EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000010689 (Gene tree)
Gene ID: -
Gene Symbol: pum1
Alias: fb96a03|si:ch211-285e16.1|wu:fb96a03|wu:fb96a08|zgc:63671
Full Name: pumilio homolog 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 22623 bases
Position: chrJH422285.1:4023168-4045790
Accession: 102800256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000013872	PUF	PF00806.19	8.5e-71	1	8
ENSNBRP00000013872	PUF	PF00806.19	8.5e-71	2	8
ENSNBRP00000013872	PUF	PF00806.19	8.5e-71	3	8
ENSNBRP00000013872	PUF	PF00806.19	8.5e-71	4	8
ENSNBRP00000013872	PUF	PF00806.19	8.5e-71	5	8
ENSNBRP00000013872	PUF	PF00806.19	8.5e-71	6	8
ENSNBRP00000013872	PUF	PF00806.19	8.5e-71	7	8
ENSNBRP00000013872	PUF	PF00806.19	8.5e-71	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000014250	-	2778	XM_006787746	ENSNBRP00000013872	925 (aa)	XP_006787809	-

Gene Model

Click here to download ENSNBRG00000010689's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000010689's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000010689	pum1	100	83.663	ENSG00000134644	PUM1	100	78.452	Homo_sapiens
ENSNBRG00000010689	pum1	100	99.125	ENSAPOG00000021632	pum1	79	99.125	Acanthochromis_polyacanthus
ENSNBRG00000010689	pum1	100	83.374	ENSAMEG00000017656	PUM1	77	81.235	Ailuropoda_melanoleuca
ENSNBRG00000010689	pum1	100	98.875	ENSACIG00000021013	pum1	79	98.875	Amphilophus_citrinellus
ENSNBRG00000010689	pum1	100	99.125	ENSAOCG00000003944	pum1	79	99.125	Amphiprion_ocellaris
ENSNBRG00000010689	pum1	100	99.125	ENSAPEG00000014550	pum1	79	99.125	Amphiprion_percula
ENSNBRG00000010689	pum1	100	98.750	ENSATEG00000016004	pum1	79	98.750	Anabas_testudineus
ENSNBRG00000010689	pum1	100	83.970	ENSAPLG00000009351	PUM1	80	81.582	Anas_platyrhynchos
ENSNBRG00000010689	pum1	100	83.045	ENSACAG00000000682	PUM1	78	83.292	Anolis_carolinensis
ENSNBRG00000010689	pum1	100	83.436	ENSANAG00000027865	PUM1	100	78.347	Aotus_nancymaae
ENSNBRG00000010689	pum1	86	99.250	ENSACLG00000019354	pum1	75	99.250	Astatotilapia_calliptera
ENSNBRG00000010689	pum1	100	87.516	ENSAMXG00000020607	pum1	77	87.266	Astyanax_mexicanus
ENSNBRG00000010689	pum1	100	83.911	ENSBTAG00000018979	PUM1	100	78.579	Bos_taurus
ENSNBRG00000010689	pum1	100	83.684	ENSCJAG00000006035	PUM1	100	78.452	Callithrix_jacchus
ENSNBRG00000010689	pum1	100	81.807	ENSCAFG00000011205	PUM1	57	88.403	Canis_familiaris
ENSNBRG00000010689	pum1	90	83.610	ENSCAFG00020024616	PUM1	98	81.548	Canis_lupus_dingo
ENSNBRG00000010689	pum1	100	83.911	ENSCHIG00000012952	PUM1	87	81.762	Capra_hircus
ENSNBRG00000010689	pum1	100	83.231	ENSTSYG00000008868	PUM1	100	78.556	Carlito_syrichta
ENSNBRG00000010689	pum1	100	83.210	ENSCPOG00000031613	PUM1	100	78.138	Cavia_porcellus
ENSNBRG00000010689	pum1	100	83.457	ENSCATG00000017991	PUM1	100	78.452	Cercocebus_atys
ENSNBRG00000010689	pum1	100	83.210	ENSCLAG00000007662	PUM1	100	78.138	Chinchilla_lanigera
ENSNBRG00000010689	pum1	100	81.752	ENSCSAG00000001028	PUM1	80	79.512	Chlorocebus_sabaeus
ENSNBRG00000010689	pum1	91	73.312	ENSCHOG00000010245	PUM1	73	69.256	Choloepus_hoffmanni
