EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000009276 (Gene tree)
Gene ID: 102792873
Gene Symbol: rc3h2
Alias: si:ch211-243g18.1
Full Name: roquin-2-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 26882 bases
Position: chrJH422311.1:320402-347283
Accession: 102792873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000011897	zf-CCCH	PF00642.24	6.7e-06	1	1
ENSNBRP00000011919	zf-CCCH	PF00642.24	6.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000012232	-	8277	XM_006795545	ENSNBRP00000011897	1141 (aa)	XP_006795608	-
ENSNBRT00000012254	-	8206	XM_006795546	ENSNBRP00000011919	1141 (aa)	XP_006795609	-

Gene Model

Click here to download ENSNBRG00000009276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000009276's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000009276	rc3h2	92	55.908	ENSG00000056586	RC3H2	95	87.389	Homo_sapiens
ENSNBRG00000009276	rc3h2	100	89.360	ENSAPOG00000002117	rc3h2	100	89.879	Acanthochromis_polyacanthus
ENSNBRG00000009276	rc3h2	92	56.322	ENSAMEG00000006498	RC3H2	91	56.437	Ailuropoda_melanoleuca
ENSNBRG00000009276	rc3h2	100	89.177	ENSAPEG00000007757	rc3h2	100	89.697	Amphiprion_percula
ENSNBRG00000009276	rc3h2	100	86.419	ENSATEG00000019414	rc3h2	100	86.505	Anabas_testudineus
ENSNBRG00000009276	rc3h2	93	57.774	ENSAPLG00000013920	RC3H2	92	57.899	Anas_platyrhynchos
ENSNBRG00000009276	rc3h2	92	56.167	ENSANAG00000030862	RC3H2	99	83.891	Aotus_nancymaae
ENSNBRG00000009276	rc3h2	100	98.267	ENSACLG00000023136	rc3h2	100	98.267	Astatotilapia_calliptera
ENSNBRG00000009276	rc3h2	94	68.848	ENSAMXG00000006778	rc3h2	100	69.212	Astyanax_mexicanus
ENSNBRG00000009276	rc3h2	93	55.744	ENSBTAG00000023867	RC3H2	91	56.915	Bos_taurus
ENSNBRG00000009276	rc3h2	92	56.167	ENSCJAG00000020050	RC3H2	99	83.891	Callithrix_jacchus
ENSNBRG00000009276	rc3h2	92	56.422	ENSCAFG00020015288	RC3H2	95	87.389	Canis_lupus_dingo
ENSNBRG00000009276	rc3h2	92	56.472	ENSCHIG00000019319	RC3H2	91	56.738	Capra_hircus
ENSNBRG00000009276	rc3h2	84	50.986	ENSCAPG00000017086	RC3H2	92	50.986	Cavia_aperea
ENSNBRG00000009276	rc3h2	92	56.826	ENSCPOG00000008511	RC3H2	91	56.676	Cavia_porcellus
ENSNBRG00000009276	rc3h2	92	56.622	ENSCCAG00000001404	RC3H2	99	83.891	Cebus_capucinus
ENSNBRG00000009276	rc3h2	92	55.996	ENSCATG00000036655	RC3H2	95	87.389	Cercocebus_atys
ENSNBRG00000009276	rc3h2	92	56.699	ENSCLAG00000013261	RC3H2	91	56.699	Chinchilla_lanigera
ENSNBRG00000009276	rc3h2	81	53.035	ENSCSAG00000013416	RC3H2	90	53.333	Chlorocebus_sabaeus
ENSNBRG00000009276	rc3h2	93	57.672	ENSCPBG00000009811	RC3H2	91	58.148	Chrysemys_picta_bellii
ENSNBRG00000009276	rc3h2	92	55.996	ENSCANG00000043140	RC3H2	95	87.389	Colobus_angolensis_palliatus
ENSNBRG00000009276	rc3h2	93	56.190	ENSCGRG00001010006	Rc3h2	92	56.404	Cricetulus_griseus_chok1gshd
ENSNBRG00000009276	rc3h2	83	62.736	ENSCGRG00000009255	Rc3h2	77	63.015	Cricetulus_griseus_crigri
