EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000009708 (Gene tree)
Gene ID: -
Gene Symbol: pabpc4
Alias: -
Full Name: poly(A) binding protein%2C cytoplasmic 4 (inducible form)
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 5445 bases
Position: chrJH422346.1:2927484-2932928
Accession: ZDB-GENE-030131-9663
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000012441	RRM_1	PF00076.22	3.9e-50	1	2
ENSNBRP00000012441	RRM_1	PF00076.22	3.9e-50	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000012799	-	639	-	ENSNBRP00000012441	212 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000009708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000009708's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000009708	pabpc4	97	32.895	ENSNBRG00000006218	-	90	33.113
ENSNBRG00000009708	pabpc4	98	91.304	ENSNBRG00000013737	pabpc1b	65	91.304
ENSNBRG00000009708	pabpc4	96	41.176	ENSNBRG00000010047	-	59	41.176
ENSNBRG00000009708	pabpc4	71	30.818	ENSNBRG00000001758	trnau1apa	52	30.818
ENSNBRG00000009708	pabpc4	98	90.865	ENSNBRG00000003068	-	69	90.625
ENSNBRG00000009708	pabpc4	98	82.692	ENSNBRG00000016633	pabpc1l	71	82.292
ENSNBRG00000009708	pabpc4	97	34.000	ENSNBRG00000021290	elavl1a	88	34.000
ENSNBRG00000009708	pabpc4	97	30.994	ENSNBRG00000011319	tia1l	66	30.994
ENSNBRG00000009708	pabpc4	97	36.145	ENSNBRG00000010319	elavl3	65	36.145
ENSNBRG00000009708	pabpc4	97	30.769	ENSNBRG00000016849	tial1	85	32.773
ENSNBRG00000009708	pabpc4	62	34.940	ENSNBRG00000023764	-	64	34.940

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000009708	pabpc4	97	96.667	ENSG00000090621	PABPC4	99	96.396	Homo_sapiens
ENSNBRG00000009708	pabpc4	98	98.558	ENSAPOG00000001161	pabpc4	60	98.558	Acanthochromis_polyacanthus
ENSNBRG00000009708	pabpc4	98	59.512	ENSAMEG00000015083	-	50	59.512	Ailuropoda_melanoleuca
ENSNBRG00000009708	pabpc4	98	92.308	ENSAMEG00000011535	-	57	92.308	Ailuropoda_melanoleuca
ENSNBRG00000009708	pabpc4	98	99.038	ENSACIG00000023343	pabpc4	59	99.038	Amphilophus_citrinellus
ENSNBRG00000009708	pabpc4	98	98.558	ENSAOCG00000021529	pabpc4	62	98.558	Amphiprion_ocellaris
ENSNBRG00000009708	pabpc4	98	98.558	ENSAPEG00000019196	pabpc4	60	98.558	Amphiprion_percula
ENSNBRG00000009708	pabpc4	98	99.038	ENSATEG00000007402	pabpc4	60	99.038	Anabas_testudineus
ENSNBRG00000009708	pabpc4	98	96.618	ENSAPLG00000009729	-	61	96.618	Anas_platyrhynchos
ENSNBRG00000009708	pabpc4	98	97.260	ENSACAG00000002544	PABPC4	56	97.260	Anolis_carolinensis
ENSNBRG00000009708	pabpc4	98	92.788	ENSANAG00000025079	PABPC4	59	92.788	Aotus_nancymaae
