SALL3	96	70.492	Bos_taurus
ENSNBRG00000008974	sall3a	71	68.298	ENSCJAG00000007332	SALL3	71	68.879	Callithrix_jacchus
ENSNBRG00000008974	sall3a	72	67.641	ENSCAFG00000000013	SALL3	78	68.797	Canis_familiaris
ENSNBRG00000008974	sall3a	72	64.236	ENSCAFG00020015092	SALL3	79	65.204	Canis_lupus_dingo
ENSNBRG00000008974	sall3a	89	62.636	ENSCHIG00000000145	SALL3	73	64.097	Capra_hircus
ENSNBRG00000008974	sall3a	73	66.050	ENSTSYG00000028846	SALL3	99	67.176	Carlito_syrichta
ENSNBRG00000008974	sall3a	84	72.131	ENSCAPG00000006496	SALL3	93	72.131	Cavia_aperea
ENSNBRG00000008974	sall3a	65	78.346	ENSCATG00000029727	SALL3	96	73.214	Cercocebus_atys
ENSNBRG00000008974	sall3a	72	68.206	ENSCLAG00000007727	SALL3	73	69.197	Chinchilla_lanigera
ENSNBRG00000008974	sall3a	71	64.623	ENSCSAG00000018244	SALL3	72	65.195	Chlorocebus_sabaeus
ENSNBRG00000008974	sall3a	63	70.042	ENSCHOG00000013939	-	91	70.042	Choloepus_hoffmanni
ENSNBRG00000008974	sall3a	100	63.166	ENSCPBG00000003657	SALL3	70	70.607	Chrysemys_picta_bellii
ENSNBRG00000008974	sall3a	74	75.000	ENSCANG00000030302	SALL3	99	75.000	Colobus_angolensis_palliatus
ENSNBRG00000008974	sall3a	99	60.816	ENSCGRG00001018203	Sall3	70	69.447	Cricetulus_griseus_chok1gshd
ENSNBRG00000008974	sall3a	99	60.431	ENSCGRG00000017127	Sall3	72	69.014	Cricetulus_griseus_crigri
ENSNBRG00000008974	sall3a	100	86.657	ENSCSEG00000009058	sall3a	97	86.657	Cynoglossus_semilaevis
ENSNBRG00000008974	sall3a	73	65.000	ENSCSEG00000009569	sall3b	96	65.000	Cynoglossus_semilaevis
ENSNBRG00000008974	sall3a	84	90.625	ENSCVAG00000009684	sall3a	94	90.625	Cyprinodon_variegatus
ENSNBRG00000008974	sall3a	100	46.931	ENSCVAG00000017005	sall3b	91	72.941	Cyprinodon_variegatus
ENSNBRG00000008974	sall3a	100	66.591	ENSDARG00000079613	sall3a	69	70.588	Danio_rerio
ENSNBRG00000008974	sall3a	100	51.964	ENSDARG00000057586	sall3b	69	56.850	Danio_rerio
ENSNBRG00000008974	sall3a	71	62.613	ENSDNOG00000025483	SALL3	96	63.292	Dasypus_novemcinctus
ENSNBRG00000008974	sall3a	70	63.121	ENSDORG00000002702	Sall3	87	64.074	Dipodomys_ordii
ENSNBRG00000008974	sall3a	74	60.077	ENSETEG00000001481	SALL3	92	62.538	Echinops_telfairi
ENSNBRG00000008974	sall3a	100	60.942	ENSEASG00005002071	SALL3	70	69.156	Equus_asinus_asinus
ENSNBRG00000008974	sall3a	100	60.879	ENSECAG00000015414	SALL3	70	68.939	Equus_caballus
ENSNBRG00000008974	sall3a	99	52.580	ENSELUG00000009541	sall3b	69	59.184	Esox_lucius
ENSNBRG00000008974	sall3a	100	75.934	ENSELUG00000020351	sall3a	99	76.027	Esox_lucius
ENSNBRG00000008974	sall3a	70	75.200	ENSFCAG00000028839	SALL3	70	75.200	Felis_catus
