EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000009307 (Gene tree)
Gene ID: 102779675
Gene Symbol: sall1a
Alias: cb896|id:ibd5077|sall1|sb:eu809|spa1a|spalt1a
Full Name: sal-like protein 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 12089 bases
Position: chrJH422273.1:6286582-6298670
Accession: 102779675
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000011938	zf-C2H2	PF00096.26	8.1e-36	1	6
ENSNBRP00000011938	zf-C2H2	PF00096.26	8.1e-36	2	6
ENSNBRP00000011938	zf-C2H2	PF00096.26	8.1e-36	3	6
ENSNBRP00000011938	zf-C2H2	PF00096.26	8.1e-36	4	6
ENSNBRP00000011938	zf-C2H2	PF00096.26	8.1e-36	5	6
ENSNBRP00000011938	zf-C2H2	PF00096.26	8.1e-36	6	6
ENSNBRP00000011934	zf-C2H2	PF00096.26	1.1e-33	1	6
ENSNBRP00000011934	zf-C2H2	PF00096.26	1.1e-33	2	6
ENSNBRP00000011934	zf-C2H2	PF00096.26	1.1e-33	3	6
ENSNBRP00000011934	zf-C2H2	PF00096.26	1.1e-33	4	6
ENSNBRP00000011934	zf-C2H2	PF00096.26	1.1e-33	5	6
ENSNBRP00000011934	zf-C2H2	PF00096.26	1.1e-33	6	6
ENSNBRP00000011938	zf-met	PF12874.7	4.4e-23	1	5
ENSNBRP00000011938	zf-met	PF12874.7	4.4e-23	2	5
ENSNBRP00000011938	zf-met	PF12874.7	4.4e-23	3	5
ENSNBRP00000011938	zf-met	PF12874.7	4.4e-23	4	5
ENSNBRP00000011938	zf-met	PF12874.7	4.4e-23	5	5
ENSNBRP00000011934	zf-met	PF12874.7	9.6e-23	1	5
ENSNBRP00000011934	zf-met	PF12874.7	9.6e-23	2	5
ENSNBRP00000011934	zf-met	PF12874.7	9.6e-23	3	5
ENSNBRP00000011934	zf-met	PF12874.7	9.6e-23	4	5
ENSNBRP00000011934	zf-met	PF12874.7	9.6e-23	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000012275	-	5931	-	ENSNBRP00000011938	1209 (aa)	-	-
ENSNBRT00000012269	-	5818	XM_006779778	ENSNBRP00000011934	1305 (aa)	XP_006779841	UPI0003EBBCCE

Gene Model

Click here to download ENSNBRG00000009307's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000009307's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000009307	sall1a	73	65.385	ENSNBRG00000016034	sall3b	88	65.385
ENSNBRG00000009307	sall1a	51	40.678	ENSNBRG00000014088	-	99	49.057
ENSNBRG00000009307	sall1a	64	50.000	ENSNBRG00000000708	-	92	50.000
ENSNBRG00000009307	sall1a	60	48.980	ENSNBRG00000016577	si:dkey-182i3.9	93	48.980
ENSNBRG00000009307	sall1a	57	50.000	ENSNBRG00000009075	znf236	75	52.174
ENSNBRG00000009307	sall1a	56	43.137	ENSNBRG00000004523	-	87	43.137
ENSNBRG00000009307	sall1a	75	51.366	ENSNBRG00000008974	sall3a	71	50.665
ENSNBRG00000009307	sall1a	59	42.593	ENSNBRG00000006411	-	92	42.593
ENSNBRG00000009307	sall1a	100	60.000	ENSNBRG00000001829	sall4	100	60.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000009307	sall1a	99	67.988	ENSG00000103449	SALL1	100	68.287	Homo_sapiens