ENSNBRG00000009708	pabpc4	98	99.519	ENSACLG00000019558	pabpc4	60	99.519	Astatotilapia_calliptera
ENSNBRG00000009708	pabpc4	98	98.077	ENSAMXG00000018779	pabpc4	62	98.077	Astyanax_mexicanus
ENSNBRG00000009708	pabpc4	95	88.312	ENSBTAG00000048536	-	88	88.312	Bos_taurus
ENSNBRG00000009708	pabpc4	98	92.788	ENSBTAG00000017125	PABPC4	58	92.788	Bos_taurus
ENSNBRG00000009708	pabpc4	98	92.788	ENSCJAG00000002512	-	59	92.788	Callithrix_jacchus
ENSNBRG00000009708	pabpc4	98	92.788	ENSCAFG00000003081	PABPC4	59	92.788	Canis_familiaris
ENSNBRG00000009708	pabpc4	98	92.788	ENSCAFG00020004161	PABPC4	57	92.788	Canis_lupus_dingo
ENSNBRG00000009708	pabpc4	98	83.654	ENSCHIG00000023385	-	59	83.654	Capra_hircus
ENSNBRG00000009708	pabpc4	98	92.788	ENSCHIG00000019398	-	57	92.788	Capra_hircus
ENSNBRG00000009708	pabpc4	98	92.788	ENSTSYG00000006532	PABPC4	59	92.788	Carlito_syrichta
ENSNBRG00000009708	pabpc4	98	92.788	ENSCAPG00000015984	PABPC4	62	92.788	Cavia_aperea
ENSNBRG00000009708	pabpc4	98	92.788	ENSCPOG00000009552	PABPC4	61	92.788	Cavia_porcellus
ENSNBRG00000009708	pabpc4	98	92.788	ENSCCAG00000037306	PABPC4	60	92.788	Cebus_capucinus
ENSNBRG00000009708	pabpc4	98	92.788	ENSCATG00000042164	PABPC4	59	92.788	Cercocebus_atys
ENSNBRG00000009708	pabpc4	98	92.788	ENSCLAG00000011899	PABPC4	59	92.788	Chinchilla_lanigera
ENSNBRG00000009708	pabpc4	98	92.788	ENSCSAG00000001135	PABPC4	57	92.788	Chlorocebus_sabaeus
ENSNBRG00000009708	pabpc4	98	91.447	ENSCHOG00000005327	PABPC4	54	91.447	Choloepus_hoffmanni
ENSNBRG00000009708	pabpc4	98	97.115	ENSCPBG00000001038	PABPC4	60	97.115	Chrysemys_picta_bellii
ENSNBRG00000009708	pabpc4	98	92.788	ENSCANG00000034177	PABPC4	60	92.788	Colobus_angolensis_palliatus
ENSNBRG00000009708	pabpc4	98	92.308	ENSCGRG00001018166	Pabpc4	61	92.308	Cricetulus_griseus_chok1gshd
ENSNBRG00000009708	pabpc4	98	92.308	ENSCGRG00000009777	Pabpc4	62	92.308	Cricetulus_griseus_crigri
ENSNBRG00000009708	pabpc4	98	98.558	ENSCSEG00000000130	pabpc4	60	98.558	Cynoglossus_semilaevis
ENSNBRG00000009708	pabpc4	98	98.558	ENSCVAG00000019246	pabpc4	61	98.558	Cyprinodon_variegatus
ENSNBRG00000009708	pabpc4	98	97.596	ENSDARG00000059259	pabpc4	62	97.596	Danio_rerio
ENSNBRG00000009708	pabpc4	98	91.781	ENSDNOG00000018444	-	56	91.781	Dasypus_novemcinctus
ENSNBRG00000009708	pabpc4	98	92.788	ENSDORG00000011581	Pabpc4	58	92.788	Dipodomys_ordii
ENSNBRG00000009708	pabpc4	85	49.624	ENSETEG00000009172	-	50	49.624	Echinops_telfairi
ENSNBRG00000009708	pabpc4	98	90.385	ENSEBUG00000013782	pabpc4	63	90.385	Eptatretus_burgeri
ENSNBRG00000009708	pabpc4	98	90.865	ENSEBUG00000000992	pabpc4	63	90.865	Eptatretus_burgeri
