EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNBRG00000009672 (Gene tree)
Gene ID
102785766
Gene Symbol
RPA1 (1 of many)
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A 70 kDa DNA-binding subunit-like
Gene Type
protein_coding
Species
Neolamprologus_brichardi
Status
putative
Strand
Minus strand
Length
44521 bases
Position
chrJH422512.1:378508-423028
Accession
102785766
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNBRP00000012421tRNA_anti-codonPF01336.253e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNBRT00000012779RPA1 (1 of many)-2011800XM_006808675ENSNBRP00000012421599 (aa)XP_006808738-
Gene Model
Click here to download ENSNBRG00000009672's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000009672's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNBRG00000009672RPA19362.081ENSNBRG00000020595rpa19962.081
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNBRG00000009672RPA19766.910ENSAPOG00000019409RPA19966.910Acanthochromis_polyacanthus
ENSNBRG00000009672RPA19759.567ENSAPOG00000011658rpa19961.199Acanthochromis_polyacanthus
ENSNBRG00000009672RPA19557.744ENSAMEG00000007706RPA19657.744Ailuropoda_melanoleuca
ENSNBRG00000009672RPA19483.080ENSACIG00000012881RPA110083.080Amphilophus_citrinellus
ENSNBRG00000009672RPA19457.317ENSACIG00000007277rpa19957.317Amphilophus_citrinellus
ENSNBRG00000009672RPA19771.540ENSAOCG00000009003RPA19872.006Amphiprion_ocellaris
ENSNBRG00000009672RPA19760.870ENSAOCG00000023376rpa19961.905Amphiprion_ocellaris
ENSNBRG00000009672RPA19760.702ENSAPEG00000008634rpa19961.552Amphiprion_percula
ENSNBRG00000009672RPA19770.213ENSAPEG00000019132RPA19870.365Amphiprion_percula
ENSNBRG00000009672RPA19771.451ENSATEG00000006443RPA19871.451Anabas_testudineus
ENSNBRG00000009672RPA19360.664ENSATEG00000022024rpa19960.664Anabas_testudineus
ENSNBRG00000009672RPA19649.410ENSAPLG00000012442RPA110049.410Anas_platyrhynchos
ENSNBRG00000009672RPA19652.862ENSACAG00000014490RPA19753.199Anolis_carolinensis
ENSNBRG00000009672RPA19557.414ENSANAG00000023456RPA19857.414Aotus_nancymaae
ENSNBRG00000009672RPA19786.120ENSACLG00000005223RPA19986.120Astatotilapia_calliptera
ENSNBRG00000009672RPA19262.811ENSACLG00000006640rpa19962.811Astatotilapia_calliptera
ENSNBRG00000009672RPA19760.302ENSAMXG00000008418rpa19961.073Astyanax_mexicanus
ENSNBRG00000009672RPA19555.649ENSBTAG00000009711RPA19655.649Bos_taurus
ENSNBRG00000009672RPA19555.649ENSCJAG00000001848RPA19655.987Callithrix_jacchus
ENSNBRG00000009672RPA19556.324ENSCAFG00000019249RPA19656.661Canis_familiaris
ENSNBRG00000009672RPA19556.324ENSCAFG00020009847RPA19656.661Canis_lupus_dingo
ENSNBRG00000009672RPA19754.380ENSCHIG00000026308RPA19854.876Capra_hircus
ENSNBRG00000009672RPA19556.229ENSTSYG00000003482-9656.229Carlito_syrichta
ENSNBRG00000009672RPA19554.975ENSCPOG00000000035RPA19654.975Cavia_porcellus
ENSNBRG00000009672RPA19547.774ENSCCAG00000010981RPA19648.288Cebus_capucinus
ENSNBRG00000009672RPA19552.534ENSCLAG00000015045-9652.534Chinchilla_lanigera
