EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000009067 (Gene tree)
Gene ID: -
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: protein SCAF8-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 22925 bases
Position: chrJH422346.1:2351679-2374603
Accession: 102790778
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000011664	RRM_1	PF00076.22	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000011995	SCAF8-201	3297	XM_006800685	ENSNBRP00000011664	1098 (aa)	XP_006800748	-

Gene Model

Click here to download ENSNBRG00000009067's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000009067's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000009067	SCAF8	100	52.746	ENSG00000213079	SCAF8	100	52.810	Homo_sapiens
ENSNBRG00000009067	SCAF8	99	83.090	ENSAPOG00000015527	SCAF8	87	81.649	Acanthochromis_polyacanthus
ENSNBRG00000009067	SCAF8	100	51.750	ENSAMEG00000007583	SCAF8	97	51.742	Ailuropoda_melanoleuca
ENSNBRG00000009067	SCAF8	99	82.724	ENSAOCG00000002421	SCAF8	87	80.936	Amphiprion_ocellaris
ENSNBRG00000009067	SCAF8	97	79.223	ENSAPEG00000020115	SCAF8	56	80.737	Amphiprion_percula
ENSNBRG00000009067	SCAF8	94	82.228	ENSATEG00000006959	SCAF8	96	82.228	Anabas_testudineus
ENSNBRG00000009067	SCAF8	100	63.194	ENSAPLG00000005765	SCAF8	97	63.036	Anas_platyrhynchos
ENSNBRG00000009067	SCAF8	51	58.750	ENSACAG00000005282	SCAF8	82	69.149	Anolis_carolinensis
ENSNBRG00000009067	SCAF8	100	52.746	ENSANAG00000036184	SCAF8	96	63.084	Aotus_nancymaae
ENSNBRG00000009067	SCAF8	99	98.507	ENSACLG00000018828	SCAF8	87	98.507	Astatotilapia_calliptera
ENSNBRG00000009067	SCAF8	100	63.853	ENSBTAG00000031917	SCAF8	95	64.447	Bos_taurus
ENSNBRG00000009067	SCAF8	100	52.823	ENSCJAG00000012631	SCAF8	97	51.970	Callithrix_jacchus
ENSNBRG00000009067	SCAF8	99	52.103	ENSCAFG00000000570	SCAF8	96	63.357	Canis_familiaris
ENSNBRG00000009067	SCAF8	99	52.103	ENSCAFG00020015048	SCAF8	95	63.357	Canis_lupus_dingo
ENSNBRG00000009067	SCAF8	100	53.132	ENSCHIG00000025041	SCAF8	95	64.685	Capra_hircus
ENSNBRG00000009067	SCAF8	100	52.040	ENSTSYG00000010991	SCAF8	98	52.238	Carlito_syrichta
ENSNBRG00000009067	SCAF8	66	72.000	ENSCAPG00000003300	SCAF8	81	72.000	Cavia_aperea
ENSNBRG00000009067	SCAF8	100	47.691	ENSCPOG00000030311	-	97	63.384	Cavia_porcellus
ENSNBRG00000009067	SCAF8	99	46.215	ENSCPOG00000022216	-	99	46.311	Cavia_porcellus
ENSNBRG00000009067	SCAF8	100	63.201	ENSCCAG00000024952	SCAF8	96	63.201	Cebus_capucinus
ENSNBRG00000009067	SCAF8	100	63.084	ENSCATG00000035361	SCAF8	96	63.084	Cercocebus_atys
ENSNBRG00000009067	SCAF8	100	51.588	ENSCLAG00000004910	SCAF8	95	63.791	Chinchilla_lanigera
ENSNBRG00000009067	SCAF8	100	61.574	ENSCSAG00000013430	SCAF8	97	61.574	Chlorocebus_sabaeus
ENSNBRG00000009067	SCAF8	100	59.651	ENSCPBG00000016330	SCAF8	87	66.341	Chrysemys_picta_bellii
ENSNBRG00000009067	SCAF8	100	63.084	ENSCANG00000039499	SCAF8	96	62.884	Colobus_angolensis_palliatus