ENSNBRG00000008974	sall3a	100	62.281	ENSFALG00000013343	SALL3	70	70.022	Ficedula_albicollis
ENSNBRG00000008974	sall3a	72	67.619	ENSFDAG00000014697	SALL3	72	68.547	Fukomys_damarensis
ENSNBRG00000008974	sall3a	100	80.184	ENSGMOG00000006649	sall3a	99	80.184	Gadus_morhua
ENSNBRG00000008974	sall3a	100	62.614	ENSGALG00000041404	SALL3	95	63.402	Gallus_gallus
ENSNBRG00000008974	sall3a	69	49.333	ENSGAFG00000014435	-	79	61.224	Gambusia_affinis
ENSNBRG00000008974	sall3a	100	87.016	ENSGAFG00000001581	sall3a	96	93.750	Gambusia_affinis
ENSNBRG00000008974	sall3a	100	82.013	ENSGACG00000005503	sall3a	99	81.569	Gasterosteus_aculeatus
ENSNBRG00000008974	sall3a	100	48.897	ENSGACG00000002533	sall3b	73	53.952	Gasterosteus_aculeatus
ENSNBRG00000008974	sall3a	100	62.909	ENSGAGG00000000925	SALL3	70	70.390	Gopherus_agassizii
ENSNBRG00000008974	sall3a	74	75.000	ENSGGOG00000008127	SALL3	96	75.000	Gorilla_gorilla
ENSNBRG00000008974	sall3a	99	99.766	ENSHBUG00000004486	sall3a	100	99.766	Haplochromis_burtoni
ENSNBRG00000008974	sall3a	73	65.000	ENSHBUG00000018127	sall3b	95	65.000	Haplochromis_burtoni
ENSNBRG00000008974	sall3a	100	60.212	ENSHGLG00000000824	SALL3	71	69.314	Heterocephalus_glaber_female
ENSNBRG00000008974	sall3a	100	58.681	ENSHGLG00100008694	SALL3	72	69.314	Heterocephalus_glaber_male
ENSNBRG00000008974	sall3a	98	63.462	ENSHCOG00000004745	sall3b	69	63.462	Hippocampus_comes
ENSNBRG00000008974	sall3a	95	86.397	ENSHCOG00000010423	sall3a	99	91.525	Hippocampus_comes
ENSNBRG00000008974	sall3a	100	72.741	ENSIPUG00000003378	sall3	97	72.967	Ictalurus_punctatus
ENSNBRG00000008974	sall3a	84	63.462	ENSIPUG00000003006	sall3b	70	51.688	Ictalurus_punctatus
ENSNBRG00000008974	sall3a	100	60.714	ENSSTOG00000004145	SALL3	71	69.197	Ictidomys_tridecemlineatus
ENSNBRG00000008974	sall3a	99	57.879	ENSJJAG00000014351	Sall3	97	58.497	Jaculus_jaculus
ENSNBRG00000008974	sall3a	100	87.709	ENSKMAG00000003846	sall3a	99	93.443	Kryptolebias_marmoratus
ENSNBRG00000008974	sall3a	80	64.103	ENSLBEG00000015706	sall3b	94	64.103	Labrus_bergylta
ENSNBRG00000008974	sall3a	100	87.405	ENSLBEG00000005152	sall3a	97	87.405	Labrus_bergylta
ENSNBRG00000008974	sall3a	100	69.266	ENSLOCG00000007831	sall3a	70	75.644	Lepisosteus_oculatus
ENSNBRG00000008974	sall3a	100	60.597	ENSLAFG00000013521	SALL3	73	66.769	Loxodonta_africana
ENSNBRG00000008974	sall3a	76	72.881	ENSMFAG00000031402	SALL3	95	65.092	Macaca_fascicularis
ENSNBRG00000008974	sall3a	76	72.881	ENSMMUG00000000286	SALL3	88	65.195	Macaca_mulatta
ENSNBRG00000008974	sall3a	62	78.346	ENSMNEG00000029916	SALL3	73	65.092	Macaca_nemestrina
ENSNBRG00000008974	sall3a	83	56.489	ENSMAMG00000006101	sall3b	96	56.438	Mastacembelus_armatus