ENSNBRG00000010689	pum1	100	83.086	ENSCPBG00000009288	PUM1	100	78.759	Chrysemys_picta_bellii
ENSNBRG00000010689	pum1	100	83.560	ENSCANG00000042606	PUM1	100	78.452	Colobus_angolensis_palliatus
ENSNBRG00000010689	pum1	100	83.395	ENSCGRG00001024949	Pum1	100	79.833	Cricetulus_griseus_chok1gshd
ENSNBRG00000010689	pum1	100	83.395	ENSCGRG00000014197	Pum1	100	79.833	Cricetulus_griseus_crigri
ENSNBRG00000010689	pum1	86	97.000	ENSCSEG00000015981	pum1	75	97.000	Cynoglossus_semilaevis
ENSNBRG00000010689	pum1	100	98.500	ENSCVAG00000007043	pum1	79	98.500	Cyprinodon_variegatus
ENSNBRG00000010689	pum1	100	89.401	ENSDARG00000099256	pum1	80	87.141	Danio_rerio
ENSNBRG00000010689	pum1	100	83.970	ENSDNOG00000010939	PUM1	80	81.829	Dasypus_novemcinctus
ENSNBRG00000010689	pum1	86	100.000	ENSETEG00000004355	PUM1	64	74.379	Echinops_telfairi
ENSNBRG00000010689	pum1	100	83.580	ENSEASG00005010813	PUM1	80	81.312	Equus_asinus_asinus
ENSNBRG00000010689	pum1	100	83.580	ENSECAG00000021369	PUM1	84	81.312	Equus_caballus
ENSNBRG00000010689	pum1	79	89.778	ENSEEUG00000003871	PUM1	62	90.222	Erinaceus_europaeus
ENSNBRG00000010689	pum1	100	91.698	ENSELUG00000002409	pum1	100	89.201	Esox_lucius
ENSNBRG00000010689	pum1	100	83.518	ENSFCAG00000010374	PUM1	100	78.556	Felis_catus
ENSNBRG00000010689	pum1	100	83.456	ENSFALG00000001214	PUM1	78	81.327	Ficedula_albicollis
ENSNBRG00000010689	pum1	100	83.086	ENSFDAG00000011319	PUM1	100	78.033	Fukomys_damarensis
ENSNBRG00000010689	pum1	71	97.732	ENSGMOG00000010491	pum1	79	91.955	Gadus_morhua
ENSNBRG00000010689	pum1	95	89.738	ENSGALG00000042598	PUM1	87	81.582	Gallus_gallus
ENSNBRG00000010689	pum1	100	98.125	ENSGAFG00000015617	pum1	79	98.125	Gambusia_affinis
ENSNBRG00000010689	pum1	100	96.770	ENSGACG00000005717	pum1	79	97.375	Gasterosteus_aculeatus
ENSNBRG00000010689	pum1	100	82.984	ENSGAGG00000001290	PUM1	77	92.308	Gopherus_agassizii
ENSNBRG00000010689	pum1	100	83.457	ENSGGOG00000011983	PUM1	100	78.452	Gorilla_gorilla
ENSNBRG00000010689	pum1	100	99.250	ENSHBUG00000018718	pum1	79	99.250	Haplochromis_burtoni
ENSNBRG00000010689	pum1	100	83.086	ENSHGLG00000013819	Pum1	100	78.033	Heterocephalus_glaber_female
ENSNBRG00000010689	pum1	100	83.086	ENSHGLG00100008621	Pum1	100	78.033	Heterocephalus_glaber_male
ENSNBRG00000010689	pum1	86	88.514	ENSHCOG00000005149	pum1	75	89.388	Hippocampus_comes
ENSNBRG00000010689	pum1	100	86.015	ENSIPUG00000020421	pum1	80	85.767	Ictalurus_punctatus
ENSNBRG00000010689	pum1	100	83.457	ENSSTOG00000010757	PUM1	100	78.452	Ictidomys_tridecemlineatus
ENSNBRG00000010689	pum1	100	83.457	ENSJJAG00000000530	Pum1	100	78.452	Jaculus_jaculus
ENSNBRG00000010689	pum1	100	98.125	ENSKMAG00000003481	pum1	79	98.125	Kryptolebias_marmoratus
ENSNBRG00000010689	pum1	100	97.875	ENSLBEG00000002527	pum1	79	97.875	Labrus_bergylta
ENSNBRG00000010689	pum1	100	81.327	ENSLACG00000017188	PUM1	79	77.833	Latimeria_chalumnae
ENSNBRG00000010689	pum1	100	87.732	ENSLOCG00000005210	pum1	79	87.113	Lepisosteus_oculatus
ENSNBRG00000010689	pum1	100	83.231	ENSLAFG00000003178	PUM1	80	81.582	Loxodonta_africana
