EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000010139 (Gene tree)
Gene ID: 102783423
Gene Symbol: raver1
Alias: zgc:112236
Full Name: ribonucleoprotein PTB-binding 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 9693 bases
Position: chrJH422328.1:581467-591159
Accession: 102783423
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000013065	RRM_1	PF00076.22	3.5e-23	1	2
ENSNBRP00000013065	RRM_1	PF00076.22	3.5e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000013434	-	2109	XM_006798327	ENSNBRP00000013065	702 (aa)	XP_006798390	-

Gene Model

Click here to download ENSNBRG00000010139's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000010139's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000010139	raver1	78	55.556	ENSG00000161847	RAVER1	96	44.766	Homo_sapiens
ENSNBRG00000010139	raver1	98	77.994	ENSAPOG00000017267	raver1	92	78.356	Acanthochromis_polyacanthus
ENSNBRG00000010139	raver1	78	55.556	ENSAMEG00000011738	RAVER1	75	63.750	Ailuropoda_melanoleuca
ENSNBRG00000010139	raver1	98	79.498	ENSAOCG00000005128	raver1	97	80.110	Amphiprion_ocellaris
ENSNBRG00000010139	raver1	98	79.501	ENSAPEG00000010854	raver1	99	84.000	Amphiprion_percula
ENSNBRG00000010139	raver1	98	76.495	ENSATEG00000021004	raver1	100	75.479	Anabas_testudineus
ENSNBRG00000010139	raver1	63	48.600	ENSACAG00000008386	-	74	46.979	Anolis_carolinensis
ENSNBRG00000010139	raver1	80	53.535	ENSANAG00000028226	RAVER1	78	61.250	Aotus_nancymaae
ENSNBRG00000010139	raver1	100	89.178	ENSACLG00000018492	raver1	100	85.165	Astatotilapia_calliptera
ENSNBRG00000010139	raver1	97	60.218	ENSAMXG00000005132	raver1	100	59.574	Astyanax_mexicanus
ENSNBRG00000010139	raver1	79	82.692	ENSBTAG00000015721	RAVER1	91	61.728	Bos_taurus
ENSNBRG00000010139	raver1	65	52.449	ENSCJAG00000005671	RAVER1	64	50.920	Callithrix_jacchus
ENSNBRG00000010139	raver1	91	46.379	ENSCAFG00000017861	RAVER1	94	46.362	Canis_familiaris
ENSNBRG00000010139	raver1	91	46.379	ENSCAFG00020024449	RAVER1	96	46.362	Canis_lupus_dingo
ENSNBRG00000010139	raver1	65	51.111	ENSCHIG00000006718	RAVER1	73	52.834	Capra_hircus
ENSNBRG00000010139	raver1	67	82.692	ENSCAPG00000002269	RAVER1	79	61.250	Cavia_aperea
ENSNBRG00000010139	raver1	72	82.692	ENSCPOG00000001008	RAVER1	78	61.250	Cavia_porcellus
ENSNBRG00000010139	raver1	65	52.653	ENSCCAG00000031723	RAVER1	65	50.511	Cebus_capucinus
ENSNBRG00000010139	raver1	65	52.245	ENSCATG00000043863	RAVER1	65	50.716	Cercocebus_atys
ENSNBRG00000010139	raver1	91	45.667	ENSCLAG00000009336	RAVER1	76	63.750	Chinchilla_lanigera
ENSNBRG00000010139	raver1	65	52.245	ENSCSAG00000007317	RAVER1	55	50.716	Chlorocebus_sabaeus
ENSNBRG00000010139	raver1	91	46.400	ENSCPBG00000005349	-	96	45.906	Chrysemys_picta_bellii
ENSNBRG00000010139	raver1	65	52.245	ENSCANG00000008337	RAVER1	65	50.716	Colobus_angolensis_palliatus
