EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNBRG00000010525 (Gene tree)
Gene ID
102780576
Gene Symbol
CPSF3 (1 of many)
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specificity factor subunit 3-like
Gene Type
protein_coding
Species
Neolamprologus_brichardi
Status
putative
Strand
Minus strand
Length
22679 bases
Position
chrJH422282.1:11273096-11295774
Accession
102780576
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNBRP00000013619CPSF73-100_CPF11718.82e-5311
ENSNBRP00000013619Beta-CaspPF10996.86.4e-3411
ENSNBRP00000013619Lactamase_BPF00753.273.4e-0811
ENSNBRP00000013619RMMBLPF07521.124.2e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNBRT00000013994CPSF3 (1 of many)-2011914XM_006786231ENSNBRP00000013619637 (aa)XP_006786294-
Gene Model
Click here to download ENSNBRG00000010525's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000010525's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNBRG00000010525CPSF36534.118ENSNBRG00000002564ints116834.118
ENSNBRG00000010525CPSF39986.010ENSNBRG00000004770cpsf39985.984
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNBRG00000010525CPSF39986.349ENSG00000119203CPSF39786.349Homo_sapiens
ENSNBRG00000010525CPSF37197.118ENSAPOG00000012241CPSF38897.327Acanthochromis_polyacanthus
ENSNBRG00000010525CPSF39986.328ENSAPOG00000022087cpsf39986.258Acanthochromis_polyacanthus
ENSNBRG00000010525CPSF39986.508ENSAMEG00000008493CPSF39286.508Ailuropoda_melanoleuca
ENSNBRG00000010525CPSF310098.901ENSACIG00000023663CPSF310098.901Amphilophus_citrinellus
ENSNBRG00000010525CPSF39985.692ENSACIG00000009846cpsf39985.692Amphilophus_citrinellus
ENSNBRG00000010525CPSF39986.169ENSAOCG00000022056cpsf39186.169Amphiprion_ocellaris
ENSNBRG00000010525CPSF310093.407ENSAOCG00000010077CPSF39896.355Amphiprion_ocellaris
ENSNBRG00000010525CPSF310093.093ENSAPEG00000021167CPSF39896.355Amphiprion_percula
ENSNBRG00000010525CPSF39986.328ENSAPEG00000019526cpsf39986.142Amphiprion_percula
ENSNBRG00000010525CPSF39986.804ENSATEG00000003959cpsf39986.457Anabas_testudineus
ENSNBRG00000010525CPSF310081.910ENSATEG00000014525CPSF39788.114Anabas_testudineus
ENSNBRG00000010525CPSF39986.508ENSAPLG00000006941CPSF39286.508Anas_platyrhynchos
ENSNBRG00000010525CPSF39984.786ENSACAG00000001759CPSF39984.786Anolis_carolinensis
ENSNBRG00000010525CPSF39980.794ENSANAG00000031254CPSF39380.794Aotus_nancymaae
ENSNBRG00000010525CPSF39986.614ENSACLG00000014484cpsf39986.614Astatotilapia_calliptera
ENSNBRG00000010525CPSF3100100.000ENSACLG00000018846CPSF3100100.000Astatotilapia_calliptera
ENSNBRG00000010525CPSF310087.127ENSAMXG00000004786cpsf310087.127Astyanax_mexicanus
ENSNBRG00000010525CPSF39986.667ENSBTAG00000019735CPSF39286.667Bos_taurus
ENSNBRG00000010525CPSF38956.822WBGene00013460cpsf-38156.822Caenorhabditis_elegans
ENSNBRG00000010525CPSF39986.032ENSCJAG00000006276CPSF39286.032Callithrix_jacchus
ENSNBRG00000010525CPSF39986.508ENSCAFG00000003375CPSF38886.508Canis_familiaris
ENSNBRG00000010525CPSF38989.223ENSCAFG00020026799CPSF39189.223Canis_lupus_dingo
