EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000009511 (Gene tree)
Gene ID: 102782805
Gene Symbol: smg6
Alias: si:dkey-16f21.2
Full Name: telomerase-binding protein EST1A-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 17955 bases
Position: chrJH422512.1:136075-154029
Accession: 102782805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000012265	EST1	PF10374.9	2.5e-13	1	1
ENSNBRP00000012289	EST1	PF10374.9	7.4e-13	1	1
ENSNBRP00000012289	EST1_DNA_bind	PF10373.9	5e-54	1	1
ENSNBRP00000012265	EST1_DNA_bind	PF10373.9	2.7e-49	1	1
ENSNBRP00000012289	PIN_4	PF13638.6	2.8e-21	1	1
ENSNBRP00000012265	PIN_4	PF13638.6	2.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000012619	-	4440	XM_006808665	ENSNBRP00000012265	1479 (aa)	XP_006808728	-
ENSNBRT00000012643	-	4581	-	ENSNBRP00000012289	1526 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000009511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000009511's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000009511	smg6	81	54.667	ENSG00000070366	SMG6	100	58.659	Homo_sapiens
ENSNBRG00000009511	smg6	99	79.034	ENSAPOG00000019448	smg6	98	77.074	Acanthochromis_polyacanthus
ENSNBRG00000009511	smg6	81	54.560	ENSAMEG00000007632	SMG6	83	53.720	Ailuropoda_melanoleuca
ENSNBRG00000009511	smg6	99	84.973	ENSACIG00000012997	smg6	100	84.584	Amphilophus_citrinellus
ENSNBRG00000009511	smg6	99	79.499	ENSAOCG00000002630	smg6	98	77.689	Amphiprion_ocellaris
ENSNBRG00000009511	smg6	99	79.367	ENSAPEG00000019101	smg6	98	77.566	Amphiprion_percula
ENSNBRG00000009511	smg6	99	74.951	ENSATEG00000006483	smg6	98	72.127	Anabas_testudineus
ENSNBRG00000009511	smg6	68	48.436	ENSACAG00000011783	SMG6	88	47.550	Anolis_carolinensis
ENSNBRG00000009511	smg6	81	54.738	ENSANAG00000035760	SMG6	83	53.763	Aotus_nancymaae
ENSNBRG00000009511	smg6	99	96.105	ENSACLG00000005288	smg6	100	93.194	Astatotilapia_calliptera
ENSNBRG00000009511	smg6	78	68.857	ENSAMXG00000017326	smg6	90	68.391	Astyanax_mexicanus
ENSNBRG00000009511	smg6	83	54.033	ENSBTAG00000000267	SMG6	86	53.664	Bos_taurus
ENSNBRG00000009511	smg6	81	54.910	ENSCJAG00000001820	SMG6	83	53.888	Callithrix_jacchus
ENSNBRG00000009511	smg6	81	54.907	ENSCAFG00000019260	SMG6	87	52.477	Canis_familiaris
ENSNBRG00000009511	smg6	81	54.907	ENSCAFG00020009770	SMG6	87	52.477	Canis_lupus_dingo
ENSNBRG00000009511	smg6	81	55.118	ENSCHIG00000021998	SMG6	83	54.374	Capra_hircus
ENSNBRG00000009511	smg6	81	54.496	ENSTSYG00000003406	SMG6	100	58.287	Carlito_syrichta
ENSNBRG00000009511	smg6	76	53.630	ENSCAPG00000016197	SMG6	67	55.156	Cavia_aperea
ENSNBRG00000009511	smg6	83	53.359	ENSCPOG00000014878	SMG6	93	57.759	Cavia_porcellus
ENSNBRG00000009511	smg6	81	54.902	ENSCCAG00000035801	SMG6	83	54.046	Cebus_capucinus
ENSNBRG00000009511	smg6	100	48.951	ENSCATG00000031956	SMG6	88	52.206	Cercocebus_atys
ENSNBRG00000009511	smg6	87	52.142	ENSCLAG00000006748	SMG6	90	56.828	Chinchilla_lanigera
ENSNBRG00000009511	smg6	85	53.547	ENSCSAG00000013800	SMG6	88	52.506	Chlorocebus_sabaeus
ENSNBRG00000009511	smg6	100	48.127	ENSCPBG00000020369	SMG6	71	59.187	Chrysemys_picta_bellii