ENSNBRG00000009276	rc3h2	100	81.266	ENSCSEG00000017460	rc3h2	100	81.437	Cynoglossus_semilaevis
ENSNBRG00000009276	rc3h2	99	79.844	ENSCVAG00000012202	rc3h2	100	79.496	Cyprinodon_variegatus
ENSNBRG00000009276	rc3h2	100	62.882	ENSDARG00000063050	rc3h2	100	62.966	Danio_rerio
ENSNBRG00000009276	rc3h2	92	56.510	ENSDNOG00000014557	RC3H2	91	56.776	Dasypus_novemcinctus
ENSNBRG00000009276	rc3h2	92	56.625	ENSDORG00000006398	Rc3h2	91	56.625	Dipodomys_ordii
ENSNBRG00000009276	rc3h2	92	55.993	ENSEASG00005020897	RC3H2	99	79.289	Equus_asinus_asinus
ENSNBRG00000009276	rc3h2	92	56.510	ENSECAG00000022176	RC3H2	91	56.776	Equus_caballus
ENSNBRG00000009276	rc3h2	100	70.345	ENSELUG00000006105	rc3h2	100	70.482	Esox_lucius
ENSNBRG00000009276	rc3h2	93	55.872	ENSFCAG00000007375	RC3H2	91	56.776	Felis_catus
ENSNBRG00000009276	rc3h2	92	57.806	ENSFALG00000002011	RC3H2	91	57.932	Ficedula_albicollis
ENSNBRG00000009276	rc3h2	92	56.649	ENSFDAG00000012477	RC3H2	91	56.499	Fukomys_damarensis
ENSNBRG00000009276	rc3h2	99	80.746	ENSFHEG00000012272	rc3h2	100	80.225	Fundulus_heteroclitus
ENSNBRG00000009276	rc3h2	68	68.812	ENSGMOG00000016709	-	99	69.288	Gadus_morhua
ENSNBRG00000009276	rc3h2	93	58.039	ENSGALG00000001253	RC3H2	92	58.164	Gallus_gallus
ENSNBRG00000009276	rc3h2	96	81.357	ENSGAFG00000007679	rc3h2	100	80.814	Gambusia_affinis
ENSNBRG00000009276	rc3h2	74	80.925	ENSGACG00000017369	rc3h2	100	96.606	Gasterosteus_aculeatus
ENSNBRG00000009276	rc3h2	93	57.713	ENSGAGG00000018295	RC3H2	98	58.446	Gopherus_agassizii
ENSNBRG00000009276	rc3h2	93	55.759	ENSGGOG00000017062	RC3H2	95	87.389	Gorilla_gorilla
ENSNBRG00000009276	rc3h2	100	99.562	ENSHBUG00000003976	rc3h2	100	99.562	Haplochromis_burtoni
ENSNBRG00000009276	rc3h2	92	56.738	ENSHGLG00100018015	RC3H2	91	56.738	Heterocephalus_glaber_male
ENSNBRG00000009276	rc3h2	100	74.552	ENSHCOG00000003006	rc3h2	100	74.381	Hippocampus_comes
ENSNBRG00000009276	rc3h2	100	58.890	ENSIPUG00000021433	rc3h2	100	59.530	Ictalurus_punctatus
ENSNBRG00000009276	rc3h2	92	56.738	ENSSTOG00000010655	RC3H2	91	56.738	Ictidomys_tridecemlineatus
ENSNBRG00000009276	rc3h2	92	56.649	ENSJJAG00000022376	Rc3h2	91	56.649	Jaculus_jaculus
ENSNBRG00000009276	rc3h2	100	80.519	ENSKMAG00000010936	rc3h2	100	80.519	Kryptolebias_marmoratus
ENSNBRG00000009276	rc3h2	99	58.779	ENSLOCG00000002894	rc3h2	100	58.439	Lepisosteus_oculatus
ENSNBRG00000009276	rc3h2	92	56.580	ENSLAFG00000003521	RC3H2	91	56.849	Loxodonta_africana
ENSNBRG00000009276	rc3h2	84	87.783	ENSMFAG00000035621	RC3H2	95	87.389	Macaca_fascicularis
ENSNBRG00000009276	rc3h2	93	56.119	ENSMMUG00000021134	RC3H2	95	87.389	Macaca_mulatta
ENSNBRG00000009276	rc3h2	92	55.996	ENSMNEG00000031599	RC3H2	95	85.177	Macaca_nemestrina
ENSNBRG00000009276	rc3h2	93	55.759	ENSMLEG00000033809	RC3H2	95	87.389	Mandrillus_leucophaeus
ENSNBRG00000009276	rc3h2	100	99.562	ENSMZEG00005017019	rc3h2	100	99.562	Maylandia_zebra