ENSNBRG00000009708	pabpc4	98	92.788	ENSEASG00005014119	PABPC4	57	92.788	Equus_asinus_asinus
ENSNBRG00000009708	pabpc4	98	92.788	ENSECAG00000009396	PABPC4	57	92.788	Equus_caballus
ENSNBRG00000009708	pabpc4	98	92.308	ENSEEUG00000002962	PABPC4	57	92.308	Erinaceus_europaeus
ENSNBRG00000009708	pabpc4	98	96.635	ENSELUG00000003195	pabpc4	59	96.635	Esox_lucius
ENSNBRG00000009708	pabpc4	98	92.788	ENSFCAG00000015254	-	59	92.788	Felis_catus
ENSNBRG00000009708	pabpc4	98	97.596	ENSFALG00000000543	PABPC4	60	97.596	Ficedula_albicollis
ENSNBRG00000009708	pabpc4	98	92.788	ENSFDAG00000020016	-	57	92.788	Fukomys_damarensis
ENSNBRG00000009708	pabpc4	98	98.558	ENSFHEG00000007548	pabpc4	63	98.558	Fundulus_heteroclitus
ENSNBRG00000009708	pabpc4	98	95.192	ENSGMOG00000019025	pabpc4	59	95.192	Gadus_morhua
ENSNBRG00000009708	pabpc4	98	97.115	ENSGALG00000003800	PABPC4	60	97.115	Gallus_gallus
ENSNBRG00000009708	pabpc4	98	98.077	ENSGAFG00000018195	pabpc4	95	98.889	Gambusia_affinis
ENSNBRG00000009708	pabpc4	98	97.596	ENSGACG00000007179	pabpc4	60	97.596	Gasterosteus_aculeatus
ENSNBRG00000009708	pabpc4	98	97.115	ENSGAGG00000001888	PABPC4	60	97.115	Gopherus_agassizii
ENSNBRG00000009708	pabpc4	98	92.788	ENSGGOG00000004002	PABPC4	59	92.788	Gorilla_gorilla
ENSNBRG00000009708	pabpc4	98	99.519	ENSHBUG00000020206	pabpc4	60	99.519	Haplochromis_burtoni
ENSNBRG00000009708	pabpc4	98	92.788	ENSHGLG00000011162	PABPC4	59	92.788	Heterocephalus_glaber_female
ENSNBRG00000009708	pabpc4	98	92.788	ENSHGLG00100001580	PABPC4	59	92.788	Heterocephalus_glaber_male
ENSNBRG00000009708	pabpc4	98	98.558	ENSHCOG00000012694	pabpc4	61	98.558	Hippocampus_comes
ENSNBRG00000009708	pabpc4	98	97.596	ENSIPUG00000016620	pabpc4	59	97.596	Ictalurus_punctatus
ENSNBRG00000009708	pabpc4	98	92.788	ENSSTOG00000010416	PABPC4	61	92.788	Ictidomys_tridecemlineatus
ENSNBRG00000009708	pabpc4	98	93.237	ENSJJAG00000007781	Pabpc4	58	93.237	Jaculus_jaculus
ENSNBRG00000009708	pabpc4	98	98.558	ENSKMAG00000013597	pabpc4	62	98.558	Kryptolebias_marmoratus
ENSNBRG00000009708	pabpc4	98	98.077	ENSLBEG00000013654	pabpc4	60	98.077	Labrus_bergylta
ENSNBRG00000009708	pabpc4	98	96.635	ENSLACG00000011907	PABPC4	59	96.635	Latimeria_chalumnae
ENSNBRG00000009708	pabpc4	98	97.115	ENSLOCG00000001877	pabpc4	59	97.115	Lepisosteus_oculatus
ENSNBRG00000009708	pabpc4	98	92.788	ENSLAFG00000000151	PABPC4	61	92.788	Loxodonta_africana
ENSNBRG00000009708	pabpc4	98	92.788	ENSMFAG00000041481	PABPC4	59	92.788	Macaca_fascicularis
ENSNBRG00000009708	pabpc4	98	92.788	ENSMMUG00000007497	PABPC4	57	92.788	Macaca_mulatta
