EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000009535 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-113e8.6
Alias: -
Full Name: si:ch211-113e8.6
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 318 bases
Position: chrJH422301.1:4838055-4838372
Accession: ZDB-GENE-090313-13
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000012191	MMR_HSR1	PF01926.23	3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000012542	-	318	-	ENSNBRP00000012191	106 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000009535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000009535's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000009535	si:ch211-113e8.6	96	40.566	ENSNBRG00000020578	-	50	40.566
ENSNBRG00000009535	si:ch211-113e8.6	98	42.609	ENSNBRG00000002144	-	50	42.609
ENSNBRG00000009535	si:ch211-113e8.6	96	54.902	ENSNBRG00000023276	-	67	54.902
ENSNBRG00000009535	si:ch211-113e8.6	83	46.067	ENSNBRG00000024164	-	68	46.067
ENSNBRG00000009535	si:ch211-113e8.6	98	42.857	ENSNBRG00000003572	-	52	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000009535	si:ch211-113e8.6	96	51.485	ENSAPOG00000009059	-	55	51.485	Acanthochromis_polyacanthus
ENSNBRG00000009535	si:ch211-113e8.6	98	38.053	ENSACIG00000014730	zgc:172131	57	38.053	Amphilophus_citrinellus
ENSNBRG00000009535	si:ch211-113e8.6	98	38.053	ENSACIG00000014737	-	52	38.053	Amphilophus_citrinellus
ENSNBRG00000009535	si:ch211-113e8.6	96	50.980	ENSACIG00000022374	-	52	50.980	Amphilophus_citrinellus
ENSNBRG00000009535	si:ch211-113e8.6	98	50.476	ENSAPEG00000021653	si:dkey-73p2.1	74	50.476	Amphiprion_percula
ENSNBRG00000009535	si:ch211-113e8.6	98	47.115	ENSAPEG00000003513	-	72	47.115	Amphiprion_percula
ENSNBRG00000009535	si:ch211-113e8.6	99	40.000	ENSAPEG00000013532	-	54	40.000	Amphiprion_percula
ENSNBRG00000009535	si:ch211-113e8.6	96	51.961	ENSATEG00000011978	-	51	51.961	Anabas_testudineus
ENSNBRG00000009535	si:ch211-113e8.6	96	50.000	ENSATEG00000011891	-	63	50.000	Anabas_testudineus
ENSNBRG00000009535	si:ch211-113e8.6	91	45.833	ENSATEG00000011771	-	58	45.833	Anabas_testudineus
ENSNBRG00000009535	si:ch211-113e8.6	98	35.577	ENSACLG00000011585	-	50	35.577	Astatotilapia_calliptera
ENSNBRG00000009535	si:ch211-113e8.6	96	49.020	ENSACLG00000005232	-	52	49.020	Astatotilapia_calliptera
ENSNBRG00000009535	si:ch211-113e8.6	92	45.918	ENSAMXG00000031676	-	57	45.918	Astyanax_mexicanus
ENSNBRG00000009535	si:ch211-113e8.6	98	41.905	ENSAMXG00000033374	-	70	41.905	Astyanax_mexicanus
ENSNBRG00000009535	si:ch211-113e8.6	98	47.115	ENSAMXG00000043950	-	51	47.115	Astyanax_mexicanus
ENSNBRG00000009535	si:ch211-113e8.6	98	51.429	ENSAMXG00000042848	-	52	51.429	Astyanax_mexicanus
ENSNBRG00000009535	si:ch211-113e8.6	96	46.154	ENSAMXG00000042475	-	65	46.154	Astyanax_mexicanus
ENSNBRG00000009535	si:ch211-113e8.6	98	48.077	ENSAMXG00000034405	-	73	48.077	Astyanax_mexicanus
ENSNBRG00000009535	si:ch211-113e8.6	98	68.269	ENSCSEG00000001225	si:ch211-113e8.6	71	68.269	Cynoglossus_semilaevis
ENSNBRG00000009535	si:ch211-113e8.6	98	42.593	ENSDARG00000088906	CABZ01059403.1	53	42.593	Danio_rerio
ENSNBRG00000009535	si:ch211-113e8.6	98	50.962	ENSDARG00000074610	si:ch211-113e8.6	74	50.962	Danio_rerio
ENSNBRG00000009535	si:ch211-113e8.6	79	38.095	ENSHBUG00000000685	-	59	38.095	Haplochromis_burtoni
ENSNBRG00000009535	si:ch211-113e8.6	98	45.714	ENSIPUG00000000074	-	60	45.714	Ictalurus_punctatus
ENSNBRG00000009535	si:ch211-113e8.6	79	46.429	ENSIPUG00000007177	-	66	46.429	Ictalurus_punctatus
ENSNBRG00000009535	si:ch211-113e8.6	98	43.810	ENSIPUG00000000911	-	52	43.810	Ictalurus_punctatus
ENSNBRG00000009535	si:ch211-113e8.6	96	49.020	ENSKMAG00000010997	-	54	49.020	Kryptolebias_marmoratus
ENSNBRG00000009535	si:ch211-113e8.6	98	50.000	ENSLBEG00000017980	-	65	50.000	Labrus_bergylta