ENSNBRG00000009307	sall1a	100	93.956	ENSAPOG00000022764	sall1a	100	93.956	Acanthochromis_polyacanthus
ENSNBRG00000009307	sall1a	99	67.233	ENSAMEG00000006817	SALL1	100	66.940	Ailuropoda_melanoleuca
ENSNBRG00000009307	sall1a	100	96.705	ENSACIG00000004231	sall1a	100	96.705	Amphilophus_citrinellus
ENSNBRG00000009307	sall1a	100	94.262	ENSAOCG00000002800	sall1a	100	94.262	Amphiprion_ocellaris
ENSNBRG00000009307	sall1a	100	93.956	ENSAPEG00000010179	sall1a	100	93.956	Amphiprion_percula
ENSNBRG00000009307	sall1a	99	92.266	ENSATEG00000003006	sall1a	100	91.908	Anabas_testudineus
ENSNBRG00000009307	sall1a	100	69.098	ENSAPLG00000003356	SALL1	100	69.375	Anas_platyrhynchos
ENSNBRG00000009307	sall1a	99	67.990	ENSACAG00000014399	SALL1	97	67.248	Anolis_carolinensis
ENSNBRG00000009307	sall1a	99	67.940	ENSANAG00000027238	SALL1	100	68.512	Aotus_nancymaae
ENSNBRG00000009307	sall1a	100	99.387	ENSACLG00000017148	sall1a	100	99.387	Astatotilapia_calliptera
ENSNBRG00000009307	sall1a	100	80.030	ENSAMXG00000018599	sall1a	100	80.488	Astyanax_mexicanus
ENSNBRG00000009307	sall1a	99	52.058	ENSAMXG00000017702	sall1b	99	50.441	Astyanax_mexicanus
ENSNBRG00000009307	sall1a	100	67.290	ENSBTAG00000008544	SALL1	100	67.742	Bos_taurus
ENSNBRG00000009307	sall1a	99	68.165	ENSCJAG00000001740	SALL1	100	68.736	Callithrix_jacchus
ENSNBRG00000009307	sall1a	99	67.449	ENSCAFG00000009755	SALL1	100	67.790	Canis_familiaris
ENSNBRG00000009307	sall1a	99	67.449	ENSCAFG00020002842	SALL1	100	67.790	Canis_lupus_dingo
ENSNBRG00000009307	sall1a	100	67.340	ENSCHIG00000026074	SALL1	100	67.691	Capra_hircus
ENSNBRG00000009307	sall1a	99	68.563	ENSTSYG00000029464	SALL1	100	68.563	Carlito_syrichta
ENSNBRG00000009307	sall1a	99	67.502	ENSCPOG00000006564	SALL1	100	67.634	Cavia_porcellus
ENSNBRG00000009307	sall1a	99	66.292	ENSCCAG00000001639	SALL1	100	66.717	Cebus_capucinus
ENSNBRG00000009307	sall1a	99	68.063	ENSCATG00000004982	SALL1	100	68.633	Cercocebus_atys
ENSNBRG00000009307	sall1a	99	67.537	ENSCLAG00000006380	SALL1	100	67.636	Chinchilla_lanigera
ENSNBRG00000009307	sall1a	99	67.464	ENSCSAG00000005319	SALL1	100	67.886	Chlorocebus_sabaeus
ENSNBRG00000009307	sall1a	70	66.004	ENSCHOG00000000800	-	69	66.337	Choloepus_hoffmanni
ENSNBRG00000009307	sall1a	100	68.769	ENSCPBG00000015924	SALL1	100	69.121	Chrysemys_picta_bellii
ENSNBRG00000009307	sall1a	99	68.287	ENSCANG00000036664	SALL1	100	68.867	Colobus_angolensis_palliatus
ENSNBRG00000009307	sall1a	99	66.392	ENSCGRG00001023314	-	100	67.165	Cricetulus_griseus_chok1gshd
ENSNBRG00000009307	sall1a	99	66.262	ENSCGRG00000009496	Sall1	100	66.820	Cricetulus_griseus_crigri
ENSNBRG00000009307	sall1a	99	89.951	ENSCSEG00000009349	sall1a	99	89.924	Cynoglossus_semilaevis