ENSNBRG00000009672RPA19555.818ENSCLAG00000005185-9655.818Chinchilla_lanigera
ENSNBRG00000009672RPA19547.603ENSCSAG00000013833RPA19648.116Chlorocebus_sabaeus
ENSNBRG00000009672RPA17161.468ENSCHOG00000009454-9961.468Choloepus_hoffmanni
ENSNBRG00000009672RPA19454.778ENSCHOG00000013540-9954.778Choloepus_hoffmanni
ENSNBRG00000009672RPA19755.941ENSCPBG00000020377RPA19956.918Chrysemys_picta_bellii
ENSNBRG00000009672RPA19742.000ENSCING00000023482-9842.000Ciona_intestinalis
ENSNBRG00000009672RPA19557.069ENSCANG00000030911RPA19857.069Colobus_angolensis_palliatus
ENSNBRG00000009672RPA19455.556ENSCGRG00001008197Rpa19655.556Cricetulus_griseus_chok1gshd
ENSNBRG00000009672RPA17160.829ENSCGRG00000000582Rpa18560.829Cricetulus_griseus_crigri
ENSNBRG00000009672RPA19759.136ENSCSEG00000013066rpa19859.136Cynoglossus_semilaevis
ENSNBRG00000009672RPA19762.761ENSCSEG00000012726RPA19963.543Cynoglossus_semilaevis
ENSNBRG00000009672RPA19759.635ENSCVAG00000019431rpa19960.932Cyprinodon_variegatus
ENSNBRG00000009672RPA18669.270ENSCVAG00000013446-8869.270Cyprinodon_variegatus
ENSNBRG00000009672RPA19760.365ENSDARG00000003938rpa19860.365Danio_rerio
ENSNBRG00000009672RPA19555.987ENSDNOG00000017218RPA19655.987Dasypus_novemcinctus
ENSNBRG00000009672RPA19556.830ENSDORG00000006199Rpa19756.514Dipodomys_ordii
ENSNBRG00000009672RPA19737.604FBgn0010173RpA-709738.103Drosophila_melanogaster
ENSNBRG00000009672RPA17853.944ENSETEG00000017608RPA17953.944Echinops_telfairi
ENSNBRG00000009672RPA19656.928ENSEASG00005009372RPA19957.699Equus_asinus_asinus
ENSNBRG00000009672RPA19556.830ENSECAG00000023886RPA19656.830Equus_caballus
ENSNBRG00000009672RPA16860.526ENSEEUG00000002186-6860.526Erinaceus_europaeus
ENSNBRG00000009672RPA19761.628ENSELUG00000021071rpa19861.628Esox_lucius
ENSNBRG00000009672RPA18659.701ENSELUG00000006136RPA19959.701Esox_lucius
ENSNBRG00000009672RPA19556.784ENSFCAG00000006306RPA19656.784Felis_catus
ENSNBRG00000009672RPA19754.530ENSFALG00000006575RPA19854.530Ficedula_albicollis
ENSNBRG00000009672RPA19556.449ENSFDAG00000007720RPA19756.449Fukomys_damarensis
ENSNBRG00000009672RPA19760.434ENSFHEG00000003580rpa19860.434Fundulus_heteroclitus
ENSNBRG00000009672RPA19759.122ENSGMOG00000010382rpa19859.291Gadus_morhua
ENSNBRG00000009672RPA19754.305ENSGALG00000003072RPA19854.305Gallus_gallus
ENSNBRG00000009672RPA19768.203ENSGAFG00000020953RPA19967.945Gambusia_affinis
ENSNBRG00000009672RPA19759.799ENSGAFG00000012916rpa19760.870Gambusia_affinis
ENSNBRG00000009672RPA19759.296ENSGACG00000010856rpa19859.296Gasterosteus_aculeatus
ENSNBRG00000009672RPA19755.941ENSGAGG00000013611RPA19855.941Gopherus_agassizii
ENSNBRG00000009672RPA19556.897ENSGGOG00000014186RPA19656.897Gorilla_gorilla
ENSNBRG00000009672RPA19479.401ENSHBUG00000009348RPA19979.401Haplochromis_burtoni
ENSNBRG00000009672RPA19761.204ENSHBUG00000017773rpa19861.204Haplochromis_burtoni
ENSNBRG00000009672RPA19555.387ENSHGLG00000008846RPA19756.324Heterocephalus_glaber_female
ENSNBRG00000009672RPA19555.387ENSHGLG00100017755-9756.324Heterocephalus_glaber_male