ENSNBRG00000009535	si:ch211-113e8.6	96	52.941	ENSLBEG00000017965	-	55	52.941	Labrus_bergylta
ENSNBRG00000009535	si:ch211-113e8.6	98	48.077	ENSMAMG00000012570	-	64	48.077	Mastacembelus_armatus
ENSNBRG00000009535	si:ch211-113e8.6	98	36.538	ENSMZEG00005020531	-	52	36.538	Maylandia_zebra
ENSNBRG00000009535	si:ch211-113e8.6	57	45.000	ENSMZEG00005000312	-	55	45.000	Maylandia_zebra
ENSNBRG00000009535	si:ch211-113e8.6	96	48.039	ENSMZEG00005027842	-	55	48.039	Maylandia_zebra
ENSNBRG00000009535	si:ch211-113e8.6	97	31.068	ENSMZEG00005027522	-	52	31.068	Maylandia_zebra
ENSNBRG00000009535	si:ch211-113e8.6	98	36.283	ENSONIG00000012666	-	51	36.283	Oreochromis_niloticus
ENSNBRG00000009535	si:ch211-113e8.6	98	38.095	ENSONIG00000012661	-	52	33.929	Oreochromis_niloticus
ENSNBRG00000009535	si:ch211-113e8.6	100	95.192	ENSONIG00000009177	-	51	95.192	Oreochromis_niloticus
ENSNBRG00000009535	si:ch211-113e8.6	98	37.838	ENSONIG00000020856	-	50	37.838	Oreochromis_niloticus
ENSNBRG00000009535	si:ch211-113e8.6	98	36.538	ENSONIG00000017884	-	55	36.538	Oreochromis_niloticus
ENSNBRG00000009535	si:ch211-113e8.6	98	38.679	ENSORLG00015018237	-	69	38.679	Oryzias_latipes_hsok
ENSNBRG00000009535	si:ch211-113e8.6	92	43.434	ENSORLG00015018187	-	57	43.434	Oryzias_latipes_hsok
ENSNBRG00000009535	si:ch211-113e8.6	98	33.333	ENSOMEG00000018354	-	53	33.333	Oryzias_melastigma
ENSNBRG00000009535	si:ch211-113e8.6	93	42.424	ENSPKIG00000014014	zgc:172131	51	42.424	Paramormyrops_kingsleyae
ENSNBRG00000009535	si:ch211-113e8.6	92	54.082	ENSPMGG00000001115	-	53	54.082	Periophthalmus_magnuspinnatus
ENSNBRG00000009535	si:ch211-113e8.6	89	51.064	ENSPMGG00000009271	-	70	51.064	Periophthalmus_magnuspinnatus
ENSNBRG00000009535	si:ch211-113e8.6	82	42.529	ENSPMGG00000013552	-	81	42.529	Periophthalmus_magnuspinnatus
ENSNBRG00000009535	si:ch211-113e8.6	92	45.455	ENSPMGG00000008403	-	68	45.455	Periophthalmus_magnuspinnatus
ENSNBRG00000009535	si:ch211-113e8.6	100	47.170	ENSPMGG00000008073	-	57	48.515	Periophthalmus_magnuspinnatus
ENSNBRG00000009535	si:ch211-113e8.6	98	36.538	ENSPFOG00000004636	-	50	36.538	Poecilia_formosa
ENSNBRG00000009535	si:ch211-113e8.6	85	43.956	ENSPMEG00000021963	-	71	43.956	Poecilia_mexicana
ENSNBRG00000009535	si:ch211-113e8.6	92	52.041	ENSPMEG00000014325	-	50	52.041	Poecilia_mexicana
ENSNBRG00000009535	si:ch211-113e8.6	93	45.000	ENSPMEG00000019710	-	52	45.000	Poecilia_mexicana
ENSNBRG00000009535	si:ch211-113e8.6	98	37.500	ENSPREG00000010694	-	51	37.500	Poecilia_reticulata
ENSNBRG00000009535	si:ch211-113e8.6	98	40.385	ENSPREG00000005902	-	50	40.385	Poecilia_reticulata
ENSNBRG00000009535	si:ch211-113e8.6	98	36.538	ENSPNYG00000021131	-	52	36.538	Pundamilia_nyererei
ENSNBRG00000009535	si:ch211-113e8.6	96	50.980	ENSPNYG00000004146	-	66	50.980	Pundamilia_nyererei
ENSNBRG00000009535	si:ch211-113e8.6	100	42.857	ENSPNAG00000008976	-	52	42.857	Pygocentrus_nattereri
ENSNBRG00000009535	si:ch211-113e8.6	92	47.000	ENSSLDG00000009117	-	50	47.000	Seriola_lalandi_dorsalis
ENSNBRG00000009535	si:ch211-113e8.6	96	52.941	ENSSLDG00000024641	-	52	52.941	Seriola_lalandi_dorsalis
ENSNBRG00000009535	si:ch211-113e8.6	98	30.973	ENSSPAG00000012885	-	53	30.973	Stegastes_partitus
ENSNBRG00000009535	si:ch211-113e8.6	98	49.038	ENSSPAG00000013831	-	67	50.000	Stegastes_partitus
ENSNBRG00000009535	si:ch211-113e8.6	98	39.423	ENSSPAG00000020351	-	52	39.423	Stegastes_partitus
ENSNBRG00000009535	si:ch211-113e8.6	96	51.961	ENSSPAG00000016454	-	52	51.961	Stegastes_partitus
ENSNBRG00000009535	si:ch211-113e8.6	98	43.925	ENSTNIG00000001262	-	50	43.925	Tetraodon_nigroviridis
ENSNBRG00000009535	si:ch211-113e8.6	98	41.346	ENSXCOG00000014967	zgc:172131	50	41.346	Xiphophorus_couchianus
ENSNBRG00000009535	si:ch211-113e8.6	98	46.154	ENSXMAG00000024908	-	50	46.154	Xiphophorus_maculatus