ENSNBRG00000009708	pabpc4	98	92.788	ENSMNEG00000043054	PABPC4	59	92.788	Macaca_nemestrina
ENSNBRG00000009708	pabpc4	98	92.788	ENSMLEG00000040716	PABPC4	59	92.788	Mandrillus_leucophaeus
ENSNBRG00000009708	pabpc4	98	98.558	ENSMAMG00000010025	pabpc4	63	98.558	Mastacembelus_armatus
ENSNBRG00000009708	pabpc4	98	99.519	ENSMZEG00005006141	pabpc4	63	99.519	Maylandia_zebra
ENSNBRG00000009708	pabpc4	98	97.386	ENSMGAG00000005408	PABPC4	55	97.386	Meleagris_gallopavo
ENSNBRG00000009708	pabpc4	99	64.929	ENSMAUG00000019763	-	59	64.929	Mesocricetus_auratus
ENSNBRG00000009708	pabpc4	81	80.117	ENSMAUG00000004089	-	92	80.117	Mesocricetus_auratus
ENSNBRG00000009708	pabpc4	88	34.783	ENSMAUG00000001295	-	64	34.783	Mesocricetus_auratus
ENSNBRG00000009708	pabpc4	97	75.342	ENSMICG00000036729	-	60	75.342	Microcebus_murinus
ENSNBRG00000009708	pabpc4	98	92.788	ENSMICG00000016633	-	69	92.788	Microcebus_murinus
ENSNBRG00000009708	pabpc4	98	92.788	ENSMOCG00000006763	Pabpc4	60	92.788	Microtus_ochrogaster
ENSNBRG00000009708	pabpc4	98	99.038	ENSMMOG00000002363	pabpc4	61	99.038	Mola_mola
ENSNBRG00000009708	pabpc4	98	76.526	ENSMODG00000018051	-	95	76.526	Monodelphis_domestica
ENSNBRG00000009708	pabpc4	98	96.154	ENSMODG00000017657	-	57	96.154	Monodelphis_domestica
ENSNBRG00000009708	pabpc4	98	98.558	ENSMALG00000011017	pabpc4	60	98.558	Monopterus_albus
ENSNBRG00000009708	pabpc4	98	91.346	MGP_CAROLIEiJ_G0026435	-	100	96.454	Mus_caroli
ENSNBRG00000009708	pabpc4	98	89.726	MGP_CAROLIEiJ_G0024864	-	56	89.726	Mus_caroli
ENSNBRG00000009708	pabpc4	97	96.226	ENSMUSG00000011257	Pabpc4	95	96.226	Mus_musculus
ENSNBRG00000009708	pabpc4	98	92.308	MGP_PahariEiJ_G0028765	Pabpc4	100	97.163	Mus_pahari
ENSNBRG00000009708	pabpc4	98	92.308	MGP_SPRETEiJ_G0027415	Pabpc4	100	97.163	Mus_spretus
ENSNBRG00000009708	pabpc4	98	92.788	ENSMPUG00000014414	-	57	92.788	Mustela_putorius_furo
ENSNBRG00000009708	pabpc4	98	92.788	ENSMLUG00000012068	PABPC4	61	92.788	Myotis_lucifugus
ENSNBRG00000009708	pabpc4	98	92.788	ENSNGAG00000018292	Pabpc4	61	92.788	Nannospalax_galili
ENSNBRG00000009708	pabpc4	98	92.788	ENSNLEG00000011928	PABPC4	59	92.788	Nomascus_leucogenys
ENSNBRG00000009708	pabpc4	98	92.308	ENSOPRG00000011984	PABPC4	60	92.308	Ochotona_princeps
ENSNBRG00000009708	pabpc4	66	82.857	ENSODEG00000013457	-	100	82.857	Octodon_degus
ENSNBRG00000009708	pabpc4	97	79.545	ENSODEG00000017434	-	53	37.864	Octodon_degus
ENSNBRG00000009708	pabpc4	98	92.788	ENSODEG00000006592	-	60	92.788	Octodon_degus
ENSNBRG00000009708	pabpc4	98	99.519	ENSONIG00000008176	pabpc4	60	99.519	Oreochromis_niloticus
ENSNBRG00000009708	pabpc4	98	97.115	ENSOANG00000010001	PABPC4	60	97.115	Ornithorhynchus_anatinus