ENSNBRG00000009276	rc3h2	93	57.760	ENSMGAG00000007984	RC3H2	92	57.885	Meleagris_gallopavo
ENSNBRG00000009276	rc3h2	73	62.419	ENSMAUG00000003117	Rc3h2	81	62.419	Mesocricetus_auratus
ENSNBRG00000009276	rc3h2	92	56.294	ENSMICG00000003227	RC3H2	95	87.168	Microcebus_murinus
ENSNBRG00000009276	rc3h2	92	56.294	ENSMOCG00000009592	Rc3h2	91	56.294	Microtus_ochrogaster
ENSNBRG00000009276	rc3h2	84	97.577	ENSMMOG00000021305	rc3h2	99	89.567	Mola_mola
ENSNBRG00000009276	rc3h2	93	57.005	ENSMODG00000019725	RC3H2	77	57.043	Monodelphis_domestica
ENSNBRG00000009276	rc3h2	92	57.856	MGP_CAROLIEiJ_G0023516	Rc3h2	99	84.310	Mus_caroli
ENSNBRG00000009276	rc3h2	92	56.244	ENSMUSG00000075376	Rc3h2	99	84.310	Mus_musculus
ENSNBRG00000009276	rc3h2	92	56.726	MGP_PahariEiJ_G0024969	Rc3h2	99	84.310	Mus_pahari
ENSNBRG00000009276	rc3h2	92	56.637	MGP_SPRETEiJ_G0024436	Rc3h2	99	84.310	Mus_spretus
ENSNBRG00000009276	rc3h2	92	56.887	ENSMPUG00000014141	RC3H2	91	57.156	Mustela_putorius_furo
ENSNBRG00000009276	rc3h2	92	56.759	ENSMLUG00000013992	RC3H2	91	56.977	Myotis_lucifugus
ENSNBRG00000009276	rc3h2	92	55.467	ENSNLEG00000017204	RC3H2	95	87.389	Nomascus_leucogenys
ENSNBRG00000009276	rc3h2	53	87.747	ENSMEUG00000001299	-	56	87.747	Notamacropus_eugenii
ENSNBRG00000009276	rc3h2	68	56.650	ENSOPRG00000000135	RC3H2	68	68.750	Ochotona_princeps
ENSNBRG00000009276	rc3h2	100	98.094	ENSONIG00000003945	rc3h2	100	98.094	Oreochromis_niloticus
ENSNBRG00000009276	rc3h2	91	57.003	ENSOANG00000008194	RC3H2	99	57.181	Ornithorhynchus_anatinus
ENSNBRG00000009276	rc3h2	92	56.649	ENSOCUG00000008804	RC3H2	91	56.915	Oryctolagus_cuniculus
ENSNBRG00000009276	rc3h2	100	81.629	ENSORLG00000010018	rc3h2	100	81.629	Oryzias_latipes
ENSNBRG00000009276	rc3h2	100	81.629	ENSORLG00020013257	rc3h2	100	81.629	Oryzias_latipes_hni
ENSNBRG00000009276	rc3h2	100	81.023	ENSORLG00015001525	rc3h2	100	81.629	Oryzias_latipes_hsok
ENSNBRG00000009276	rc3h2	100	82.958	ENSOMEG00000023540	rc3h2	100	82.958	Oryzias_melastigma
ENSNBRG00000009276	rc3h2	92	56.233	ENSOGAG00000010678	RC3H2	91	56.499	Otolemur_garnettii
ENSNBRG00000009276	rc3h2	93	56.392	ENSOARG00000013965	RC3H2	91	56.903	Ovis_aries
ENSNBRG00000009276	rc3h2	92	55.996	ENSPPAG00000036013	RC3H2	95	87.389	Pan_paniscus
ENSNBRG00000009276	rc3h2	92	56.322	ENSPPRG00000008698	RC3H2	94	59.369	Panthera_pardus
ENSNBRG00000009276	rc3h2	92	56.322	ENSPTIG00000014257	RC3H2	94	59.369	Panthera_tigris_altaica
ENSNBRG00000009276	rc3h2	92	55.996	ENSPTRG00000021339	RC3H2	95	87.389	Pan_troglodytes
ENSNBRG00000009276	rc3h2	92	54.586	ENSPANG00000025840	RC3H2	94	83.850	Papio_anubis
ENSNBRG00000009276	rc3h2	99	65.887	ENSPKIG00000021910	rc3h2	96	65.769	Paramormyrops_kingsleyae
ENSNBRG00000009276	rc3h2	93	57.774	ENSPSIG00000005393	RC3H2	91	58.252	Pelodiscus_sinensis
ENSNBRG00000009276	rc3h2	85	94.808	ENSPMGG00000023963	rc3h2	95	94.808	Periophthalmus_magnuspinnatus