ENSNBRG00000010139	raver1	78	58.586	ENSCGRG00001013260	-	78	65.000	Cricetulus_griseus_chok1gshd
ENSNBRG00000010139	raver1	78	58.586	ENSCGRG00000015138	-	78	65.000	Cricetulus_griseus_crigri
ENSNBRG00000010139	raver1	98	67.490	ENSCSEG00000021092	raver1	100	68.016	Cynoglossus_semilaevis
ENSNBRG00000010139	raver1	100	70.628	ENSCVAG00000013971	raver1	100	71.175	Cyprinodon_variegatus
ENSNBRG00000010139	raver1	98	62.121	ENSDARG00000052617	raver1	89	77.163	Danio_rerio
ENSNBRG00000010139	raver1	54	54.082	ENSDNOG00000035742	-	56	61.250	Dasypus_novemcinctus
ENSNBRG00000010139	raver1	65	48.941	ENSDORG00000010106	-	97	41.901	Dipodomys_ordii
ENSNBRG00000010139	raver1	78	54.545	ENSECAG00000024966	RAVER1	75	62.500	Equus_caballus
ENSNBRG00000010139	raver1	100	66.984	ENSELUG00000023287	raver1	100	66.259	Esox_lucius
ENSNBRG00000010139	raver1	65	49.505	ENSFCAG00000009435	RAVER1	65	55.668	Felis_catus
ENSNBRG00000010139	raver1	90	45.368	ENSFDAG00000015113	RAVER1	97	45.306	Fukomys_damarensis
ENSNBRG00000010139	raver1	93	63.068	ENSGMOG00000003649	raver1	98	62.589	Gadus_morhua
ENSNBRG00000010139	raver1	65	35.152	ENSGALG00000050608	-	51	34.263	Gallus_gallus
ENSNBRG00000010139	raver1	100	70.828	ENSGAFG00000015944	raver1	100	71.370	Gambusia_affinis
ENSNBRG00000010139	raver1	94	65.306	ENSGACG00000013818	raver1	100	65.986	Gasterosteus_aculeatus
ENSNBRG00000010139	raver1	91	48.133	ENSGAGG00000011748	-	96	57.803	Gopherus_agassizii
ENSNBRG00000010139	raver1	78	54.545	ENSGGOG00000006015	RAVER1	94	44.766	Gorilla_gorilla
ENSNBRG00000010139	raver1	99	88.966	ENSHBUG00000021210	raver1	100	85.302	Haplochromis_burtoni
ENSNBRG00000010139	raver1	90	44.959	ENSHGLG00000015460	RAVER1	78	63.750	Heterocephalus_glaber_female
ENSNBRG00000010139	raver1	90	44.959	ENSHGLG00100000812	RAVER1	78	63.750	Heterocephalus_glaber_male
ENSNBRG00000010139	raver1	100	67.439	ENSHCOG00000000449	raver1	98	67.439	Hippocampus_comes
ENSNBRG00000010139	raver1	98	61.728	ENSIPUG00000013153	raver1	100	61.808	Ictalurus_punctatus
ENSNBRG00000010139	raver1	65	51.509	ENSSTOG00000003241	RAVER1	96	45.267	Ictidomys_tridecemlineatus
ENSNBRG00000010139	raver1	91	45.957	ENSJJAG00000018219	-	77	63.750	Jaculus_jaculus
ENSNBRG00000010139	raver1	100	75.238	ENSKMAG00000017355	raver1	100	74.286	Kryptolebias_marmoratus
ENSNBRG00000010139	raver1	92	74.041	ENSLBEG00000008268	raver1	96	74.041	Labrus_bergylta
ENSNBRG00000010139	raver1	85	43.989	ENSLACG00000005809	-	80	62.500	Latimeria_chalumnae
ENSNBRG00000010139	raver1	98	55.212	ENSLOCG00000007500	raver1	100	54.777	Lepisosteus_oculatus
ENSNBRG00000010139	raver1	93	44.828	ENSLAFG00000003664	-	79	63.750	Loxodonta_africana
ENSNBRG00000010139	raver1	65	52.245	ENSMFAG00000037977	RAVER1	94	45.041	Macaca_fascicularis