ENSNBRG00000009708	pabpc4	98	92.308	ENSOCUG00000000562	PABPC4	52	92.308	Oryctolagus_cuniculus
ENSNBRG00000009708	pabpc4	98	97.115	ENSORLG00000017479	pabpc4	60	97.115	Oryzias_latipes
ENSNBRG00000009708	pabpc4	98	97.115	ENSORLG00020018644	pabpc4	62	97.115	Oryzias_latipes_hni
ENSNBRG00000009708	pabpc4	98	97.115	ENSORLG00015015042	pabpc4	60	97.115	Oryzias_latipes_hsok
ENSNBRG00000009708	pabpc4	98	97.596	ENSOMEG00000014410	pabpc4	62	97.596	Oryzias_melastigma
ENSNBRG00000009708	pabpc4	98	92.788	ENSOGAG00000004067	PABPC4	58	92.788	Otolemur_garnettii
ENSNBRG00000009708	pabpc4	98	92.788	ENSOARG00000020060	PABPC4	57	92.788	Ovis_aries
ENSNBRG00000009708	pabpc4	98	92.788	ENSPPAG00000043625	PABPC4	59	92.788	Pan_paniscus
ENSNBRG00000009708	pabpc4	98	92.788	ENSPPRG00000024727	PABPC4	59	92.788	Panthera_pardus
ENSNBRG00000009708	pabpc4	98	92.788	ENSPTIG00000005829	PABPC4	59	92.788	Panthera_tigris_altaica
ENSNBRG00000009708	pabpc4	98	92.788	ENSPTRG00000000573	PABPC4	59	92.788	Pan_troglodytes
ENSNBRG00000009708	pabpc4	98	92.788	ENSPANG00000009484	PABPC4	59	92.788	Papio_anubis
ENSNBRG00000009708	pabpc4	98	97.596	ENSPKIG00000025356	pabpc4	61	97.596	Paramormyrops_kingsleyae
ENSNBRG00000009708	pabpc4	98	97.115	ENSPSIG00000016892	PABPC4	60	97.115	Pelodiscus_sinensis
ENSNBRG00000009708	pabpc4	98	98.558	ENSPMGG00000009073	pabpc4	62	98.558	Periophthalmus_magnuspinnatus
ENSNBRG00000009708	pabpc4	98	92.308	ENSPEMG00000023569	-	59	92.308	Peromyscus_maniculatus_bairdii
ENSNBRG00000009708	pabpc4	98	89.423	ENSPEMG00000024193	-	64	89.423	Peromyscus_maniculatus_bairdii
ENSNBRG00000009708	pabpc4	98	89.100	ENSPMAG00000002836	pabpc4	67	89.100	Petromyzon_marinus
ENSNBRG00000009708	pabpc4	98	97.396	ENSPCIG00000020674	PABPC4	69	97.396	Phascolarctos_cinereus
ENSNBRG00000009708	pabpc4	98	98.077	ENSPFOG00000002682	pabpc4	60	98.077	Poecilia_formosa
ENSNBRG00000009708	pabpc4	98	98.077	ENSPLAG00000010112	pabpc4	60	98.077	Poecilia_latipinna
ENSNBRG00000009708	pabpc4	98	98.077	ENSPMEG00000019739	pabpc4	60	98.077	Poecilia_mexicana
ENSNBRG00000009708	pabpc4	98	98.077	ENSPREG00000001589	pabpc4	60	98.077	Poecilia_reticulata
ENSNBRG00000009708	pabpc4	98	92.788	ENSPPYG00000001506	PABPC4	57	92.788	Pongo_abelii
ENSNBRG00000009708	pabpc4	98	92.788	ENSPCOG00000023725	-	59	92.788	Propithecus_coquereli
ENSNBRG00000009708	pabpc4	98	60.959	ENSPCOG00000025882	-	65	53.365	Propithecus_coquereli
ENSNBRG00000009708	pabpc4	98	92.105	ENSPVAG00000002187	PABPC4	54	92.105	Pteropus_vampyrus
ENSNBRG00000009708	pabpc4	98	99.519	ENSPNYG00000006134	pabpc4	60	99.519	Pundamilia_nyererei