ENSNBRG00000009276	rc3h2	92	56.991	ENSPEMG00000023441	Rc3h2	91	56.991	Peromyscus_maniculatus_bairdii
ENSNBRG00000009276	rc3h2	84	88.209	ENSPCIG00000025559	RC3H2	90	88.009	Phascolarctos_cinereus
ENSNBRG00000009276	rc3h2	97	80.321	ENSPFOG00000019699	rc3h2	98	80.053	Poecilia_formosa
ENSNBRG00000009276	rc3h2	95	70.545	ENSPLAG00000005799	rc3h2	100	69.991	Poecilia_latipinna
ENSNBRG00000009276	rc3h2	97	80.677	ENSPMEG00000014187	rc3h2	98	80.410	Poecilia_mexicana
ENSNBRG00000009276	rc3h2	99	80.799	ENSPREG00000008979	rc3h2	100	80.365	Poecilia_reticulata
ENSNBRG00000009276	rc3h2	78	75.099	ENSPCAG00000010154	RC3H2	77	75.099	Procavia_capensis
ENSNBRG00000009276	rc3h2	100	98.440	ENSPNYG00000012063	rc3h2	100	98.440	Pundamilia_nyererei
ENSNBRG00000009276	rc3h2	100	61.068	ENSPNAG00000017502	rc3h2	100	63.221	Pygocentrus_nattereri
ENSNBRG00000009276	rc3h2	92	56.549	ENSRNOG00000009196	Rc3h2	94	56.549	Rattus_norvegicus
ENSNBRG00000009276	rc3h2	92	56.537	ENSRBIG00000032579	RC3H2	95	87.389	Rhinopithecus_bieti
ENSNBRG00000009276	rc3h2	92	56.449	ENSRROG00000043784	RC3H2	95	87.389	Rhinopithecus_roxellana
ENSNBRG00000009276	rc3h2	92	56.167	ENSSBOG00000029100	RC3H2	99	83.857	Saimiri_boliviensis_boliviensis
ENSNBRG00000009276	rc3h2	92	56.667	ENSSHAG00000007498	RC3H2	92	56.364	Sarcophilus_harrisii
ENSNBRG00000009276	rc3h2	100	86.391	ENSSMAG00000020048	rc3h2	100	86.563	Scophthalmus_maximus
ENSNBRG00000009276	rc3h2	100	89.014	ENSSDUG00000016022	rc3h2	100	89.014	Seriola_dumerili
ENSNBRG00000009276	rc3h2	100	88.927	ENSSLDG00000016070	rc3h2	100	88.927	Seriola_lalandi_dorsalis
ENSNBRG00000009276	rc3h2	92	56.549	ENSSARG00000012329	RC3H2	91	56.814	Sorex_araneus
ENSNBRG00000009276	rc3h2	95	56.106	ENSSPUG00000001457	RC3H2	92	57.267	Sphenodon_punctatus
ENSNBRG00000009276	rc3h2	100	89.965	ENSSPAG00000005233	rc3h2	100	90.484	Stegastes_partitus
ENSNBRG00000009276	rc3h2	92	56.637	ENSSSCG00000005575	RC3H2	93	87.168	Sus_scrofa
ENSNBRG00000009276	rc3h2	92	57.627	ENSTGUG00000006889	-	91	57.754	Taeniopygia_guttata
ENSNBRG00000009276	rc3h2	85	74.544	ENSTNIG00000004942	rc3h2	98	74.356	Tetraodon_nigroviridis
ENSNBRG00000009276	rc3h2	71	61.647	ENSTBEG00000009622	RC3H2	79	61.927	Tupaia_belangeri
ENSNBRG00000009276	rc3h2	87	66.667	ENSTTRG00000016954	RC3H2	84	67.054	Tursiops_truncatus
ENSNBRG00000009276	rc3h2	93	55.872	ENSUAMG00000015355	RC3H2	91	56.864	Ursus_americanus
ENSNBRG00000009276	rc3h2	92	56.599	ENSUMAG00000003161	RC3H2	95	87.389	Ursus_maritimus
ENSNBRG00000009276	rc3h2	92	56.018	ENSVPAG00000005994	RC3H2	91	56.134	Vicugna_pacos
ENSNBRG00000009276	rc3h2	92	56.422	ENSVVUG00000009519	RC3H2	94	56.687	Vulpes_vulpes
ENSNBRG00000009276	rc3h2	99	67.690	ENSXCOG00000005002	rc3h2	94	97.732	Xiphophorus_couchianus
ENSNBRG00000009276	rc3h2	99	80.886	ENSXMAG00000001724	rc3h2	100	80.365	Xiphophorus_maculatus