ENSNBRG00000008974	sall3a	70	57.742	ENSMZEG00005026224	sall3b	69	58.307	Maylandia_zebra
ENSNBRG00000008974	sall3a	100	95.372	ENSMZEG00005007586	sall3a	99	97.228	Maylandia_zebra
ENSNBRG00000008974	sall3a	100	62.842	ENSMGAG00000002297	SALL3	97	63.629	Meleagris_gallopavo
ENSNBRG00000008974	sall3a	99	60.322	ENSMAUG00000011828	Sall3	70	69.447	Mesocricetus_auratus
ENSNBRG00000008974	sall3a	74	67.865	ENSMICG00000017395	SALL3	96	68.559	Microcebus_murinus
ENSNBRG00000008974	sall3a	99	59.708	ENSMOCG00000013205	Sall3	70	69.598	Microtus_ochrogaster
ENSNBRG00000008974	sall3a	82	61.224	ENSMMOG00000014246	sall3b	97	61.224	Mola_mola
ENSNBRG00000008974	sall3a	75	90.625	ENSMMOG00000003253	sall3a	98	90.625	Mola_mola
ENSNBRG00000008974	sall3a	100	63.098	ENSMODG00000012231	SALL3	70	70.098	Monodelphis_domestica
ENSNBRG00000008974	sall3a	69	56.263	ENSMALG00000015200	sall3b	68	55.949	Monopterus_albus
ENSNBRG00000008974	sall3a	99	89.722	ENSMALG00000003343	sall3a	99	89.722	Monopterus_albus
ENSNBRG00000008974	sall3a	100	61.153	MGP_CAROLIEiJ_G0022442	Sall3	70	69.881	Mus_caroli
ENSNBRG00000008974	sall3a	100	61.002	ENSMUSG00000024565	Sall3	70	69.772	Mus_musculus
ENSNBRG00000008974	sall3a	100	61.305	MGP_PahariEiJ_G0019170	Sall3	70	69.989	Mus_pahari
ENSNBRG00000008974	sall3a	100	60.955	MGP_SPRETEiJ_G0023357	Sall3	70	69.881	Mus_spretus
ENSNBRG00000008974	sall3a	85	61.947	ENSMPUG00000016646	SALL3	76	68.634	Mustela_putorius_furo
ENSNBRG00000008974	sall3a	99	58.449	ENSMLUG00000010582	SALL3	73	65.138	Myotis_lucifugus
ENSNBRG00000008974	sall3a	100	60.304	ENSNGAG00000023772	Sall3	88	65.670	Nannospalax_galili
ENSNBRG00000008974	sall3a	74	75.000	ENSNLEG00000008217	SALL3	96	75.000	Nomascus_leucogenys
ENSNBRG00000008974	sall3a	94	72.464	ENSODEG00000002692	SALL3	73	66.460	Octodon_degus
ENSNBRG00000008974	sall3a	100	90.567	ENSONIG00000007305	sall3a	97	90.644	Oreochromis_niloticus
ENSNBRG00000008974	sall3a	69	57.484	ENSONIG00000013791	sall3b	69	57.923	Oreochromis_niloticus
ENSNBRG00000008974	sall3a	52	65.920	ENSOANG00000010135	-	100	66.080	Ornithorhynchus_anatinus
ENSNBRG00000008974	sall3a	72	64.577	ENSOCUG00000029398	SALL3	79	66.559	Oryctolagus_cuniculus
ENSNBRG00000008974	sall3a	92	61.538	ENSOCUG00000004364	-	83	53.007	Oryctolagus_cuniculus
ENSNBRG00000008974	sall3a	100	84.885	ENSORLG00000020718	sall3a	97	85.649	Oryzias_latipes
ENSNBRG00000008974	sall3a	100	85.265	ENSORLG00020001794	sall3a	99	86.034	Oryzias_latipes_hni
ENSNBRG00000008974	sall3a	83	63.462	ENSORLG00020015105	sall3b	56	63.462	Oryzias_latipes_hni
ENSNBRG00000008974	sall3a	100	85.265	ENSORLG00015018152	sall3a	97	88.559	Oryzias_latipes_hsok