ENSNBRG00000009672RPA18651.509ENSHGLG00100002005-8852.830Heterocephalus_glaber_male
ENSNBRG00000009672RPA19552.517ENSHGLG00100000799-9652.517Heterocephalus_glaber_male
ENSNBRG00000009672RPA19753.530ENSHCOG00000001401rpa19854.050Hippocampus_comes
ENSNBRG00000009672RPA19249.648ENSHCOG00000000351RPA19349.648Hippocampus_comes
ENSNBRG00000009672RPA19760.132ENSIPUG00000004400rpa19860.132Ictalurus_punctatus
ENSNBRG00000009672RPA19354.045ENSSTOG00000022475RPA19754.045Ictidomys_tridecemlineatus
ENSNBRG00000009672RPA19457.143ENSJJAG00000000876Rpa19857.143Jaculus_jaculus
ENSNBRG00000009672RPA19758.553ENSKMAG00000005605rpa19858.979Kryptolebias_marmoratus
ENSNBRG00000009672RPA19771.429ENSKMAG00000000234RPA19971.429Kryptolebias_marmoratus
ENSNBRG00000009672RPA19762.143ENSLBEG00000002281RPA19961.429Labrus_bergylta
ENSNBRG00000009672RPA19758.306ENSLBEG00000021604rpa19858.140Labrus_bergylta
ENSNBRG00000009672RPA17953.469ENSLACG00000007210RPA19753.469Latimeria_chalumnae
ENSNBRG00000009672RPA19758.609ENSLOCG00000006397rpa19858.609Lepisosteus_oculatus
ENSNBRG00000009672RPA19555.316ENSLAFG00000015354RPA19655.316Loxodonta_africana
ENSNBRG00000009672RPA18057.863ENSMFAG00000036138-9858.468Macaca_fascicularis
ENSNBRG00000009672RPA19551.946ENSMMUG00000002442-9651.946Macaca_mulatta
ENSNBRG00000009672RPA19555.481ENSMMUG00000011604-9855.987Macaca_mulatta
ENSNBRG00000009672RPA19548.797ENSMNEG00000029837-9648.797Macaca_nemestrina
ENSNBRG00000009672RPA19454.932ENSMNEG00000031632-9855.442Macaca_nemestrina
ENSNBRG00000009672RPA19550.997ENSMLEG00000038768-9852.181Mandrillus_leucophaeus
ENSNBRG00000009672RPA19768.966ENSMAMG00000020097RPA19968.966Mastacembelus_armatus
ENSNBRG00000009672RPA19759.832ENSMAMG00000017993rpa19959.612Mastacembelus_armatus
ENSNBRG00000009672RPA19786.120ENSMZEG00005024731RPA19986.120Maylandia_zebra
ENSNBRG00000009672RPA19761.037ENSMZEG00005007551rpa19861.037Maylandia_zebra
ENSNBRG00000009672RPA19754.153ENSMGAG00000005315RPA19854.153Meleagris_gallopavo
ENSNBRG00000009672RPA19555.499ENSMAUG00000010474Rpa19855.838Mesocricetus_auratus
ENSNBRG00000009672RPA19556.514ENSMICG00000012867RPA19656.514Microcebus_murinus
ENSNBRG00000009672RPA19655.853ENSMOCG00000013019Rpa19755.853Microtus_ochrogaster
ENSNBRG00000009672RPA19874.037ENSMMOG00000010868RPA19974.037Mola_mola
ENSNBRG00000009672RPA19561.329ENSMMOG00000014292rpa19961.329Mola_mola
ENSNBRG00000009672RPA19556.081ENSMODG00000010549RPA19656.081Monodelphis_domestica
ENSNBRG00000009672RPA19778.252ENSMALG00000001208RPA19478.252Monopterus_albus
ENSNBRG00000009672RPA19658.932ENSMALG00000011453rpa19858.765Monopterus_albus
ENSNBRG00000009672RPA19556.734MGP_CAROLIEiJ_G0016734Rpa19656.734Mus_caroli
ENSNBRG00000009672RPA19555.721ENSMUSG00000000751Rpa19655.721Mus_musculus
ENSNBRG00000009672RPA19555.833MGP_PahariEiJ_G0017871Rpa19655.833Mus_pahari
ENSNBRG00000009672RPA19555.795MGP_SPRETEiJ_G0017577Rpa19655.795Mus_spretus
ENSNBRG00000009672RPA19556.998ENSMPUG00000013119RPA19656.998Mustela_putorius_furo