ENSNBRG00000010525CPSF39986.667ENSCHIG00000013973CPSF39286.667Capra_hircus
ENSNBRG00000010525CPSF39986.349ENSTSYG00000002967CPSF39286.349Carlito_syrichta
ENSNBRG00000010525CPSF39986.667ENSCAPG00000013851CPSF39486.667Cavia_aperea
ENSNBRG00000010525CPSF39986.667ENSCPOG00000011299CPSF39286.667Cavia_porcellus
ENSNBRG00000010525CPSF39986.190ENSCCAG00000036730CPSF39386.190Cebus_capucinus
ENSNBRG00000010525CPSF39983.994ENSCATG00000014770CPSF39091.856Cercocebus_atys
ENSNBRG00000010525CPSF39986.349ENSCLAG00000002727CPSF39286.349Chinchilla_lanigera
ENSNBRG00000010525CPSF39977.778ENSCSAG00000007125CPSF39177.778Chlorocebus_sabaeus
ENSNBRG00000010525CPSF38963.269ENSCHOG00000000180CPSF38563.269Choloepus_hoffmanni
ENSNBRG00000010525CPSF39986.508ENSCPBG00000014074CPSF39186.508Chrysemys_picta_bellii
ENSNBRG00000010525CPSF39867.732ENSCING00000007214-8967.732Ciona_intestinalis
ENSNBRG00000010525CPSF39975.873ENSCANG00000034435CPSF39175.873Colobus_angolensis_palliatus
ENSNBRG00000010525CPSF39986.190ENSCGRG00001013134Cpsf39286.190Cricetulus_griseus_chok1gshd
ENSNBRG00000010525CPSF39986.190ENSCGRG00000018319Cpsf39286.190Cricetulus_griseus_crigri
ENSNBRG00000010525CPSF39991.772ENSCSEG00000002021CPSF39891.772Cynoglossus_semilaevis
ENSNBRG00000010525CPSF310087.554ENSCVAG00000015067CPSF39894.295Cyprinodon_variegatus
ENSNBRG00000010525CPSF35073.585ENSCVAG00000022039-9473.585Cyprinodon_variegatus
ENSNBRG00000010525CPSF310081.621ENSDARG00000027649cpsf39187.956Danio_rerio
ENSNBRG00000010525CPSF39985.578ENSDNOG00000008940CPSF38885.578Dasypus_novemcinctus
ENSNBRG00000010525CPSF39487.291ENSDORG00000014263Cpsf39287.291Dipodomys_ordii
ENSNBRG00000010525CPSF39864.058FBgn0261065Cpsf739064.058Drosophila_melanogaster
ENSNBRG00000010525CPSF39477.759ENSETEG00000003893CPSF39277.759Echinops_telfairi
ENSNBRG00000010525CPSF39974.730ENSEBUG00000009018cpsf39175.193Eptatretus_burgeri
ENSNBRG00000010525CPSF39986.508ENSEASG00005003970CPSF39286.508Equus_asinus_asinus
ENSNBRG00000010525CPSF39986.508ENSECAG00000019911CPSF38891.193Equus_caballus
ENSNBRG00000010525CPSF39865.932ENSEEUG00000015422CPSF39270.000Erinaceus_europaeus
ENSNBRG00000010525CPSF39990.079ENSELUG00000013775cpsf39990.079Esox_lucius
ENSNBRG00000010525CPSF39986.667ENSFCAG00000007852CPSF39786.667Felis_catus
ENSNBRG00000010525CPSF39986.349ENSFALG00000006572CPSF39786.349Ficedula_albicollis
ENSNBRG00000010525CPSF39986.010ENSFDAG00000006317CPSF39186.010Fukomys_damarensis
ENSNBRG00000010525CPSF36478.780ENSFHEG00000012186CPSF310078.780Fundulus_heteroclitus
ENSNBRG00000010525CPSF39984.420ENSFHEG00000014774cpsf39184.420Fundulus_heteroclitus
ENSNBRG00000010525CPSF39987.005ENSGMOG00000003157cpsf39187.005Gadus_morhua
ENSNBRG00000010525CPSF39985.714ENSGALG00000016424CPSF39985.714Gallus_gallus
ENSNBRG00000010525CPSF310087.265ENSGAFG00000008016CPSF39194.295Gambusia_affinis
ENSNBRG00000010525CPSF310085.557ENSGAFG00000019449cpsf310085.557Gambusia_affinis
ENSNBRG00000010525CPSF37384.154ENSGAGG00000025583CPSF39384.154Gopherus_agassizii
ENSNBRG00000010525CPSF39986.349ENSGGOG00000001757CPSF39986.349Gorilla_gorilla