ENSNBRG00000009307	sall1a	90	90.284	ENSCVAG00000020513	sall1a	99	90.284	Cyprinodon_variegatus
ENSNBRG00000009307	sall1a	99	48.123	ENSDARG00000075891	sall1b	99	47.353	Danio_rerio
ENSNBRG00000009307	sall1a	100	78.995	ENSDARG00000074319	sall1a	100	78.615	Danio_rerio
ENSNBRG00000009307	sall1a	99	68.391	ENSDNOG00000016413	SALL1	100	68.141	Dasypus_novemcinctus
ENSNBRG00000009307	sall1a	99	67.583	ENSETEG00000015150	SALL1	100	67.405	Echinops_telfairi
ENSNBRG00000009307	sall1a	67	41.993	ENSEBUG00000008798	SALL1	67	40.699	Eptatretus_burgeri
ENSNBRG00000009307	sall1a	75	52.856	ENSEBUG00000011732	SALL1	97	63.462	Eptatretus_burgeri
ENSNBRG00000009307	sall1a	99	67.889	ENSEASG00005014602	SALL1	100	68.117	Equus_asinus_asinus
ENSNBRG00000009307	sall1a	90	65.952	ENSECAG00000011334	SALL1	99	66.088	Equus_caballus
ENSNBRG00000009307	sall1a	99	67.421	ENSEEUG00000002014	SALL1	100	67.737	Erinaceus_europaeus
ENSNBRG00000009307	sall1a	100	77.498	ENSELUG00000006159	sall1a	100	77.426	Esox_lucius
ENSNBRG00000009307	sall1a	100	54.006	ENSELUG00000017774	-	100	54.396	Esox_lucius
ENSNBRG00000009307	sall1a	99	66.238	ENSFCAG00000024654	SALL1	100	66.692	Felis_catus
ENSNBRG00000009307	sall1a	100	69.526	ENSFALG00000000074	SALL1	100	69.428	Ficedula_albicollis
ENSNBRG00000009307	sall1a	75	63.265	ENSFHEG00000008424	-	100	63.265	Fundulus_heteroclitus
ENSNBRG00000009307	sall1a	100	91.431	ENSFHEG00000012579	sall1a	100	91.431	Fundulus_heteroclitus
ENSNBRG00000009307	sall1a	97	40.724	ENSGMOG00000013383	-	73	45.325	Gadus_morhua
ENSNBRG00000009307	sall1a	100	84.070	ENSGMOG00000006103	sall1a	100	84.070	Gadus_morhua
ENSNBRG00000009307	sall1a	100	69.375	ENSGALG00000039238	SALL1	100	69.277	Gallus_gallus
ENSNBRG00000009307	sall1a	100	91.749	ENSGAFG00000009964	sall1a	100	91.749	Gambusia_affinis
ENSNBRG00000009307	sall1a	99	90.352	ENSGACG00000016702	sall1a	99	90.352	Gasterosteus_aculeatus
ENSNBRG00000009307	sall1a	100	68.544	ENSGAGG00000013979	SALL1	100	68.896	Gopherus_agassizii
ENSNBRG00000009307	sall1a	99	67.913	ENSGGOG00000000663	SALL1	100	68.212	Gorilla_gorilla
ENSNBRG00000009307	sall1a	100	99.310	ENSHBUG00000022005	sall1a	100	99.310	Haplochromis_burtoni
ENSNBRG00000009307	sall1a	99	67.886	ENSHGLG00000004288	-	100	68.009	Heterocephalus_glaber_female
ENSNBRG00000009307	sall1a	99	67.886	ENSHGLG00100017496	SALL1	100	68.009	Heterocephalus_glaber_male
ENSNBRG00000009307	sall1a	100	84.545	ENSHCOG00000000974	sall1a	100	84.242	Hippocampus_comes
ENSNBRG00000009307	sall1a	100	79.441	ENSIPUG00000016265	SALL1	100	78.719	Ictalurus_punctatus