ENSNBRG00000009511	smg6	87	52.941	ENSCANG00000031764	SMG6	100	58.955	Colobus_angolensis_palliatus
ENSNBRG00000009511	smg6	80	50.394	ENSCGRG00000007782	Smg6	91	47.832	Cricetulus_griseus_crigri
ENSNBRG00000009511	smg6	99	69.312	ENSCSEG00000012757	smg6	98	68.579	Cynoglossus_semilaevis
ENSNBRG00000009511	smg6	99	67.855	ENSCVAG00000012789	smg6	97	66.605	Cyprinodon_variegatus
ENSNBRG00000009511	smg6	99	58.788	ENSDARG00000100481	smg6	98	56.015	Danio_rerio
ENSNBRG00000009511	smg6	81	54.510	ENSDNOG00000048283	SMG6	86	52.680	Dasypus_novemcinctus
ENSNBRG00000009511	smg6	81	59.050	ENSDORG00000016614	Smg6	87	58.754	Dipodomys_ordii
ENSNBRG00000009511	smg6	89	87.500	ENSETEG00000016790	SMG6	76	87.500	Echinops_telfairi
ENSNBRG00000009511	smg6	64	47.260	ENSEBUG00000005059	smg6	63	46.890	Eptatretus_burgeri
ENSNBRG00000009511	smg6	80	54.818	ENSEASG00005009318	SMG6	71	59.424	Equus_asinus_asinus
ENSNBRG00000009511	smg6	80	54.818	ENSECAG00000006519	SMG6	71	59.424	Equus_caballus
ENSNBRG00000009511	smg6	76	53.481	ENSEEUG00000003493	SMG6	77	59.777	Erinaceus_europaeus
ENSNBRG00000009511	smg6	83	73.606	ENSELUG00000005934	smg6	95	66.540	Esox_lucius
ENSNBRG00000009511	smg6	81	54.738	ENSFCAG00000028817	SMG6	72	58.878	Felis_catus
ENSNBRG00000009511	smg6	84	52.553	ENSFALG00000006538	SMG6	89	53.113	Ficedula_albicollis
ENSNBRG00000009511	smg6	87	52.475	ENSFDAG00000015106	SMG6	84	60.680	Fukomys_damarensis
ENSNBRG00000009511	smg6	100	66.852	ENSFHEG00000013282	smg6	97	67.037	Fundulus_heteroclitus
ENSNBRG00000009511	smg6	50	75.814	ENSGMOG00000019077	smg6	58	78.947	Gadus_morhua
ENSNBRG00000009511	smg6	84	52.489	ENSGALG00000003108	SMG6	85	52.429	Gallus_gallus
ENSNBRG00000009511	smg6	99	69.195	ENSGAFG00000000379	smg6	97	67.569	Gambusia_affinis
ENSNBRG00000009511	smg6	91	78.788	ENSGACG00000020521	smg6	99	80.000	Gasterosteus_aculeatus
ENSNBRG00000009511	smg6	81	53.365	ENSGAGG00000025617	SMG6	73	58.356	Gopherus_agassizii
ENSNBRG00000009511	smg6	81	54.667	ENSGGOG00000017156	SMG6	88	52.281	Gorilla_gorilla
ENSNBRG00000009511	smg6	99	95.702	ENSHBUG00000021311	smg6	98	93.035	Haplochromis_burtoni
ENSNBRG00000009511	smg6	87	51.672	ENSHGLG00000012882	SMG6	84	61.165	Heterocephalus_glaber_female
ENSNBRG00000009511	smg6	87	51.997	ENSHGLG00100017815	SMG6	84	61.165	Heterocephalus_glaber_male
ENSNBRG00000009511	smg6	70	69.411	ENSHCOG00000008761	smg6	83	70.409	Hippocampus_comes
ENSNBRG00000009511	smg6	99	56.070	ENSIPUG00000012493	smg6	98	52.648	Ictalurus_punctatus
ENSNBRG00000009511	smg6	81	52.441	ENSSTOG00000028127	SMG6	88	57.919	Ictidomys_tridecemlineatus
ENSNBRG00000009511	smg6	72	44.777	ENSJJAG00000015367	Smg6	79	48.202	Jaculus_jaculus
ENSNBRG00000009511	smg6	99	73.531	ENSKMAG00000000279	smg6	97	69.871	Kryptolebias_marmoratus
ENSNBRG00000009511	smg6	99	74.818	ENSLBEG00000002184	smg6	98	71.586	Labrus_bergylta
ENSNBRG00000009511	smg6	70	65.014	ENSLOCG00000006448	smg6	99	54.564	Lepisosteus_oculatus
ENSNBRG00000009511	smg6	100	47.909	ENSLAFG00000001261	SMG6	87	51.680	Loxodonta_africana
ENSNBRG00000009511	smg6	87	52.869	ENSMFAG00000003394	SMG6	88	52.506	Macaca_fascicularis