ENSNBRG00000010525CPSF36494.828ENSHBUG00000014332CPSF310094.828Haplochromis_burtoni
ENSNBRG00000010525CPSF39986.614ENSHBUG00000001188cpsf39986.614Haplochromis_burtoni
ENSNBRG00000010525CPSF39985.851ENSHGLG00000000666CPSF39185.851Heterocephalus_glaber_female
ENSNBRG00000010525CPSF39985.851ENSHGLG00100007765CPSF39185.851Heterocephalus_glaber_male
ENSNBRG00000010525CPSF39985.797ENSHCOG00000015957CPSF39092.381Hippocampus_comes
ENSNBRG00000010525CPSF39978.841ENSHCOG00000007251cpsf39184.762Hippocampus_comes
ENSNBRG00000010525CPSF310085.449ENSIPUG00000023488cpsf310086.656Ictalurus_punctatus
ENSNBRG00000010525CPSF39986.508ENSSTOG00000004476CPSF39286.508Ictidomys_tridecemlineatus
ENSNBRG00000010525CPSF39985.714ENSJJAG00000023415Cpsf39285.714Jaculus_jaculus
ENSNBRG00000010525CPSF39978.665ENSKMAG00000002806cpsf39184.738Kryptolebias_marmoratus
ENSNBRG00000010525CPSF310088.423ENSKMAG00000007317CPSF39895.246Kryptolebias_marmoratus
ENSNBRG00000010525CPSF39979.524ENSLBEG00000020569cpsf38679.524Labrus_bergylta
ENSNBRG00000010525CPSF35982.306ENSLBEG00000015018-9982.306Labrus_bergylta
ENSNBRG00000010525CPSF39587.994ENSLBEG00000013492CPSF39095.151Labrus_bergylta
ENSNBRG00000010525CPSF39978.447ENSLACG00000008308CPSF39178.447Latimeria_chalumnae
ENSNBRG00000010525CPSF310081.962ENSLOCG00000016823cpsf39188.310Lepisosteus_oculatus
ENSNBRG00000010525CPSF39986.508ENSLAFG00000009467CPSF39286.508Loxodonta_africana
ENSNBRG00000010525CPSF39986.190ENSMFAG00000001339CPSF39786.190Macaca_fascicularis
ENSNBRG00000010525CPSF39986.190ENSMMUG00000018038CPSF39786.190Macaca_mulatta
ENSNBRG00000010525CPSF39993.500ENSMNEG00000039447CPSF39993.500Macaca_nemestrina
ENSNBRG00000010525CPSF39986.349ENSMLEG00000026825CPSF39286.349Mandrillus_leucophaeus
ENSNBRG00000010525CPSF310095.775ENSMAMG00000008835CPSF310095.775Mastacembelus_armatus
ENSNBRG00000010525CPSF39986.486ENSMAMG00000003076cpsf39983.622Mastacembelus_armatus
ENSNBRG00000010525CPSF39986.614ENSMZEG00005014358cpsf39986.614Maylandia_zebra
ENSNBRG00000010525CPSF3100100.000ENSMZEG00005006258CPSF3100100.000Maylandia_zebra
ENSNBRG00000010525CPSF39985.714ENSMGAG00000013995CPSF39485.714Meleagris_gallopavo
ENSNBRG00000010525CPSF35979.467ENSMAUG00000000166Cpsf39979.467Mesocricetus_auratus
ENSNBRG00000010525CPSF39981.111ENSMICG00000002363CPSF39881.111Microcebus_murinus
ENSNBRG00000010525CPSF39983.016ENSMOCG00000020067Cpsf39183.016Microtus_ochrogaster
ENSNBRG00000010525CPSF37981.206ENSMMOG00000011923CPSF38581.206Mola_mola
ENSNBRG00000010525CPSF39982.512ENSMMOG00000018212CPSF39582.512Mola_mola
ENSNBRG00000010525CPSF39985.086ENSMODG00000014703CPSF39285.086Monodelphis_domestica
ENSNBRG00000010525CPSF39987.122ENSMALG00000016416cpsf39986.299Monopterus_albus
ENSNBRG00000010525CPSF39692.508ENSMALG00000011474CPSF39692.508Monopterus_albus
ENSNBRG00000010525CPSF39985.873MGP_CAROLIEiJ_G0017640Cpsf39285.873Mus_caroli
ENSNBRG00000010525CPSF39985.873ENSMUSG00000054309Cpsf39194.144Mus_musculus
ENSNBRG00000010525CPSF39985.714MGP_PahariEiJ_G0029397Cpsf39285.714Mus_pahari