ENSNBRG00000009307	sall1a	99	50.574	ENSIPUG00000022928	sall1b	99	49.810	Ictalurus_punctatus
ENSNBRG00000009307	sall1a	99	67.932	ENSSTOG00000020885	SALL1	100	68.229	Ictidomys_tridecemlineatus
ENSNBRG00000009307	sall1a	100	92.733	ENSKMAG00000016681	sall1a	100	92.655	Kryptolebias_marmoratus
ENSNBRG00000009307	sall1a	99	90.413	ENSLBEG00000012207	sall1a	95	90.510	Labrus_bergylta
ENSNBRG00000009307	sall1a	99	39.335	ENSLACG00000014018	-	93	39.558	Latimeria_chalumnae
ENSNBRG00000009307	sall1a	100	68.651	ENSLACG00000003556	SALL1	100	69.254	Latimeria_chalumnae
ENSNBRG00000009307	sall1a	100	77.231	ENSLOCG00000007283	sall1b	100	77.156	Lepisosteus_oculatus
ENSNBRG00000009307	sall1a	99	67.771	ENSLAFG00000015251	SALL1	100	67.939	Loxodonta_africana
ENSNBRG00000009307	sall1a	99	68.189	ENSMFAG00000003298	SALL1	100	68.661	Macaca_fascicularis
ENSNBRG00000009307	sall1a	99	67.877	ENSMMUG00000017200	SALL1	100	68.387	Macaca_mulatta
ENSNBRG00000009307	sall1a	99	68.145	ENSMNEG00000034770	SALL1	100	68.226	Macaca_nemestrina
ENSNBRG00000009307	sall1a	99	68.437	ENSMLEG00000036406	SALL1	100	68.736	Mandrillus_leucophaeus
ENSNBRG00000009307	sall1a	99	93.114	ENSMAMG00000004164	sall1a	99	93.114	Mastacembelus_armatus
ENSNBRG00000009307	sall1a	100	99.310	ENSMZEG00005006479	sall1a	100	99.310	Maylandia_zebra
ENSNBRG00000009307	sall1a	100	68.994	ENSMGAG00000004704	SALL1	100	68.995	Meleagris_gallopavo
ENSNBRG00000009307	sall1a	99	66.366	ENSMAUG00000019093	Sall1	100	66.617	Mesocricetus_auratus
ENSNBRG00000009307	sall1a	100	67.742	ENSMICG00000036486	SALL1	100	67.868	Microcebus_murinus
ENSNBRG00000009307	sall1a	99	91.334	ENSMMOG00000016400	sall1a	99	91.334	Mola_mola
ENSNBRG00000009307	sall1a	99	68.876	ENSMODG00000013114	SALL1	99	69.046	Monodelphis_domestica
ENSNBRG00000009307	sall1a	99	92.573	ENSMALG00000013400	sall1a	99	92.573	Monopterus_albus
ENSNBRG00000009307	sall1a	99	66.368	MGP_CAROLIEiJ_G0031362	Sall1	100	66.716	Mus_caroli
ENSNBRG00000009307	sall1a	99	66.170	ENSMUSG00000031665	Sall1	100	66.692	Mus_musculus
ENSNBRG00000009307	sall1a	99	66.219	MGP_PahariEiJ_G0022961	Sall1	100	66.667	Mus_pahari
ENSNBRG00000009307	sall1a	99	66.170	MGP_SPRETEiJ_G0032480	Sall1	100	66.692	Mus_spretus
ENSNBRG00000009307	sall1a	100	66.990	ENSMPUG00000003265	SALL1	96	67.072	Mustela_putorius_furo
ENSNBRG00000009307	sall1a	100	65.378	ENSMLUG00000015541	SALL1	99	66.233	Myotis_lucifugus
ENSNBRG00000009307	sall1a	94	80.447	ENSNLEG00000001008	SALL1	99	80.000	Nomascus_leucogenys
ENSNBRG00000009307	sall1a	99	68.947	ENSMEUG00000012206	SALL1	99	68.901	Notamacropus_eugenii
ENSNBRG00000009307	sall1a	87	72.059	ENSOPRG00000005645	SALL1	71	71.829	Ochotona_princeps