ENSNBRG00000010139	raver1	65	52.245	ENSMMUG00000014897	RAVER1	65	52.897	Macaca_mulatta
ENSNBRG00000010139	raver1	65	52.245	ENSMNEG00000028390	RAVER1	65	50.716	Macaca_nemestrina
ENSNBRG00000010139	raver1	65	52.449	ENSMLEG00000041959	RAVER1	65	50.920	Mandrillus_leucophaeus
ENSNBRG00000010139	raver1	98	75.657	ENSMAMG00000012059	raver1	100	74.659	Mastacembelus_armatus
ENSNBRG00000010139	raver1	100	88.767	ENSMZEG00005019002	raver1	100	89.452	Maylandia_zebra
ENSNBRG00000010139	raver1	78	58.586	ENSMAUG00000017948	-	78	65.000	Mesocricetus_auratus
ENSNBRG00000010139	raver1	91	46.535	ENSMICG00000010326	RAVER1	96	46.802	Microcebus_murinus
ENSNBRG00000010139	raver1	78	58.586	ENSMOCG00000015553	-	77	65.000	Microtus_ochrogaster
ENSNBRG00000010139	raver1	98	75.934	ENSMMOG00000012093	raver1	100	74.251	Mola_mola
ENSNBRG00000010139	raver1	87	45.601	ENSMODG00000005584	-	85	45.030	Monodelphis_domestica
ENSNBRG00000010139	raver1	100	72.789	ENSMALG00000016569	raver1	100	73.333	Monopterus_albus
ENSNBRG00000010139	raver1	79	59.596	MGP_CAROLIEiJ_G0031860	-	78	66.250	Mus_caroli
ENSNBRG00000010139	raver1	65	49.503	ENSMUSG00000010205	Raver1	68	47.860	Mus_musculus
ENSNBRG00000010139	raver1	78	58.586	MGP_PahariEiJ_G0014726	-	78	65.000	Mus_pahari
ENSNBRG00000010139	raver1	65	49.304	MGP_SPRETEiJ_G0032984	-	68	47.665	Mus_spretus
ENSNBRG00000010139	raver1	77	55.556	ENSMPUG00000006712	RAVER1	75	63.750	Mustela_putorius_furo
ENSNBRG00000010139	raver1	91	46.045	ENSMLUG00000012328	RAVER1	96	47.159	Myotis_lucifugus
ENSNBRG00000010139	raver1	78	57.576	ENSNGAG00000001260	-	96	44.202	Nannospalax_galili
ENSNBRG00000010139	raver1	65	52.041	ENSNLEG00000012181	RAVER1	65	50.511	Nomascus_leucogenys
ENSNBRG00000010139	raver1	85	45.534	ENSMEUG00000003281	-	80	63.750	Notamacropus_eugenii
ENSNBRG00000010139	raver1	61	82.692	ENSODEG00000016260	RAVER1	76	78.947	Octodon_degus
ENSNBRG00000010139	raver1	92	85.377	ENSONIG00000001559	raver1	96	96.959	Oreochromis_niloticus
ENSNBRG00000010139	raver1	65	52.156	ENSOCUG00000020918	RAVER1	66	50.412	Oryctolagus_cuniculus
ENSNBRG00000010139	raver1	100	70.981	ENSORLG00000005458	raver1	100	71.526	Oryzias_latipes
ENSNBRG00000010139	raver1	100	70.708	ENSORLG00020004392	raver1	100	71.526	Oryzias_latipes_hni
ENSNBRG00000010139	raver1	100	71.253	ENSORLG00015017222	raver1	100	71.798	Oryzias_latipes_hsok
ENSNBRG00000010139	raver1	93	72.052	ENSOMEG00000023956	raver1	100	91.837	Oryzias_melastigma
ENSNBRG00000010139	raver1	91	46.453	ENSOGAG00000011071	RAVER1	65	50.509	Otolemur_garnettii
ENSNBRG00000010139	raver1	65	48.485	ENSOARG00000015886	RAVER1	64	48.466	Ovis_aries
ENSNBRG00000010139	raver1	78	55.556	ENSPPAG00000002611	RAVER1	94	44.904	Pan_paniscus
ENSNBRG00000010139	raver1	65	51.111	ENSPPRG00000009912	RAVER1	65	55.668	Panthera_pardus
