EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000009423 (Gene tree)
Gene ID: 102780718
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain-helicase-DNA-binding protein 9-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 76542 bases
Position: chrJH422273.1:6702728-6779269
Accession: 102780718
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000012254	ResIII	PF04851.15	3.3e-06	1	1
ENSNBRP00000012307	ResIII	PF04851.15	4.3e-06	1	1
ENSNBRP00000012233	ResIII	PF04851.15	1.6e-05	1	1
ENSNBRP00000012198	ResIII	PF04851.15	1.6e-05	1	1
ENSNBRP00000012254	BRK	PF07533.16	5.6e-32	1	2
ENSNBRP00000012254	BRK	PF07533.16	5.6e-32	2	2
ENSNBRP00000012307	BRK	PF07533.16	8.1e-32	1	2
ENSNBRP00000012307	BRK	PF07533.16	8.1e-32	2	2
ENSNBRP00000012198	BRK	PF07533.16	8.7e-32	1	2
ENSNBRP00000012198	BRK	PF07533.16	8.7e-32	2	2
ENSNBRP00000012233	BRK	PF07533.16	8.8e-32	1	2
ENSNBRP00000012233	BRK	PF07533.16	8.8e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000012608	-	10428	XM_006779783	ENSNBRP00000012254	2486 (aa)	XP_006779846	-
ENSNBRT00000012585	-	12195	-	ENSNBRP00000012233	2940 (aa)	-	-
ENSNBRT00000012661	-	8622	-	ENSNBRP00000012307	2873 (aa)	-	-
ENSNBRT00000012549	-	12342	XM_006779781	ENSNBRP00000012198	2989 (aa)	XP_006779844	UPI0003EBC419

Gene Model

Click here to download ENSNBRG00000009423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000009423's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000009423	chd9	75	63.662	ENSNBRG00000013839	chd6	50	64.086
ENSNBRG00000009423	chd9	87	54.481	ENSNBRG00000001280	chd7	58	69.461
ENSNBRG00000009423	chd9	69	59.542	ENSNBRG00000017428	chd8	66	61.779

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000009423	chd9	98	68.591	ENSG00000177200	CHD9	91	77.778	Homo_sapiens
ENSNBRG00000009423	chd9	99	92.959	ENSAPOG00000023034	chd9	99	91.905	Acanthochromis_polyacanthus
ENSNBRG00000009423	chd9	67	75.759	ENSAMEG00000016232	CHD9	84	71.207	Ailuropoda_melanoleuca
ENSNBRG00000009423	chd9	99	88.632	ENSACIG00000004097	chd9	98	88.812	Amphilophus_citrinellus
ENSNBRG00000009423	chd9	99	92.710	ENSAOCG00000005487	chd9	99	92.066	Amphiprion_ocellaris
ENSNBRG00000009423	chd9	99	92.670	ENSAPEG00000009859	chd9	99	92.026	Amphiprion_percula
ENSNBRG00000009423	chd9	99	90.582	ENSATEG00000002748	chd9	99	85.576	Anabas_testudineus
ENSNBRG00000009423	chd9	98	69.095	ENSAPLG00000002826	CHD9	79	71.026	Anas_platyrhynchos
ENSNBRG00000009423	chd9	68	75.468	ENSACAG00000016150	CHD9	84	71.025	Anolis_carolinensis
ENSNBRG00000009423	chd9	99	60.983	ENSANAG00000015630	CHD9	92	70.213	Aotus_nancymaae
ENSNBRG00000009423	chd9	99	98.330	ENSACLG00000016899	chd9	99	99.419	Astatotilapia_calliptera