ENSNBRG00000009067	SCAF8	100	52.823	ENSCGRG00001020167	Scaf8	100	53.236	Cricetulus_griseus_chok1gshd
ENSNBRG00000009067	SCAF8	99	52.595	ENSCGRG00000004120	Scaf8	99	52.987	Cricetulus_griseus_crigri
ENSNBRG00000009067	SCAF8	93	80.293	ENSCSEG00000000043	-	80	78.470	Cynoglossus_semilaevis
ENSNBRG00000009067	SCAF8	89	77.326	ENSCVAG00000000925	SCAF8	77	77.382	Cyprinodon_variegatus
ENSNBRG00000009067	SCAF8	95	50.924	ENSDNOG00000025271	SCAF8	100	51.083	Dasypus_novemcinctus
ENSNBRG00000009067	SCAF8	99	52.019	ENSDORG00000006391	Scaf8	100	52.087	Dipodomys_ordii
ENSNBRG00000009067	SCAF8	100	63.594	ENSEASG00005018879	SCAF8	96	63.711	Equus_asinus_asinus
ENSNBRG00000009067	SCAF8	100	63.318	ENSECAG00000005540	SCAF8	96	63.435	Equus_caballus
ENSNBRG00000009067	SCAF8	91	66.310	ENSELUG00000002779	SCAF8	77	64.885	Esox_lucius
ENSNBRG00000009067	SCAF8	100	53.858	ENSFCAG00000023424	SCAF8	94	66.381	Felis_catus
ENSNBRG00000009067	SCAF8	100	63.108	ENSFALG00000012433	SCAF8	95	63.647	Ficedula_albicollis
ENSNBRG00000009067	SCAF8	100	52.167	ENSFDAG00000010335	SCAF8	100	52.157	Fukomys_damarensis
ENSNBRG00000009067	SCAF8	99	78.947	ENSFHEG00000008284	SCAF8	88	77.500	Fundulus_heteroclitus
ENSNBRG00000009067	SCAF8	79	75.761	ENSGMOG00000018812	SCAF8	83	75.870	Gadus_morhua
ENSNBRG00000009067	SCAF8	99	63.977	ENSGALG00000013635	SCAF8	95	63.743	Gallus_gallus
ENSNBRG00000009067	SCAF8	93	78.571	ENSGAFG00000018033	SCAF8	82	79.125	Gambusia_affinis
ENSNBRG00000009067	SCAF8	94	76.135	ENSGACG00000006909	SCAF8	100	76.492	Gasterosteus_aculeatus
ENSNBRG00000009067	SCAF8	54	59.044	ENSGAGG00000017820	-	82	50.000	Gopherus_agassizii
ENSNBRG00000009067	SCAF8	100	52.746	ENSGGOG00000008645	SCAF8	100	52.733	Gorilla_gorilla
ENSNBRG00000009067	SCAF8	99	97.015	ENSHBUG00000019537	SCAF8	87	97.015	Haplochromis_burtoni
ENSNBRG00000009067	SCAF8	100	52.322	ENSHGLG00000003619	SCAF8	100	52.311	Heterocephalus_glaber_female
ENSNBRG00000009067	SCAF8	99	52.106	ENSHGLG00100004708	SCAF8	100	52.096	Heterocephalus_glaber_male
ENSNBRG00000009067	SCAF8	99	52.255	ENSSTOG00000026043	SCAF8	96	63.121	Ictidomys_tridecemlineatus
ENSNBRG00000009067	SCAF8	94	68.750	ENSJJAG00000020480	Scaf8	89	69.282	Jaculus_jaculus
ENSNBRG00000009067	SCAF8	99	81.734	ENSKMAG00000012767	SCAF8	88	80.304	Kryptolebias_marmoratus
ENSNBRG00000009067	SCAF8	82	88.806	ENSLBEG00000012484	-	72	85.197	Labrus_bergylta
ENSNBRG00000009067	SCAF8	53	48.080	ENSLACG00000001394	SCAF8	99	58.541	Latimeria_chalumnae
ENSNBRG00000009067	SCAF8	100	61.311	ENSLOCG00000016856	SCAF8	100	61.475	Lepisosteus_oculatus
ENSNBRG00000009067	SCAF8	96	68.258	ENSLAFG00000000022	SCAF8	95	64.431	Loxodonta_africana
ENSNBRG00000009067	SCAF8	100	63.084	ENSMFAG00000032738	SCAF8	96	63.084	Macaca_fascicularis
ENSNBRG00000009067	SCAF8	100	63.084	ENSMMUG00000015163	SCAF8	96	63.084	Macaca_mulatta
ENSNBRG00000009067	SCAF8	100	63.084	ENSMNEG00000043466	SCAF8	96	63.084	Macaca_nemestrina