ENSNBRG00000010139	raver1	78	55.556	ENSPTRG00000010466	RAVER1	94	44.904	Pan_troglodytes
ENSNBRG00000010139	raver1	65	52.245	ENSPANG00000004122	RAVER1	65	50.716	Papio_anubis
ENSNBRG00000010139	raver1	78	58.586	ENSPEMG00000016411	-	78	65.000	Peromyscus_maniculatus_bairdii
ENSNBRG00000010139	raver1	91	48.336	ENSPCIG00000018695	-	96	47.445	Phascolarctos_cinereus
ENSNBRG00000010139	raver1	100	70.612	ENSPFOG00000007016	raver1	100	70.053	Poecilia_formosa
ENSNBRG00000010139	raver1	95	69.658	ENSPLAG00000020793	raver1	99	70.085	Poecilia_latipinna
ENSNBRG00000010139	raver1	100	71.913	ENSPMEG00000011220	raver1	100	72.320	Poecilia_mexicana
ENSNBRG00000010139	raver1	100	68.342	ENSPREG00000006864	raver1	100	65.489	Poecilia_reticulata
ENSNBRG00000010139	raver1	65	52.041	ENSPPYG00000010514	RAVER1	80	45.049	Pongo_abelii
ENSNBRG00000010139	raver1	78	54.545	ENSPCOG00000026605	RAVER1	75	62.500	Propithecus_coquereli
ENSNBRG00000010139	raver1	72	82.692	ENSPVAG00000003689	RAVER1	74	78.947	Pteropus_vampyrus
ENSNBRG00000010139	raver1	100	84.478	ENSPNYG00000013284	raver1	100	84.753	Pundamilia_nyererei
ENSNBRG00000010139	raver1	98	65.021	ENSPNAG00000015476	raver1	100	63.833	Pygocentrus_nattereri
ENSNBRG00000010139	raver1	65	50.099	ENSRNOG00000020710	Raver1	68	49.035	Rattus_norvegicus
ENSNBRG00000010139	raver1	91	46.893	ENSRBIG00000034702	RAVER1	70	87.500	Rhinopithecus_bieti
ENSNBRG00000010139	raver1	91	47.125	ENSRROG00000031186	RAVER1	94	46.705	Rhinopithecus_roxellana
ENSNBRG00000010139	raver1	91	47.125	ENSSBOG00000023423	RAVER1	94	46.848	Saimiri_boliviensis_boliviensis
ENSNBRG00000010139	raver1	85	47.352	ENSSHAG00000008181	-	90	46.812	Sarcophilus_harrisii
ENSNBRG00000010139	raver1	98	76.552	ENSSMAG00000004546	raver1	100	75.679	Scophthalmus_maximus
ENSNBRG00000010139	raver1	98	78.008	ENSSDUG00000021063	raver1	100	78.610	Seriola_dumerili
ENSNBRG00000010139	raver1	98	78.008	ENSSLDG00000014505	raver1	100	78.610	Seriola_lalandi_dorsalis
ENSNBRG00000010139	raver1	98	79.530	ENSSPAG00000000688	raver1	100	80.245	Stegastes_partitus
ENSNBRG00000010139	raver1	73	78.947	ENSSSCG00000013650	-	79	78.947	Sus_scrofa
ENSNBRG00000010139	raver1	98	72.414	ENSTRUG00000025641	raver1	100	70.788	Takifugu_rubripes
ENSNBRG00000010139	raver1	65	57.035	ENSTTRG00000009552	RAVER1	77	63.750	Tursiops_truncatus
ENSNBRG00000010139	raver1	78	55.556	ENSUAMG00000020385	RAVER1	75	63.750	Ursus_americanus
ENSNBRG00000010139	raver1	91	46.379	ENSVVUG00000028976	RAVER1	94	46.362	Vulpes_vulpes
ENSNBRG00000010139	raver1	100	46.003	ENSXETG00000011622	raver1	100	45.563	Xenopus_tropicalis
ENSNBRG00000010139	raver1	100	72.049	ENSXCOG00000016368	raver1	100	72.592	Xiphophorus_couchianus
ENSNBRG00000010139	raver1	100	72.049	ENSXMAG00000000217	raver1	100	72.592	Xiphophorus_maculatus