ENSNBRG00000009423	chd9	99	77.098	ENSAMXG00000005652	chd9	99	76.806	Astyanax_mexicanus
ENSNBRG00000009423	chd9	67	75.283	ENSBTAG00000002287	CHD9	84	70.682	Bos_taurus
ENSNBRG00000009423	chd9	97	69.353	ENSCJAG00000001573	CHD9	92	70.567	Callithrix_jacchus
ENSNBRG00000009423	chd9	67	75.581	ENSCAFG00000009699	CHD9	84	71.302	Canis_familiaris
ENSNBRG00000009423	chd9	67	75.581	ENSCAFG00020002879	CHD9	91	71.277	Canis_lupus_dingo
ENSNBRG00000009423	chd9	99	59.019	ENSCHIG00000021000	CHD9	82	73.245	Capra_hircus
ENSNBRG00000009423	chd9	67	75.298	ENSTSYG00000007693	CHD9	92	70.139	Carlito_syrichta
ENSNBRG00000009423	chd9	75	60.676	ENSCAPG00000011604	CHD9	56	62.571	Cavia_aperea
ENSNBRG00000009423	chd9	67	71.002	ENSCPOG00000036544	CHD9	93	67.757	Cavia_porcellus
ENSNBRG00000009423	chd9	99	60.351	ENSCCAG00000036178	CHD9	92	71.174	Cebus_capucinus
ENSNBRG00000009423	chd9	67	75.656	ENSCATG00000036753	CHD9	91	71.277	Cercocebus_atys
ENSNBRG00000009423	chd9	67	75.418	ENSCLAG00000007137	CHD9	99	77.373	Chinchilla_lanigera
ENSNBRG00000009423	chd9	67	75.597	ENSCSAG00000005311	CHD9	84	70.615	Chlorocebus_sabaeus
ENSNBRG00000009423	chd9	68	91.406	ENSCHOG00000003935	CHD9	55	91.361	Choloepus_hoffmanni
ENSNBRG00000009423	chd9	94	83.134	ENSCPBG00000012459	CHD9	86	78.514	Chrysemys_picta_bellii
ENSNBRG00000009423	chd9	99	60.948	ENSCANG00000030349	CHD9	92	71.277	Colobus_angolensis_palliatus
ENSNBRG00000009423	chd9	97	68.200	ENSCGRG00001016150	Chd9	84	70.113	Cricetulus_griseus_chok1gshd
ENSNBRG00000009423	chd9	97	68.200	ENSCGRG00000012850	Chd9	99	77.544	Cricetulus_griseus_crigri
ENSNBRG00000009423	chd9	99	85.423	ENSCSEG00000009209	chd9	99	83.641	Cynoglossus_semilaevis
ENSNBRG00000009423	chd9	94	88.682	ENSCVAG00000016195	chd9	99	80.552	Cyprinodon_variegatus
ENSNBRG00000009423	chd9	99	75.697	ENSDARG00000074498	chd9	99	75.419	Danio_rerio
ENSNBRG00000009423	chd9	94	69.578	ENSDNOG00000006045	CHD9	94	71.567	Dasypus_novemcinctus
ENSNBRG00000009423	chd9	50	78.103	ENSDORG00000008523	-	96	71.718	Dipodomys_ordii
ENSNBRG00000009423	chd9	65	91.270	ENSETEG00000009565	CHD9	76	91.270	Echinops_telfairi
ENSNBRG00000009423	chd9	94	72.841	ENSEASG00005014832	CHD9	96	78.653	Equus_asinus_asinus
ENSNBRG00000009423	chd9	67	75.462	ENSECAG00000011505	CHD9	91	71.139	Equus_caballus
ENSNBRG00000009423	chd9	79	86.784	ENSEEUG00000014515	CHD9	72	83.978	Erinaceus_europaeus
ENSNBRG00000009423	chd9	97	79.790	ENSELUG00000006031	chd9	99	79.073	Esox_lucius
ENSNBRG00000009423	chd9	97	68.927	ENSFCAG00000022534	CHD9	91	71.631	Felis_catus
ENSNBRG00000009423	chd9	99	68.933	ENSFALG00000013276	CHD9	97	70.413	Ficedula_albicollis