ENSNBRG00000009708	pabpc4	98	97.115	ENSPNAG00000024355	pabpc4	59	97.115	Pygocentrus_nattereri
ENSNBRG00000009708	pabpc4	98	88.942	ENSRNOG00000028592	AABR07035074.1	58	88.942	Rattus_norvegicus
ENSNBRG00000009708	pabpc4	98	91.827	ENSRNOG00000015642	Pabpc4	58	91.827	Rattus_norvegicus
ENSNBRG00000009708	pabpc4	98	93.237	ENSRBIG00000039761	PABPC4	63	92.611	Rhinopithecus_bieti
ENSNBRG00000009708	pabpc4	98	92.788	ENSRROG00000033355	PABPC4	59	92.788	Rhinopithecus_roxellana
ENSNBRG00000009708	pabpc4	98	93.237	ENSSBOG00000026193	PABPC4	64	93.237	Saimiri_boliviensis_boliviensis
ENSNBRG00000009708	pabpc4	98	96.635	ENSSHAG00000018139	PABPC4	60	96.635	Sarcophilus_harrisii
ENSNBRG00000009708	pabpc4	98	96.875	ENSSFOG00015023514	pabpc4	59	96.875	Scleropages_formosus
ENSNBRG00000009708	pabpc4	98	98.558	ENSSMAG00000009007	pabpc4	60	98.558	Scophthalmus_maximus
ENSNBRG00000009708	pabpc4	98	98.558	ENSSDUG00000012683	pabpc4	66	98.558	Seriola_dumerili
ENSNBRG00000009708	pabpc4	98	98.558	ENSSLDG00000013025	pabpc4	64	98.558	Seriola_lalandi_dorsalis
ENSNBRG00000009708	pabpc4	98	73.913	ENSSARG00000000310	PABPC4	55	73.913	Sorex_araneus
ENSNBRG00000009708	pabpc4	98	96.635	ENSSPUG00000003204	PABPC4	60	96.635	Sphenodon_punctatus
ENSNBRG00000009708	pabpc4	98	98.558	ENSSPAG00000009252	pabpc4	66	98.558	Stegastes_partitus
ENSNBRG00000009708	pabpc4	98	92.788	ENSSSCG00000003660	-	59	92.788	Sus_scrofa
ENSNBRG00000009708	pabpc4	98	97.596	ENSTGUG00000001266	PABPC4	57	97.596	Taeniopygia_guttata
ENSNBRG00000009708	pabpc4	98	99.038	ENSTRUG00000005907	pabpc4	60	99.038	Takifugu_rubripes
ENSNBRG00000009708	pabpc4	98	98.558	ENSTNIG00000016902	pabpc4	61	98.558	Tetraodon_nigroviridis
ENSNBRG00000009708	pabpc4	97	73.684	ENSTBEG00000009035	PABPC4	60	73.684	Tupaia_belangeri
ENSNBRG00000009708	pabpc4	96	56.808	ENSTTRG00000014340	PABPC4	57	56.808	Tursiops_truncatus
ENSNBRG00000009708	pabpc4	98	92.788	ENSUAMG00000000303	PABPC4	59	92.788	Ursus_americanus
ENSNBRG00000009708	pabpc4	98	92.788	ENSUMAG00000019585	PABPC4	70	92.788	Ursus_maritimus
ENSNBRG00000009708	pabpc4	98	60.096	ENSVPAG00000010041	PABPC4	50	60.096	Vicugna_pacos
ENSNBRG00000009708	pabpc4	98	92.788	ENSVVUG00000005215	PABPC4	59	92.788	Vulpes_vulpes
ENSNBRG00000009708	pabpc4	98	88.942	ENSXETG00000010946	pabpc4	60	88.942	Xenopus_tropicalis
ENSNBRG00000009708	pabpc4	97	98.113	ENSXETG00000027221	-	95	98.113	Xenopus_tropicalis
ENSNBRG00000009708	pabpc4	98	96.732	ENSXCOG00000013190	pabpc4	96	93.333	Xiphophorus_couchianus
ENSNBRG00000009708	pabpc4	98	98.077	ENSXMAG00000019007	pabpc4	60	98.077	Xiphophorus_maculatus