ENSNBRG00000009307	sall1a	99	67.643	ENSODEG00000003685	SALL1	100	67.766	Octodon_degus
ENSNBRG00000009307	sall1a	100	98.851	ENSONIG00000002831	sall1a	100	98.851	Oreochromis_niloticus
ENSNBRG00000009307	sall1a	100	60.146	ENSOANG00000013399	SALL1	96	76.639	Ornithorhynchus_anatinus
ENSNBRG00000009307	sall1a	100	90.972	ENSORLG00000013827	sall1a	100	91.470	Oryzias_latipes
ENSNBRG00000009307	sall1a	100	90.972	ENSORLG00020020570	sall1a	100	90.972	Oryzias_latipes_hni
ENSNBRG00000009307	sall1a	100	90.834	ENSORLG00015018830	sall1a	100	91.385	Oryzias_latipes_hsok
ENSNBRG00000009307	sall1a	100	90.834	ENSOMEG00000016043	sall1a	100	90.834	Oryzias_melastigma
ENSNBRG00000009307	sall1a	99	67.937	ENSOGAG00000027316	SALL1	100	68.114	Otolemur_garnettii
ENSNBRG00000009307	sall1a	100	63.446	ENSOARG00000017583	SALL1	100	63.814	Ovis_aries
ENSNBRG00000009307	sall1a	99	50.113	ENSPPAG00000035136	-	99	49.590	Pan_paniscus
ENSNBRG00000009307	sall1a	99	67.823	ENSPPAG00000035657	SALL1	100	68.421	Pan_paniscus
ENSNBRG00000009307	sall1a	100	66.095	ENSPPRG00000023283	SALL1	100	66.617	Panthera_pardus
ENSNBRG00000009307	sall1a	89	69.832	ENSPTIG00000013539	-	94	69.174	Panthera_tigris_altaica
ENSNBRG00000009307	sall1a	99	67.940	ENSPTRG00000008108	SALL1	100	68.362	Pan_troglodytes
ENSNBRG00000009307	sall1a	99	50.382	ENSPTRG00000045256	-	99	50.076	Pan_troglodytes
ENSNBRG00000009307	sall1a	99	68.362	ENSPANG00000024176	SALL1	100	68.661	Papio_anubis
ENSNBRG00000009307	sall1a	100	71.791	ENSPKIG00000022251	sall1a	100	71.797	Paramormyrops_kingsleyae
ENSNBRG00000009307	sall1a	100	70.053	ENSPKIG00000005383	-	100	70.584	Paramormyrops_kingsleyae
ENSNBRG00000009307	sall1a	100	69.300	ENSPSIG00000008582	SALL1	100	69.277	Pelodiscus_sinensis
ENSNBRG00000009307	sall1a	99	86.221	ENSPMGG00000021788	sall1a	99	84.819	Periophthalmus_magnuspinnatus
ENSNBRG00000009307	sall1a	99	49.368	ENSPMAG00000008148	sall1b	73	54.555	Petromyzon_marinus
ENSNBRG00000009307	sall1a	99	69.069	ENSPCIG00000017840	SALL1	99	68.901	Phascolarctos_cinereus
ENSNBRG00000009307	sall1a	100	91.674	ENSPFOG00000015799	sall1a	96	91.764	Poecilia_formosa
ENSNBRG00000009307	sall1a	100	92.055	ENSPLAG00000022539	sall1a	100	92.055	Poecilia_latipinna
ENSNBRG00000009307	sall1a	100	92.208	ENSPMEG00000020894	sall1a	100	92.208	Poecilia_mexicana
ENSNBRG00000009307	sall1a	100	91.673	ENSPREG00000006802	sall1a	100	91.673	Poecilia_reticulata
ENSNBRG00000009307	sall1a	90	66.835	ENSPPYG00000007345	SALL1	96	67.450	Pongo_abelii
ENSNBRG00000009307	sall1a	85	70.370	ENSPCAG00000008162	SALL1	93	70.370	Procavia_capensis
ENSNBRG00000009307	sall1a	99	67.568	ENSPCOG00000028192	SALL1	100	68.066	Propithecus_coquereli