ENSNBRG00000009423	chd9	67	75.552	ENSFDAG00000021037	CHD9	85	70.330	Fukomys_damarensis
ENSNBRG00000009423	chd9	99	88.176	ENSFHEG00000006068	chd9	99	87.893	Fundulus_heteroclitus
ENSNBRG00000009423	chd9	80	86.576	ENSGMOG00000006040	chd9	83	86.576	Gadus_morhua
ENSNBRG00000009423	chd9	93	71.302	ENSGALG00000039178	CHD9	85	72.010	Gallus_gallus
ENSNBRG00000009423	chd9	99	89.127	ENSGAFG00000010014	chd9	99	89.369	Gambusia_affinis
ENSNBRG00000009423	chd9	96	85.271	ENSGACG00000016694	chd9	97	88.217	Gasterosteus_aculeatus
ENSNBRG00000009423	chd9	99	60.914	ENSGGOG00000014816	CHD9	92	70.922	Gorilla_gorilla
ENSNBRG00000009423	chd9	100	97.284	ENSHBUG00000023322	chd9	100	97.284	Haplochromis_burtoni
ENSNBRG00000009423	chd9	97	68.922	ENSHGLG00000014938	CHD9	96	80.737	Heterocephalus_glaber_female
ENSNBRG00000009423	chd9	96	82.945	ENSHCOG00000000937	chd9	97	83.374	Hippocampus_comes
ENSNBRG00000009423	chd9	99	77.216	ENSIPUG00000016448	chd9	97	82.686	Ictalurus_punctatus
ENSNBRG00000009423	chd9	97	69.507	ENSSTOG00000022273	CHD9	99	77.298	Ictidomys_tridecemlineatus
ENSNBRG00000009423	chd9	50	77.577	ENSJJAG00000015741	-	96	71.610	Jaculus_jaculus
ENSNBRG00000009423	chd9	96	89.252	ENSKMAG00000016784	chd9	99	87.957	Kryptolebias_marmoratus
ENSNBRG00000009423	chd9	99	88.394	ENSLBEG00000012077	chd9	99	88.389	Labrus_bergylta
ENSNBRG00000009423	chd9	97	65.141	ENSLACG00000005557	CHD9	79	66.610	Latimeria_chalumnae
ENSNBRG00000009423	chd9	99	75.859	ENSLOCG00000007225	chd9	97	77.316	Lepisosteus_oculatus
ENSNBRG00000009423	chd9	67	75.000	ENSLAFG00000015374	CHD9	84	70.054	Loxodonta_africana
ENSNBRG00000009423	chd9	93	70.105	ENSMFAG00000041354	CHD9	93	71.172	Macaca_fascicularis
ENSNBRG00000009423	chd9	67	75.656	ENSMMUG00000016310	CHD9	92	71.277	Macaca_mulatta
ENSNBRG00000009423	chd9	99	60.625	ENSMNEG00000031494	CHD9	85	72.390	Macaca_nemestrina
ENSNBRG00000009423	chd9	67	75.656	ENSMLEG00000043219	CHD9	92	71.277	Mandrillus_leucophaeus
ENSNBRG00000009423	chd9	99	90.222	ENSMAMG00000003909	chd9	99	85.524	Mastacembelus_armatus
ENSNBRG00000009423	chd9	100	98.922	ENSMZEG00005006581	chd9	100	98.922	Maylandia_zebra
ENSNBRG00000009423	chd9	98	64.638	ENSMGAG00000004642	CHD9	59	72.886	Meleagris_gallopavo
ENSNBRG00000009423	chd9	67	75.537	ENSMICG00000016679	CHD9	92	70.486	Microcebus_murinus
ENSNBRG00000009423	chd9	66	91.469	ENSMMOG00000016406	chd9	99	81.787	Mola_mola
ENSNBRG00000009423	chd9	85	76.102	ENSMODG00000013142	-	96	77.793	Monodelphis_domestica
ENSNBRG00000009423	chd9	98	87.343	ENSMALG00000013306	chd9	99	83.356	Monopterus_albus
ENSNBRG00000009423	chd9	67	74.362	MGP_CAROLIEiJ_G0031364	Chd9	84	68.974	Mus_caroli
ENSNBRG00000009423	chd9	67	74.347	ENSMUSG00000056608	Chd9	99	76.523	Mus_musculus