ENSNBRG00000009511	smg6	87	52.941	ENSMMUG00000023161	SMG6	88	52.580	Macaca_mulatta
ENSNBRG00000009511	smg6	85	51.567	ENSMNEG00000044592	SMG6	88	50.562	Macaca_nemestrina
ENSNBRG00000009511	smg6	82	59.532	ENSMLEG00000029353	SMG6	89	59.464	Mandrillus_leucophaeus
ENSNBRG00000009511	smg6	99	75.131	ENSMAMG00000020119	smg6	100	73.745	Mastacembelus_armatus
ENSNBRG00000009511	smg6	99	95.903	ENSMZEG00005024736	smg6	98	93.279	Maylandia_zebra
ENSNBRG00000009511	smg6	58	50.717	ENSMGAG00000005401	-	80	49.505	Meleagris_gallopavo
ENSNBRG00000009511	smg6	83	53.699	ENSMICG00000012913	SMG6	86	52.788	Microcebus_murinus
ENSNBRG00000009511	smg6	99	70.794	ENSMMOG00000010883	smg6	98	69.416	Mola_mola
ENSNBRG00000009511	smg6	100	48.695	ENSMODG00000010622	SMG6	74	58.797	Monodelphis_domestica
ENSNBRG00000009511	smg6	98	76.857	ENSMALG00000001106	smg6	98	73.023	Monopterus_albus
ENSNBRG00000009511	smg6	80	54.069	MGP_CAROLIEiJ_G0016729	Smg6	98	64.208	Mus_caroli
ENSNBRG00000009511	smg6	80	54.281	ENSMUSG00000038290	Smg6	96	65.352	Mus_musculus
ENSNBRG00000009511	smg6	80	54.203	MGP_PahariEiJ_G0017866	Smg6	96	64.804	Mus_pahari
ENSNBRG00000009511	smg6	80	54.203	MGP_SPRETEiJ_G0017572	Smg6	96	65.070	Mus_spretus
ENSNBRG00000009511	smg6	81	54.874	ENSMPUG00000013046	SMG6	72	59.537	Mustela_putorius_furo
ENSNBRG00000009511	smg6	85	53.403	ENSMLUG00000005739	SMG6	88	52.164	Myotis_lucifugus
ENSNBRG00000009511	smg6	81	52.923	ENSNGAG00000007287	Smg6	88	57.466	Nannospalax_galili
ENSNBRG00000009511	smg6	85	53.244	ENSNLEG00000017171	SMG6	100	58.659	Nomascus_leucogenys
ENSNBRG00000009511	smg6	81	54.346	ENSMEUG00000015804	SMG6	73	58.372	Notamacropus_eugenii
ENSNBRG00000009511	smg6	55	62.703	ENSOPRG00000000579	SMG6	79	63.441	Ochotona_princeps
ENSNBRG00000009511	smg6	79	58.692	ENSODEG00000008038	SMG6	81	55.357	Octodon_degus
ENSNBRG00000009511	smg6	99	94.694	ENSONIG00000005594	smg6	98	92.040	Oreochromis_niloticus
ENSNBRG00000009511	smg6	100	47.755	ENSOCUG00000013018	SMG6	71	59.519	Oryctolagus_cuniculus
ENSNBRG00000009511	smg6	99	67.795	ENSORLG00000003317	smg6	98	66.378	Oryzias_latipes
ENSNBRG00000009511	smg6	99	68.109	ENSORLG00020015343	smg6	97	66.232	Oryzias_latipes_hni
ENSNBRG00000009511	smg6	99	68.106	ENSORLG00015020454	smg6	98	66.667	Oryzias_latipes_hsok
ENSNBRG00000009511	smg6	99	67.485	ENSOMEG00000010838	smg6	97	66.811	Oryzias_melastigma
ENSNBRG00000009511	smg6	85	53.130	ENSOGAG00000004483	SMG6	88	51.448	Otolemur_garnettii
ENSNBRG00000009511	smg6	81	55.197	ENSOARG00000015076	SMG6	85	54.452	Ovis_aries
ENSNBRG00000009511	smg6	87	52.475	ENSPPAG00000043296	SMG6	85	52.955	Pan_paniscus
ENSNBRG00000009511	smg6	81	54.753	ENSPPRG00000014581	SMG6	72	59.685	Panthera_pardus
ENSNBRG00000009511	smg6	81	54.753	ENSPTIG00000008925	SMG6	100	58.659	Panthera_tigris_altaica
ENSNBRG00000009511	smg6	87	52.620	ENSPTRG00000008544	SMG6	100	58.659	Pan_troglodytes
ENSNBRG00000009511	smg6	85	53.473	ENSPANG00000024588	SMG6	88	52.431	Papio_anubis
ENSNBRG00000009511	smg6	75	51.169	ENSPSIG00000006660	SMG6	84	49.456	Pelodiscus_sinensis
ENSNBRG00000009511	smg6	94	80.365	ENSPMGG00000000844	smg6	97	80.365	Periophthalmus_magnuspinnatus