ENSNBRG00000009307	sall1a	72	69.364	ENSPVAG00000015374	SALL1	100	69.560	Pteropus_vampyrus
ENSNBRG00000009307	sall1a	100	99.464	ENSPNYG00000010865	sall1a	100	99.464	Pundamilia_nyererei
ENSNBRG00000009307	sall1a	100	78.522	ENSPNAG00000023644	sall1a	100	78.979	Pygocentrus_nattereri
ENSNBRG00000009307	sall1a	99	53.113	ENSPNAG00000007442	sall1b	99	53.153	Pygocentrus_nattereri
ENSNBRG00000009307	sall1a	100	66.542	ENSRNOG00000013907	Sall1	100	66.592	Rattus_norvegicus
ENSNBRG00000009307	sall1a	99	67.823	ENSRBIG00000015707	SALL1	100	68.578	Rhinopithecus_bieti
ENSNBRG00000009307	sall1a	99	67.823	ENSRROG00000035777	SALL1	100	68.578	Rhinopithecus_roxellana
ENSNBRG00000009307	sall1a	99	68.114	ENSSBOG00000032186	SALL1	100	68.736	Saimiri_boliviensis_boliviensis
ENSNBRG00000009307	sall1a	99	68.775	ENSSHAG00000009477	SALL1	99	68.548	Sarcophilus_harrisii
ENSNBRG00000009307	sall1a	100	73.036	ENSSFOG00015020020	sall1a	100	72.961	Scleropages_formosus
ENSNBRG00000009307	sall1a	100	71.883	ENSSFOG00015001590	sall1a	99	71.957	Scleropages_formosus
ENSNBRG00000009307	sall1a	99	92.573	ENSSMAG00000009160	sall1a	99	92.573	Scophthalmus_maximus
ENSNBRG00000009307	sall1a	82	57.143	ENSSDUG00000000748	sall1b	99	57.143	Seriola_dumerili
ENSNBRG00000009307	sall1a	99	94.181	ENSSDUG00000006507	sall1a	99	94.181	Seriola_dumerili
ENSNBRG00000009307	sall1a	99	94.104	ENSSLDG00000017721	sall1a	99	94.104	Seriola_lalandi_dorsalis
ENSNBRG00000009307	sall1a	99	66.827	ENSSARG00000000661	SALL1	99	67.431	Sorex_araneus
ENSNBRG00000009307	sall1a	100	68.647	ENSSPUG00000000156	SALL1	100	69.323	Sphenodon_punctatus
ENSNBRG00000009307	sall1a	100	94.113	ENSSPAG00000021615	sall1a	100	94.113	Stegastes_partitus
ENSNBRG00000009307	sall1a	99	67.016	ENSSSCG00000002836	SALL1	100	67.091	Sus_scrofa
ENSNBRG00000009307	sall1a	100	69.150	ENSTGUG00000007514	SALL1	100	69.051	Taeniopygia_guttata
ENSNBRG00000009307	sall1a	91	87.846	ENSTRUG00000008950	sall1a	100	87.846	Takifugu_rubripes
ENSNBRG00000009307	sall1a	92	86.394	ENSTNIG00000004257	sall1a	100	86.394	Tetraodon_nigroviridis
ENSNBRG00000009307	sall1a	67	77.241	ENSTBEG00000002119	-	53	76.712	Tupaia_belangeri
ENSNBRG00000009307	sall1a	90	65.938	ENSUAMG00000023379	-	92	65.750	Ursus_americanus
ENSNBRG00000009307	sall1a	90	65.968	ENSVVUG00000019383	-	99	66.387	Vulpes_vulpes
ENSNBRG00000009307	sall1a	100	67.070	ENSXETG00000018417	sall1	100	65.593	Xenopus_tropicalis
ENSNBRG00000009307	sall1a	86	61.538	ENSXETG00000017176	sall2	84	61.538	Xenopus_tropicalis
ENSNBRG00000009307	sall1a	100	91.902	ENSXMAG00000016273	sall1a	100	91.902	Xiphophorus_maculatus