ENSNBRG00000009423	chd9	67	74.539	MGP_PahariEiJ_G0022964	Chd9	84	69.309	Mus_pahari
ENSNBRG00000009423	chd9	67	74.050	MGP_SPRETEiJ_G0032483	Chd9	84	68.877	Mus_spretus
ENSNBRG00000009423	chd9	67	75.759	ENSMPUG00000003285	CHD9	85	70.141	Mustela_putorius_furo
ENSNBRG00000009423	chd9	67	75.060	ENSMLUG00000004456	CHD9	84	70.176	Myotis_lucifugus
ENSNBRG00000009423	chd9	85	71.435	ENSNLEG00000001026	CHD9	85	72.507	Nomascus_leucogenys
ENSNBRG00000009423	chd9	73	94.737	ENSMEUG00000008222	-	77	90.446	Notamacropus_eugenii
ENSNBRG00000009423	chd9	55	94.737	ENSOPRG00000011168	CHD9	72	86.479	Ochotona_princeps
ENSNBRG00000009423	chd9	67	75.209	ENSODEG00000004466	CHD9	84	70.142	Octodon_degus
ENSNBRG00000009423	chd9	99	95.631	ENSONIG00000002816	chd9	99	98.558	Oreochromis_niloticus
ENSNBRG00000009423	chd9	67	76.185	ENSOANG00000013401	CHD9	84	71.483	Ornithorhynchus_anatinus
ENSNBRG00000009423	chd9	68	74.620	ENSOCUG00000001016	CHD9	96	69.190	Oryctolagus_cuniculus
ENSNBRG00000009423	chd9	96	87.830	ENSORLG00000013810	chd9	97	84.890	Oryzias_latipes
ENSNBRG00000009423	chd9	97	82.391	ENSORLG00020020665	chd9	98	78.510	Oryzias_latipes_hni
ENSNBRG00000009423	chd9	98	87.252	ENSORLG00015019126	chd9	97	87.055	Oryzias_latipes_hsok
ENSNBRG00000009423	chd9	55	90.518	ENSOMEG00000015978	chd9	99	81.632	Oryzias_melastigma
ENSNBRG00000009423	chd9	97	68.742	ENSOGAG00000002110	CHD9	84	69.812	Otolemur_garnettii
ENSNBRG00000009423	chd9	99	59.744	ENSOARG00000017664	CHD9	84	70.067	Ovis_aries
ENSNBRG00000009423	chd9	97	68.123	ENSPPAG00000039388	-	96	69.870	Pan_paniscus
ENSNBRG00000009423	chd9	97	68.967	ENSPPRG00000004801	CHD9	91	71.277	Panthera_pardus
ENSNBRG00000009423	chd9	97	67.877	ENSPTIG00000021854	CHD9	84	69.811	Panthera_tigris_altaica
ENSNBRG00000009423	chd9	99	60.948	ENSPTRG00000008113	CHD9	92	70.922	Pan_troglodytes
ENSNBRG00000009423	chd9	98	68.287	ENSPANG00000019307	CHD9	96	70.546	Papio_anubis
ENSNBRG00000009423	chd9	98	70.774	ENSPKIG00000025401	-	97	63.806	Paramormyrops_kingsleyae
ENSNBRG00000009423	chd9	95	78.294	ENSPKIG00000021876	chd9	96	79.050	Paramormyrops_kingsleyae
ENSNBRG00000009423	chd9	56	77.403	ENSPSIG00000008099	CHD9	78	78.882	Pelodiscus_sinensis
ENSNBRG00000009423	chd9	85	70.588	ENSPCIG00000017215	CHD9	96	76.913	Phascolarctos_cinereus
ENSNBRG00000009423	chd9	99	89.128	ENSPFOG00000015839	chd9	99	84.680	Poecilia_formosa
ENSNBRG00000009423	chd9	99	89.168	ENSPLAG00000011118	chd9	99	88.514	Poecilia_latipinna
ENSNBRG00000009423	chd9	99	85.490	ENSPMEG00000015106	chd9	99	81.215	Poecilia_mexicana
ENSNBRG00000009423	chd9	97	90.391	ENSPREG00000006473	chd9	99	89.244	Poecilia_reticulata