ENSNBRG00000009672RPA19555.649ENSMLUG00000006113RPA19555.649Myotis_lucifugus
ENSNBRG00000009672RPA19555.167ENSNGAG00000004522Rpa19655.167Nannospalax_galili
ENSNBRG00000009672RPA19555.892ENSNLEG00000017149RPA19656.661Nomascus_leucogenys
ENSNBRG00000009672RPA19548.223ENSMEUG00000006714RPA19848.235Notamacropus_eugenii
ENSNBRG00000009672RPA19454.774ENSODEG00000009038RPA19654.774Octodon_degus
ENSNBRG00000009672RPA19759.508ENSONIG00000013135rpa19859.508Oreochromis_niloticus
ENSNBRG00000009672RPA19656.000ENSOANG00000010880RPA19956.000Ornithorhynchus_anatinus
ENSNBRG00000009672RPA19553.130ENSOCUG00000001504RPA19654.006Oryctolagus_cuniculus
ENSNBRG00000009672RPA19760.000ENSORLG00000004856rpa19860.000Oryzias_latipes
ENSNBRG00000009672RPA19767.435ENSORLG00000003368RPA19867.435Oryzias_latipes
ENSNBRG00000009672RPA19759.832ENSORLG00020008980rpa19859.832Oryzias_latipes_hni
ENSNBRG00000009672RPA19765.611ENSORLG00020015284RPA19965.611Oryzias_latipes_hni
ENSNBRG00000009672RPA16581.519ENSORLG00015005867-9081.519Oryzias_latipes_hsok
ENSNBRG00000009672RPA19768.388ENSORLG00015020383RPA19868.388Oryzias_latipes_hsok
ENSNBRG00000009672RPA19759.832ENSORLG00015013982rpa19859.832Oryzias_latipes_hsok
ENSNBRG00000009672RPA19758.194ENSOMEG00000004704rpa19859.259Oryzias_melastigma
ENSNBRG00000009672RPA19274.061ENSOMEG00000011040RPA19974.061Oryzias_melastigma
ENSNBRG00000009672RPA17254.974ENSOGAG00000029379-9554.974Otolemur_garnettii
ENSNBRG00000009672RPA19555.818ENSOGAG00000005581-9655.818Otolemur_garnettii
ENSNBRG00000009672RPA19554.975ENSOARG00000014479RPA19655.481Ovis_aries
ENSNBRG00000009672RPA19655.760ENSPPAG00000039680RPA19756.667Pan_paniscus
ENSNBRG00000009672RPA19557.119ENSPPRG00000011807RPA19657.119Panthera_pardus
ENSNBRG00000009672RPA19557.119ENSPTIG00000007898RPA19657.119Panthera_tigris_altaica
ENSNBRG00000009672RPA19655.593ENSPTRG00000008539RPA19756.667Pan_troglodytes
ENSNBRG00000009672RPA19555.649ENSPANG00000024592RPA19755.629Papio_anubis
ENSNBRG00000009672RPA18663.258ENSPKIG00000008053rpa18664.137Paramormyrops_kingsleyae
ENSNBRG00000009672RPA19555.537ENSPSIG00000015617RPA19855.537Pelodiscus_sinensis
ENSNBRG00000009672RPA19460.976ENSPMGG00000011589rpa19860.976Periophthalmus_magnuspinnatus
ENSNBRG00000009672RPA19964.098ENSPMGG00000000543RPA19967.914Periophthalmus_magnuspinnatus
ENSNBRG00000009672RPA19753.355ENSPEMG00000021061Rpa19953.355Peromyscus_maniculatus_bairdii
ENSNBRG00000009672RPA19554.257ENSPCIG00000019049RPA19655.818Phascolarctos_cinereus
ENSNBRG00000009672RPA19760.403ENSPFOG00000003987rpa19860.403Poecilia_formosa
ENSNBRG00000009672RPA18672.007ENSPLAG00000008844-8972.535Poecilia_latipinna
ENSNBRG00000009672RPA19760.235ENSPLAG00000004984rpa19860.235Poecilia_latipinna
ENSNBRG00000009672RPA18672.183ENSPMEG00000003627-8971.705Poecilia_mexicana
ENSNBRG00000009672RPA19760.403ENSPMEG00000020602rpa19960.993Poecilia_mexicana
ENSNBRG00000009672RPA18657.634ENSPREG00000010174rpa18757.634Poecilia_reticulata
ENSNBRG00000009672RPA19766.269ENSPREG00000010119RPA19965.723Poecilia_reticulata