ENSNBRG00000010525CPSF39985.873MGP_SPRETEiJ_G0018481Cpsf39285.873Mus_spretus
ENSNBRG00000010525CPSF39986.486ENSMPUG00000013213CPSF39286.486Mustela_putorius_furo
ENSNBRG00000010525CPSF39986.371ENSMLUG00000010636CPSF39286.371Myotis_lucifugus
ENSNBRG00000010525CPSF39986.190ENSNGAG00000019836Cpsf39286.190Nannospalax_galili
ENSNBRG00000010525CPSF39986.190ENSNLEG00000013359CPSF39786.190Nomascus_leucogenys
ENSNBRG00000010525CPSF39956.190ENSMEUG00000013117-9256.190Notamacropus_eugenii
ENSNBRG00000010525CPSF39976.948ENSOPRG00000008902CPSF39276.948Ochotona_princeps
ENSNBRG00000010525CPSF39986.349ENSODEG00000003129CPSF39286.349Octodon_degus
ENSNBRG00000010525CPSF39986.963ENSONIG00000018812cpsf39186.963Oreochromis_niloticus
ENSNBRG00000010525CPSF38886.501ENSOANG00000008577CPSF39986.501Ornithorhynchus_anatinus
ENSNBRG00000010525CPSF39986.190ENSOCUG00000003728CPSF39286.190Oryctolagus_cuniculus
ENSNBRG00000010525CPSF39984.897ENSORLG00000018854cpsf39184.897Oryzias_latipes
ENSNBRG00000010525CPSF39984.738ENSORLG00020013331cpsf39983.937Oryzias_latipes_hni
ENSNBRG00000010525CPSF39984.897ENSORLG00015011017cpsf39984.409Oryzias_latipes_hsok
ENSNBRG00000010525CPSF39985.215ENSOMEG00000010647cpsf38785.215Oryzias_melastigma
ENSNBRG00000010525CPSF39975.556ENSOGAG00000001680CPSF39275.556Otolemur_garnettii
ENSNBRG00000010525CPSF39986.667ENSOARG00000015073CPSF39286.667Ovis_aries
ENSNBRG00000010525CPSF39986.349ENSPPAG00000042457CPSF39286.349Pan_paniscus
ENSNBRG00000010525CPSF39986.667ENSPPRG00000016790CPSF39786.667Panthera_pardus
ENSNBRG00000010525CPSF39986.667ENSPTIG00000003920CPSF39986.667Panthera_tigris_altaica
ENSNBRG00000010525CPSF39986.349ENSPTRG00000011638CPSF39286.349Pan_troglodytes
ENSNBRG00000010525CPSF39986.349ENSPANG00000016798CPSF39286.349Papio_anubis
ENSNBRG00000010525CPSF310089.953ENSPKIG00000023646cpsf310089.953Paramormyrops_kingsleyae
ENSNBRG00000010525CPSF39986.349ENSPSIG00000016144CPSF39286.349Pelodiscus_sinensis
ENSNBRG00000010525CPSF38791.187ENSPMGG00000006141-9691.187Periophthalmus_magnuspinnatus
ENSNBRG00000010525CPSF36489.655ENSPMGG00000015311CPSF310089.655Periophthalmus_magnuspinnatus
ENSNBRG00000010525CPSF39986.508ENSPEMG00000017668Cpsf39286.508Peromyscus_maniculatus_bairdii
ENSNBRG00000010525CPSF37688.041ENSPMAG00000004841cpsf38988.041Petromyzon_marinus
ENSNBRG00000010525CPSF39986.349ENSPCIG00000009823CPSF39386.349Phascolarctos_cinereus
ENSNBRG00000010525CPSF39984.469ENSPFOG00000015922cpsf39184.469Poecilia_formosa
ENSNBRG00000010525CPSF310086.541ENSPFOG00000010418-9193.661Poecilia_formosa
ENSNBRG00000010525CPSF39984.469ENSPLAG00000000882cpsf39184.469Poecilia_latipinna
ENSNBRG00000010525CPSF36492.611ENSPLAG00000021300-10092.611Poecilia_latipinna
ENSNBRG00000010525CPSF39984.628ENSPMEG00000018309cpsf39184.628Poecilia_mexicana
ENSNBRG00000010525CPSF310079.450ENSPREG00000004482CPSF39185.737Poecilia_reticulata
ENSNBRG00000010525CPSF310085.400ENSPREG00000014875cpsf310085.400Poecilia_reticulata
ENSNBRG00000010525CPSF39981.746ENSPPYG00000012666CPSF39181.746Pongo_abelii
ENSNBRG00000010525CPSF39457.358ENSPCAG00000015042CPSF39157.358Procavia_capensis