ENSNBRG00000009067	SCAF8	99	62.884	ENSMLEG00000034845	SCAF8	96	62.884	Mandrillus_leucophaeus
ENSNBRG00000009067	SCAF8	95	79.614	ENSMAMG00000009457	SCAF8	87	78.351	Mastacembelus_armatus
ENSNBRG00000009067	SCAF8	99	98.507	ENSMZEG00005005698	SCAF8	87	98.507	Maylandia_zebra
ENSNBRG00000009067	SCAF8	98	66.835	ENSMGAG00000012762	SCAF8	91	66.582	Meleagris_gallopavo
ENSNBRG00000009067	SCAF8	99	52.533	ENSMAUG00000009513	Scaf8	100	53.101	Mesocricetus_auratus
ENSNBRG00000009067	SCAF8	100	52.668	ENSMICG00000028965	SCAF8	100	52.733	Microcebus_murinus
ENSNBRG00000009067	SCAF8	100	52.905	ENSMOCG00000014950	Scaf8	100	53.205	Microtus_ochrogaster
ENSNBRG00000009067	SCAF8	96	78.319	ENSMMOG00000002216	SCAF8	87	76.710	Mola_mola
ENSNBRG00000009067	SCAF8	99	62.840	ENSMODG00000008301	SCAF8	93	64.938	Monodelphis_domestica
ENSNBRG00000009067	SCAF8	100	80.018	ENSMALG00000011584	SCAF8	89	80.018	Monopterus_albus
ENSNBRG00000009067	SCAF8	100	52.701	MGP_CAROLIEiJ_G0021016	Scaf8	100	53.082	Mus_caroli
ENSNBRG00000009067	SCAF8	100	52.778	ENSMUSG00000046201	Scaf8	100	53.313	Mus_musculus
ENSNBRG00000009067	SCAF8	96	69.160	MGP_PahariEiJ_G0023334	Scaf8	90	69.685	Mus_pahari
ENSNBRG00000009067	SCAF8	96	66.922	ENSMPUG00000001974	SCAF8	90	67.050	Mustela_putorius_furo
ENSNBRG00000009067	SCAF8	100	52.359	ENSMLUG00000029190	SCAF8	100	52.432	Myotis_lucifugus
ENSNBRG00000009067	SCAF8	100	52.241	ENSNGAG00000012332	Scaf8	100	52.746	Nannospalax_galili
ENSNBRG00000009067	SCAF8	100	51.775	ENSNLEG00000015509	SCAF8	99	51.625	Nomascus_leucogenys
ENSNBRG00000009067	SCAF8	67	77.320	ENSOPRG00000018413	-	58	77.320	Ochotona_princeps
ENSNBRG00000009067	SCAF8	100	52.436	ENSODEG00000007296	SCAF8	95	64.508	Octodon_degus
ENSNBRG00000009067	SCAF8	100	83.950	ENSONIG00000008119	SCAF8	99	84.202	Oreochromis_niloticus
ENSNBRG00000009067	SCAF8	99	63.239	ENSOCUG00000026063	SCAF8	96	63.239	Oryctolagus_cuniculus
ENSNBRG00000009067	SCAF8	93	79.006	ENSORLG00000017358	SCAF8	80	77.460	Oryzias_latipes
ENSNBRG00000009067	SCAF8	93	78.821	ENSORLG00020002214	SCAF8	80	77.191	Oryzias_latipes_hni
ENSNBRG00000009067	SCAF8	93	78.821	ENSORLG00015015779	SCAF8	80	77.370	Oryzias_latipes_hsok
ENSNBRG00000009067	SCAF8	93	79.409	ENSOMEG00000015471	SCAF8	79	78.206	Oryzias_melastigma
ENSNBRG00000009067	SCAF8	100	51.524	ENSOGAG00000034223	SCAF8	93	61.003	Otolemur_garnettii
ENSNBRG00000009067	SCAF8	99	52.882	ENSOARG00000004159	SCAF8	95	64.303	Ovis_aries
ENSNBRG00000009067	SCAF8	100	52.823	ENSPPAG00000039826	SCAF8	100	52.887	Pan_paniscus
ENSNBRG00000009067	SCAF8	100	64.447	ENSPPRG00000023175	SCAF8	94	64.566	Panthera_pardus
ENSNBRG00000009067	SCAF8	99	64.260	ENSPTIG00000014836	SCAF8	94	64.380	Panthera_tigris_altaica
ENSNBRG00000009067	SCAF8	100	52.746	ENSPTRG00000018727	SCAF8	100	52.810	Pan_troglodytes
ENSNBRG00000009067	SCAF8	100	63.084	ENSPANG00000017489	SCAF8	96	60.397	Papio_anubis
ENSNBRG00000009067	SCAF8	94	67.742	ENSPKIG00000021212	SCAF8	92	66.696	Paramormyrops_kingsleyae