ENSNBRG00000009511	smg6	80	54.595	ENSPEMG00000020707	Smg6	89	57.014	Peromyscus_maniculatus_bairdii
ENSNBRG00000009511	smg6	99	70.417	ENSPFOG00000012035	smg6	97	71.717	Poecilia_formosa
ENSNBRG00000009511	smg6	99	70.324	ENSPLAG00000017660	smg6	97	68.210	Poecilia_latipinna
ENSNBRG00000009511	smg6	99	70.483	ENSPMEG00000000258	smg6	97	68.086	Poecilia_mexicana
ENSNBRG00000009511	smg6	99	69.815	ENSPREG00000010066	smg6	97	67.983	Poecilia_reticulata
ENSNBRG00000009511	smg6	81	50.627	ENSPPYG00000007790	SMG6	85	48.336	Pongo_abelii
ENSNBRG00000009511	smg6	85	50.335	ENSPCAG00000000552	SMG6	88	50.113	Procavia_capensis
ENSNBRG00000009511	smg6	83	53.430	ENSPCOG00000020925	SMG6	86	52.595	Propithecus_coquereli
ENSNBRG00000009511	smg6	80	50.945	ENSPVAG00000002159	SMG6	72	55.422	Pteropus_vampyrus
ENSNBRG00000009511	smg6	100	98.310	ENSPNYG00000024151	smg6	100	98.310	Pundamilia_nyererei
ENSNBRG00000009511	smg6	100	52.317	ENSPNAG00000015480	smg6	97	70.662	Pygocentrus_nattereri
ENSNBRG00000009511	smg6	83	53.061	ENSRNOG00000003041	Smg6	97	64.754	Rattus_norvegicus
ENSNBRG00000009511	smg6	100	49.299	ENSRBIG00000024746	SMG6	88	52.691	Rhinopithecus_bieti
ENSNBRG00000009511	smg6	100	49.142	ENSRROG00000030423	SMG6	100	58.955	Rhinopithecus_roxellana
ENSNBRG00000009511	smg6	81	54.667	ENSSBOG00000022518	SMG6	83	52.201	Saimiri_boliviensis_boliviensis
ENSNBRG00000009511	smg6	81	54.531	ENSSHAG00000010045	SMG6	71	58.965	Sarcophilus_harrisii
ENSNBRG00000009511	smg6	99	52.945	ENSSFOG00015005436	smg6	88	53.279	Scleropages_formosus
ENSNBRG00000009511	smg6	99	74.769	ENSSMAG00000019777	smg6	98	71.402	Scophthalmus_maximus
ENSNBRG00000009511	smg6	99	79.643	ENSSDUG00000016412	smg6	98	77.036	Seriola_dumerili
ENSNBRG00000009511	smg6	96	79.252	ENSSLDG00000020747	smg6	98	76.695	Seriola_lalandi_dorsalis
ENSNBRG00000009511	smg6	85	52.122	ENSSPUG00000007152	SMG6	89	51.485	Sphenodon_punctatus
ENSNBRG00000009511	smg6	99	79.354	ENSSPAG00000015633	smg6	98	77.368	Stegastes_partitus
ENSNBRG00000009511	smg6	81	55.118	ENSSSCG00000017826	SMG6	83	53.798	Sus_scrofa
ENSNBRG00000009511	smg6	84	52.392	ENSTGUG00000005836	SMG6	88	52.724	Taeniopygia_guttata
ENSNBRG00000009511	smg6	100	70.753	ENSTRUG00000000358	smg6	100	69.626	Takifugu_rubripes
ENSNBRG00000009511	smg6	100	65.519	ENSTNIG00000016164	smg6	96	74.595	Tetraodon_nigroviridis
ENSNBRG00000009511	smg6	81	52.317	ENSTBEG00000011424	SMG6	83	51.491	Tupaia_belangeri
ENSNBRG00000009511	smg6	71	55.683	ENSTTRG00000001175	SMG6	79	55.700	Tursiops_truncatus
ENSNBRG00000009511	smg6	81	54.254	ENSUAMG00000025152	SMG6	73	59.519	Ursus_americanus
ENSNBRG00000009511	smg6	81	54.481	ENSUMAG00000009306	SMG6	85	53.762	Ursus_maritimus
ENSNBRG00000009511	smg6	65	95.833	ENSVPAG00000000225	SMG6	70	95.833	Vicugna_pacos
ENSNBRG00000009511	smg6	81	55.556	ENSVVUG00000021727	SMG6	84	54.524	Vulpes_vulpes
ENSNBRG00000009511	smg6	71	54.932	ENSXETG00000023799	SMG6	85	50.594	Xenopus_tropicalis
ENSNBRG00000009511	smg6	100	69.075	ENSXCOG00000009867	smg6	99	68.404	Xiphophorus_couchianus
ENSNBRG00000009511	smg6	99	70.145	ENSXMAG00000010321	smg6	97	67.758	Xiphophorus_maculatus