ENSNBRG00000008974	sall3a	73	63.462	ENSORLG00015005877	sall3b	81	74.706	Oryzias_latipes_hsok
ENSNBRG00000008974	sall3a	100	85.053	ENSOMEG00000011390	sall3a	97	85.205	Oryzias_melastigma
ENSNBRG00000008974	sall3a	70	65.066	ENSOGAG00000031681	SALL3	73	65.711	Otolemur_garnettii
ENSNBRG00000008974	sall3a	78	67.532	ENSOARG00000004353	SALL3	94	62.280	Ovis_aries
ENSNBRG00000008974	sall3a	74	75.926	ENSPPAG00000029586	-	97	75.926	Pan_paniscus
ENSNBRG00000008974	sall3a	74	75.000	ENSPTRG00000010126	SALL3	96	75.000	Pan_troglodytes
ENSNBRG00000008974	sall3a	76	72.881	ENSPANG00000006485	SALL3	97	75.000	Papio_anubis
ENSNBRG00000008974	sall3a	97	84.615	ENSPKIG00000013427	sall3a	66	84.615	Paramormyrops_kingsleyae
ENSNBRG00000008974	sall3a	100	61.206	ENSPKIG00000018271	SALL3	96	77.551	Paramormyrops_kingsleyae
ENSNBRG00000008974	sall3a	100	62.814	ENSPSIG00000008556	SALL3	76	71.709	Pelodiscus_sinensis
ENSNBRG00000008974	sall3a	74	55.932	ENSPMGG00000002913	sall3b	96	56.897	Periophthalmus_magnuspinnatus
ENSNBRG00000008974	sall3a	100	83.168	ENSPMGG00000017042	sall3a	97	82.938	Periophthalmus_magnuspinnatus
ENSNBRG00000008974	sall3a	99	57.837	ENSPEMG00000022799	Sall3	72	66.122	Peromyscus_maniculatus_bairdii
ENSNBRG00000008974	sall3a	100	62.357	ENSPCIG00000002472	SALL3	69	70.314	Phascolarctos_cinereus
ENSNBRG00000008974	sall3a	70	49.129	ENSPFOG00000013292	sall3b	74	48.743	Poecilia_formosa
ENSNBRG00000008974	sall3a	100	86.762	ENSPFOG00000019127	sall3a	97	86.687	Poecilia_formosa
ENSNBRG00000008974	sall3a	70	48.743	ENSPLAG00000013919	sall3b	70	48.637	Poecilia_latipinna
ENSNBRG00000008974	sall3a	100	86.536	ENSPLAG00000018123	sall3a	98	93.750	Poecilia_latipinna
ENSNBRG00000008974	sall3a	74	48.845	ENSPMEG00000023703	sall3b	64	87.500	Poecilia_mexicana
ENSNBRG00000008974	sall3a	89	85.847	ENSPMEG00000014946	sall3a	93	85.763	Poecilia_mexicana
ENSNBRG00000008974	sall3a	94	81.752	ENSPREG00000014420	sall3a	92	85.085	Poecilia_reticulata
ENSNBRG00000008974	sall3a	99	44.915	ENSPREG00000015079	sall3b	70	49.125	Poecilia_reticulata
ENSNBRG00000008974	sall3a	100	59.855	ENSPCAG00000006522	SALL3	73	66.020	Procavia_capensis
ENSNBRG00000008974	sall3a	74	67.714	ENSPCOG00000012553	SALL3	96	68.004	Propithecus_coquereli
ENSNBRG00000008974	sall3a	100	48.205	ENSPVAG00000014645	SALL3	73	53.237	Pteropus_vampyrus
ENSNBRG00000008974	sall3a	100	99.610	ENSPNYG00000012783	sall3a	100	99.610	Pundamilia_nyererei
ENSNBRG00000008974	sall3a	73	65.000	ENSPNYG00000005353	sall3b	95	65.000	Pundamilia_nyererei
ENSNBRG00000008974	sall3a	100	50.675	ENSPNAG00000017141	sall3b	70	54.526	Pygocentrus_nattereri