ENSNBRG00000009067	SCAF8	87	60.889	ENSPSIG00000008614	SCAF8	77	60.444	Pelodiscus_sinensis
ENSNBRG00000009067	SCAF8	99	52.537	ENSPEMG00000010531	Scaf8	100	53.033	Peromyscus_maniculatus_bairdii
ENSNBRG00000009067	SCAF8	100	66.220	ENSPCIG00000001141	SCAF8	93	66.098	Phascolarctos_cinereus
ENSNBRG00000009067	SCAF8	99	82.375	ENSPFOG00000004176	SCAF8	93	82.861	Poecilia_formosa
ENSNBRG00000009067	SCAF8	99	80.018	ENSPLAG00000021432	SCAF8	82	80.018	Poecilia_latipinna
ENSNBRG00000009067	SCAF8	99	79.450	ENSPMEG00000007591	SCAF8	86	77.348	Poecilia_mexicana
ENSNBRG00000009067	SCAF8	99	79.633	ENSPREG00000000652	SCAF8	83	78.222	Poecilia_reticulata
ENSNBRG00000009067	SCAF8	100	51.660	ENSPPYG00000017121	SCAF8	100	51.653	Pongo_abelii
ENSNBRG00000009067	SCAF8	79	78.261	ENSPCAG00000013044	SCAF8	74	78.428	Procavia_capensis
ENSNBRG00000009067	SCAF8	100	52.823	ENSPCOG00000002067	SCAF8	99	52.754	Propithecus_coquereli
ENSNBRG00000009067	SCAF8	94	62.007	ENSPVAG00000005582	SCAF8	91	63.934	Pteropus_vampyrus
ENSNBRG00000009067	SCAF8	99	97.015	ENSPNYG00000007277	SCAF8	87	97.015	Pundamilia_nyererei
ENSNBRG00000009067	SCAF8	93	69.746	ENSPNAG00000024740	SCAF8	85	67.972	Pygocentrus_nattereri
ENSNBRG00000009067	SCAF8	100	52.318	ENSRNOG00000016919	Scaf8	100	52.859	Rattus_norvegicus
ENSNBRG00000009067	SCAF8	100	63.084	ENSRBIG00000035769	SCAF8	96	63.084	Rhinopithecus_bieti
ENSNBRG00000009067	SCAF8	100	63.201	ENSRROG00000013580	SCAF8	96	63.201	Rhinopithecus_roxellana
ENSNBRG00000009067	SCAF8	100	52.579	ENSSBOG00000027023	SCAF8	96	63.023	Saimiri_boliviensis_boliviensis
ENSNBRG00000009067	SCAF8	100	64.720	ENSSHAG00000009915	SCAF8	93	64.927	Sarcophilus_harrisii
ENSNBRG00000009067	SCAF8	100	58.895	ENSSFOG00015009481	SCAF8	93	74.133	Scleropages_formosus
ENSNBRG00000009067	SCAF8	93	79.747	ENSSMAG00000008275	SCAF8	86	78.440	Scophthalmus_maximus
ENSNBRG00000009067	SCAF8	96	69.160	ENSSPUG00000015219	SCAF8	87	73.104	Sphenodon_punctatus
ENSNBRG00000009067	SCAF8	100	52.941	ENSSSCG00000004070	SCAF8	100	53.082	Sus_scrofa
ENSNBRG00000009067	SCAF8	95	68.742	ENSTGUG00000011151	SCAF8	96	63.810	Taeniopygia_guttata
ENSNBRG00000009067	SCAF8	99	77.971	ENSTRUG00000009243	SCAF8	85	77.758	Takifugu_rubripes
ENSNBRG00000009067	SCAF8	94	75.410	ENSTNIG00000016885	SCAF8	99	75.205	Tetraodon_nigroviridis
ENSNBRG00000009067	SCAF8	99	62.530	ENSTTRG00000014538	SCAF8	96	62.648	Tursiops_truncatus
ENSNBRG00000009067	SCAF8	100	52.900	ENSUAMG00000024736	SCAF8	99	52.521	Ursus_americanus
ENSNBRG00000009067	SCAF8	98	52.287	ENSUMAG00000013404	SCAF8	100	52.119	Ursus_maritimus
ENSNBRG00000009067	SCAF8	70	58.896	ENSVPAG00000012465	SCAF8	90	87.387	Vicugna_pacos
ENSNBRG00000009067	SCAF8	99	52.455	ENSVVUG00000007532	SCAF8	97	62.455	Vulpes_vulpes
ENSNBRG00000009067	SCAF8	93	67.784	ENSXETG00000013132	scaf8	91	61.765	Xenopus_tropicalis
ENSNBRG00000009067	SCAF8	93	79.266	ENSXMAG00000019192	SCAF8	84	77.847	Xiphophorus_maculatus