ENSNBRG00000010525CPSF38684.716ENSPCOG00000023016CPSF38884.716Propithecus_coquereli
ENSNBRG00000010525CPSF39986.328ENSPVAG00000005324CPSF39286.328Pteropus_vampyrus
ENSNBRG00000010525CPSF39986.614ENSPNYG00000004405cpsf39986.614Pundamilia_nyererei
ENSNBRG00000010525CPSF38699.818ENSPNYG00000021047CPSF39299.818Pundamilia_nyererei
ENSNBRG00000010525CPSF310088.383ENSPNAG00000023060cpsf310088.383Pygocentrus_nattereri
ENSNBRG00000010525CPSF39985.578ENSRNOG00000052418Cpsf39285.578Rattus_norvegicus
ENSNBRG00000010525CPSF39982.857ENSRBIG00000041615CPSF39782.857Rhinopithecus_bieti
ENSNBRG00000010525CPSF39986.349ENSRROG00000033792CPSF39286.349Rhinopithecus_roxellana
ENSNBRG00000010525CPSF38342.157YLR277CYSH17842.157Saccharomyces_cerevisiae
ENSNBRG00000010525CPSF39982.650ENSSBOG00000027263CPSF39282.650Saimiri_boliviensis_boliviensis
ENSNBRG00000010525CPSF39986.190ENSSHAG00000007024CPSF39286.190Sarcophilus_harrisii
ENSNBRG00000010525CPSF310089.482ENSSFOG00015002108cpsf310089.482Scleropages_formosus
ENSNBRG00000010525CPSF39585.106ENSSMAG00000020534CPSF39491.973Scophthalmus_maximus
ENSNBRG00000010525CPSF39986.804ENSSDUG00000002828cpsf38886.804Seriola_dumerili
ENSNBRG00000010525CPSF310096.860ENSSDUG00000018498CPSF310096.860Seriola_dumerili
ENSNBRG00000010525CPSF310096.232ENSSLDG00000005234CPSF310096.232Seriola_lalandi_dorsalis
ENSNBRG00000010525CPSF39986.963ENSSLDG00000008469cpsf38886.963Seriola_lalandi_dorsalis
ENSNBRG00000010525CPSF39969.683ENSSARG00000005186CPSF39269.683Sorex_araneus
ENSNBRG00000010525CPSF39984.385ENSSPUG00000015525CPSF39284.385Sphenodon_punctatus
ENSNBRG00000010525CPSF310095.604ENSSPAG00000002906CPSF310095.604Stegastes_partitus
ENSNBRG00000010525CPSF39980.406ENSSPAG00000018579cpsf39186.804Stegastes_partitus
ENSNBRG00000010525CPSF39887.700ENSSSCG00000020799CPSF39987.700Sus_scrofa
ENSNBRG00000010525CPSF39986.190ENSTGUG00000013016CPSF39286.190Taeniopygia_guttata
ENSNBRG00000010525CPSF39979.971ENSTRUG00000007030cpsf39779.950Takifugu_rubripes
ENSNBRG00000010525CPSF36479.607ENSTRUG00000013905CPSF310079.607Takifugu_rubripes
ENSNBRG00000010525CPSF38388.141ENSTBEG00000002707CPSF37688.141Tupaia_belangeri
ENSNBRG00000010525CPSF38669.252ENSTTRG00000000861CPSF38069.252Tursiops_truncatus
ENSNBRG00000010525CPSF39587.129ENSUAMG00000007535CPSF38787.129Ursus_americanus
ENSNBRG00000010525CPSF39986.508ENSUMAG00000003676CPSF39786.508Ursus_maritimus
ENSNBRG00000010525CPSF39486.455ENSVPAG00000008041CPSF39486.455Vicugna_pacos
ENSNBRG00000010525CPSF39986.508ENSVVUG00000002194CPSF39286.508Vulpes_vulpes
ENSNBRG00000010525CPSF39984.738ENSXETG00000008263cpsf39184.738Xenopus_tropicalis
ENSNBRG00000010525CPSF35991.689ENSXCOG00000000957-8791.689Xiphophorus_couchianus
ENSNBRG00000010525CPSF39984.786ENSXCOG00000019695cpsf39184.786Xiphophorus_couchianus
ENSNBRG00000010525CPSF310086.831ENSXMAG00000027291CPSF39193.819Xiphophorus_maculatus
ENSNBRG00000010525CPSF39984.628ENSXMAG00000009784cpsf39784.628Xiphophorus_maculatus

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