ENSNBRG00000008974	sall3a	88	61.097	ENSRNOG00000026116	Sall3	80	66.224	Rattus_norvegicus
ENSNBRG00000008974	sall3a	77	72.881	ENSRBIG00000036190	SALL3	86	65.155	Rhinopithecus_bieti
ENSNBRG00000008974	sall3a	77	72.881	ENSRROG00000034130	SALL3	97	75.000	Rhinopithecus_roxellana
ENSNBRG00000008974	sall3a	82	72.727	ENSSBOG00000023380	SALL3	98	72.727	Saimiri_boliviensis_boliviensis
ENSNBRG00000008974	sall3a	100	61.905	ENSSHAG00000015872	SALL3	70	70.423	Sarcophilus_harrisii
ENSNBRG00000008974	sall3a	99	69.367	ENSSFOG00015012223	sall3a	99	92.857	Scleropages_formosus
ENSNBRG00000008974	sall3a	100	62.920	ENSSFOG00015009159	SALL3	96	82.759	Scleropages_formosus
ENSNBRG00000008974	sall3a	100	88.628	ENSSMAG00000007674	sall3a	97	88.628	Scophthalmus_maximus
ENSNBRG00000008974	sall3a	99	52.187	ENSSMAG00000019762	sall3b	70	57.968	Scophthalmus_maximus
ENSNBRG00000008974	sall3a	100	89.311	ENSSDUG00000011099	sall3a	97	89.311	Seriola_dumerili
ENSNBRG00000008974	sall3a	74	62.000	ENSSDUG00000010584	sall3b	98	62.000	Seriola_dumerili
ENSNBRG00000008974	sall3a	99	53.384	ENSSLDG00000016800	sall3b	70	58.521	Seriola_lalandi_dorsalis
ENSNBRG00000008974	sall3a	100	89.078	ENSSLDG00000012706	sall3a	97	89.078	Seriola_lalandi_dorsalis
ENSNBRG00000008974	sall3a	73	62.222	ENSSPAG00000003172	sall3b	97	58.397	Stegastes_partitus
ENSNBRG00000008974	sall3a	92	96.386	ENSSPAG00000013114	sall3a	97	95.686	Stegastes_partitus
ENSNBRG00000008974	sall3a	100	57.425	ENSSSCG00000004858	SALL3	72	62.436	Sus_scrofa
ENSNBRG00000008974	sall3a	100	60.379	ENSTGUG00000006541	SALL3	71	66.702	Taeniopygia_guttata
ENSNBRG00000008974	sall3a	75	94.643	ENSTRUG00000017423	sall3a	99	94.643	Takifugu_rubripes
ENSNBRG00000008974	sall3a	60	80.811	ENSTNIG00000001257	sall3a	97	78.928	Tetraodon_nigroviridis
ENSNBRG00000008974	sall3a	60	65.414	ENSTBEG00000008964	SALL3	53	66.303	Tupaia_belangeri
ENSNBRG00000008974	sall3a	72	61.470	ENSTTRG00000004958	SALL3	86	61.813	Tursiops_truncatus
ENSNBRG00000008974	sall3a	73	84.444	ENSUAMG00000016908	SALL3	96	79.630	Ursus_americanus
ENSNBRG00000008974	sall3a	72	85.714	ENSVVUG00000018838	SALL3	99	80.645	Vulpes_vulpes
ENSNBRG00000008974	sall3a	100	62.246	ENSXETG00000000845	sall3	69	70.398	Xenopus_tropicalis
ENSNBRG00000008974	sall3a	66	66.667	ENSXCOG00000018799	sall3b	97	66.667	Xiphophorus_couchianus
ENSNBRG00000008974	sall3a	100	84.558	ENSXCOG00000016907	sall3a	97	85.004	Xiphophorus_couchianus
ENSNBRG00000008974	sall3a	100	86.168	ENSXMAG00000023447	sall3a	97	86.092	Xiphophorus_maculatus
ENSNBRG00000008974	sall3a	89	58.065	ENSXMAG00000000798	sall3b	94	51.459	Xiphophorus_maculatus