ENSNBRG00000009423	chd9	99	60.908	ENSPPYG00000007348	CHD9	85	70.463	Pongo_abelii
ENSNBRG00000009423	chd9	73	80.255	ENSPCAG00000007564	CHD9	74	82.176	Procavia_capensis
ENSNBRG00000009423	chd9	67	73.150	ENSPCOG00000028433	CHD9	91	70.567	Propithecus_coquereli
ENSNBRG00000009423	chd9	79	72.798	ENSPVAG00000015617	CHD9	81	74.385	Pteropus_vampyrus
ENSNBRG00000009423	chd9	100	99.002	ENSPNYG00000010947	chd9	100	99.002	Pundamilia_nyererei
ENSNBRG00000009423	chd9	99	77.201	ENSPNAG00000024141	chd9	99	77.149	Pygocentrus_nattereri
ENSNBRG00000009423	chd9	67	71.844	ENSRNOG00000049302	Chd9	75	78.518	Rattus_norvegicus
ENSNBRG00000009423	chd9	97	68.861	ENSRBIG00000035553	CHD9	96	70.588	Rhinopithecus_bieti
ENSNBRG00000009423	chd9	96	69.665	ENSRROG00000033278	CHD9	97	70.554	Rhinopithecus_roxellana
ENSNBRG00000009423	chd9	97	68.866	ENSSBOG00000030240	CHD9	92	70.567	Saimiri_boliviensis_boliviensis
ENSNBRG00000009423	chd9	97	68.999	ENSSHAG00000002719	CHD9	79	70.853	Sarcophilus_harrisii
ENSNBRG00000009423	chd9	96	78.512	ENSSFOG00015020209	chd9	99	77.188	Scleropages_formosus
ENSNBRG00000009423	chd9	99	72.694	ENSSFOG00015001327	chd9	96	74.127	Scleropages_formosus
ENSNBRG00000009423	chd9	99	89.598	ENSSMAG00000008953	chd9	99	89.859	Scophthalmus_maximus
ENSNBRG00000009423	chd9	99	92.750	ENSSDUG00000006139	chd9	99	92.912	Seriola_dumerili
ENSNBRG00000009423	chd9	99	92.116	ENSSLDG00000017818	chd9	99	92.277	Seriola_lalandi_dorsalis
ENSNBRG00000009423	chd9	54	54.802	ENSSARG00000010632	CHD9	77	71.038	Sorex_araneus
ENSNBRG00000009423	chd9	99	92.794	ENSSPAG00000021649	chd9	99	92.351	Stegastes_partitus
ENSNBRG00000009423	chd9	99	60.382	ENSSSCG00000033591	CHD9	82	74.742	Sus_scrofa
ENSNBRG00000009423	chd9	86	72.393	ENSTGUG00000007476	CHD9	86	73.467	Taeniopygia_guttata
ENSNBRG00000009423	chd9	99	84.889	ENSTRUG00000009125	chd9	99	81.008	Takifugu_rubripes
ENSNBRG00000009423	chd9	67	85.377	ENSTNIG00000003825	chd9	85	99.408	Tetraodon_nigroviridis
ENSNBRG00000009423	chd9	60	93.220	ENSTBEG00000016052	-	64	93.220	Tupaia_belangeri
ENSNBRG00000009423	chd9	82	75.045	ENSTTRG00000012674	CHD9	77	71.235	Tursiops_truncatus
ENSNBRG00000009423	chd9	78	86.102	ENSUMAG00000004043	CHD9	95	86.102	Ursus_maritimus
ENSNBRG00000009423	chd9	71	75.833	ENSVPAG00000001374	CHD9	81	69.527	Vicugna_pacos
ENSNBRG00000009423	chd9	67	75.521	ENSVVUG00000019435	CHD9	84	71.302	Vulpes_vulpes
ENSNBRG00000009423	chd9	96	66.369	ENSXETG00000000349	chd9	78	75.774	Xenopus_tropicalis
ENSNBRG00000009423	chd9	99	87.304	ENSXCOG00000012997	chd9	99	87.956	Xiphophorus_couchianus
ENSNBRG00000009423	chd9	99	88.719	ENSXMAG00000016192	chd9	99	88.960	Xiphophorus_maculatus