ENSNBRG00000009672RPA19556.345ENSPCOG00000001799RPA19656.345Propithecus_coquereli
ENSNBRG00000009672RPA19556.324ENSPVAG00000002149RPA19656.324Pteropus_vampyrus
ENSNBRG00000009672RPA19786.278ENSPNYG00000024165RPA19986.278Pundamilia_nyererei
ENSNBRG00000009672RPA19761.204ENSPNYG00000016316rpa19962.766Pundamilia_nyererei
ENSNBRG00000009672RPA19754.530ENSPNAG00000008599rpa19654.878Pygocentrus_nattereri
ENSNBRG00000009672RPA19557.614ENSRNOG00000003123Rpa19656.757Rattus_norvegicus
ENSNBRG00000009672RPA19555.818ENSRBIG00000036587RPA19655.818Rhinopithecus_bieti
ENSNBRG00000009672RPA19554.110ENSRROG00000043278RPA19654.110Rhinopithecus_roxellana
ENSNBRG00000009672RPA19230.940YAR007CRFA19330.940Saccharomyces_cerevisiae
ENSNBRG00000009672RPA18956.452ENSSBOG00000030233RPA19756.810Saimiri_boliviensis_boliviensis
ENSNBRG00000009672RPA19556.734ENSSHAG00000007969RPA19656.734Sarcophilus_harrisii
ENSNBRG00000009672RPA19762.689ENSSFOG00015005362rpa19162.689Scleropages_formosus
ENSNBRG00000009672RPA19767.890ENSSMAG00000019746RPA19867.890Scophthalmus_maximus
ENSNBRG00000009672RPA19770.431ENSSDUG00000016358RPA19969.837Seriola_dumerili
ENSNBRG00000009672RPA19760.535ENSSDUG00000011949rpa19860.535Seriola_dumerili
ENSNBRG00000009672RPA19760.201ENSSLDG00000011806rpa19860.201Seriola_lalandi_dorsalis
ENSNBRG00000009672RPA19769.322ENSSLDG00000020784RPA19968.879Seriola_lalandi_dorsalis
ENSNBRG00000009672RPA18665.625ENSSARG00000007506RPA18765.625Sorex_araneus
ENSNBRG00000009672RPA19554.515ENSSPUG00000007223RPA19854.515Sphenodon_punctatus
ENSNBRG00000009672RPA19760.672ENSSPAG00000009903rpa19860.672Stegastes_partitus
ENSNBRG00000009672RPA19875.000ENSSPAG00000011165RPA19975.000Stegastes_partitus
ENSNBRG00000009672RPA19557.069ENSSSCG00000017822RPA19856.661Sus_scrofa
ENSNBRG00000009672RPA19754.530ENSTGUG00000005775RPA19854.530Taeniopygia_guttata
ENSNBRG00000009672RPA19858.814ENSTRUG00000003616rpa19958.814Takifugu_rubripes
ENSNBRG00000009672RPA19775.053ENSTRUG00000000405RPA19875.053Takifugu_rubripes
ENSNBRG00000009672RPA19760.033ENSTNIG00000016199rpa19860.033Tetraodon_nigroviridis
ENSNBRG00000009672RPA17760.731ENSTBEG00000002709RPA17960.731Tupaia_belangeri
ENSNBRG00000009672RPA19654.424ENSTTRG00000001169RPA19754.742Tursiops_truncatus
ENSNBRG00000009672RPA18875.000ENSUAMG00000015676RPA19875.000Ursus_americanus
ENSNBRG00000009672RPA19558.103ENSUMAG00000009328RPA19658.103Ursus_maritimus
ENSNBRG00000009672RPA19753.477ENSVPAG00000009443RPA19853.477Vicugna_pacos
ENSNBRG00000009672RPA19556.566ENSVVUG00000021715RPA19656.902Vulpes_vulpes
ENSNBRG00000009672RPA19856.814ENSXETG00000013538rpa19957.049Xenopus_tropicalis
ENSNBRG00000009672RPA19471.254ENSXCOG00000009899-9971.254Xiphophorus_couchianus
ENSNBRG00000009672RPA18663.198ENSXCOG00000010068rpa18863.198Xiphophorus_couchianus
ENSNBRG00000009672RPA19759.966ENSXMAG00000004102rpa19960.746Xiphophorus_maculatus
ENSNBRG00000009672RPA19775.789ENSXMAG00000010333RPA19375.789Xiphophorus_maculatus

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