ENSNBRG00000010689	pum1	100	83.457	ENSMFAG00000010291	PUM1	100	78.452	Macaca_fascicularis
ENSNBRG00000010689	pum1	100	83.457	ENSMMUG00000013520	PUM1	100	78.452	Macaca_mulatta
ENSNBRG00000010689	pum1	100	83.457	ENSMNEG00000034639	PUM1	100	78.452	Macaca_nemestrina
ENSNBRG00000010689	pum1	100	83.560	ENSMLEG00000038743	PUM1	100	78.452	Mandrillus_leucophaeus
ENSNBRG00000010689	pum1	100	98.250	ENSMAMG00000011606	pum1	79	98.250	Mastacembelus_armatus
ENSNBRG00000010689	pum1	100	100.000	ENSMZEG00005005834	pum1	79	100.000	Maylandia_zebra
ENSNBRG00000010689	pum1	100	84.198	ENSMGAG00000000724	PUM1	87	82.054	Meleagris_gallopavo
ENSNBRG00000010689	pum1	100	83.292	ENSMAUG00000022090	Pum1	100	80.021	Mesocricetus_auratus
ENSNBRG00000010689	pum1	100	83.210	ENSMICG00000007713	-	100	78.138	Microcebus_murinus
ENSNBRG00000010689	pum1	99	81.582	ENSMICG00000012213	-	78	88.620	Microcebus_murinus
ENSNBRG00000010689	pum1	100	83.313	ENSMOCG00000015463	Pum1	100	79.937	Microtus_ochrogaster
ENSNBRG00000010689	pum1	100	82.737	ENSMODG00000017067	PUM1	80	81.088	Monodelphis_domestica
ENSNBRG00000010689	pum1	100	82.921	MGP_CAROLIEiJ_G0026549	Pum1	100	78.033	Mus_caroli
ENSNBRG00000010689	pum1	100	82.797	ENSMUSG00000028580	Pum1	100	78.033	Mus_musculus
ENSNBRG00000010689	pum1	100	82.797	MGP_PahariEiJ_G0028881	Pum1	100	78.033	Mus_pahari
ENSNBRG00000010689	pum1	100	82.673	MGP_SPRETEiJ_G0027529	Pum1	100	77.929	Mus_spretus
ENSNBRG00000010689	pum1	100	83.704	ENSMPUG00000015454	PUM1	80	81.312	Mustela_putorius_furo
ENSNBRG00000010689	pum1	100	83.684	ENSMLUG00000006490	PUM1	80	81.289	Myotis_lucifugus
ENSNBRG00000010689	pum1	100	83.457	ENSNGAG00000002378	Pum1	100	78.452	Nannospalax_galili
ENSNBRG00000010689	pum1	100	81.953	ENSNLEG00000001151	PUM1	100	77.301	Nomascus_leucogenys
ENSNBRG00000010689	pum1	76	77.931	ENSMEUG00000000976	-	54	80.038	Notamacropus_eugenii
ENSNBRG00000010689	pum1	78	91.589	ENSOPRG00000001776	PUM1	50	91.765	Ochotona_princeps
ENSNBRG00000010689	pum1	100	83.210	ENSODEG00000003465	PUM1	100	78.138	Octodon_degus
ENSNBRG00000010689	pum1	100	99.375	ENSONIG00000002290	pum1	79	99.375	Oreochromis_niloticus
ENSNBRG00000010689	pum1	82	68.260	ENSOANG00000004902	-	77	64.651	Ornithorhynchus_anatinus
ENSNBRG00000010689	pum1	99	83.643	ENSOCUG00000008641	PUM1	79	81.366	Oryctolagus_cuniculus
ENSNBRG00000010689	pum1	100	98.250	ENSORLG00000011482	pum1	79	98.250	Oryzias_latipes
ENSNBRG00000010689	pum1	100	98.250	ENSORLG00020019461	pum1	79	98.250	Oryzias_latipes_hni
ENSNBRG00000010689	pum1	100	98.375	ENSORLG00015011375	pum1	79	98.375	Oryzias_latipes_hsok
ENSNBRG00000010689	pum1	100	79.336	ENSOGAG00000011063	PUM1	80	77.189	Otolemur_garnettii
ENSNBRG00000010689	pum1	100	82.367	ENSOARG00000001899	PUM1	80	80.222	Ovis_aries
ENSNBRG00000010689	pum1	100	83.457	ENSPPAG00000044003	PUM1	100	78.452	Pan_paniscus
ENSNBRG00000010689	pum1	100	83.684	ENSPPRG00000001370	PUM1	100	78.556	Panthera_pardus
ENSNBRG00000010689	pum1	100	83.436	ENSPTIG00000010798	PUM1	100	78.556	Panthera_tigris_altaica
ENSNBRG00000010689	pum1	100	83.457	ENSPTRG00000000453	PUM1	100	78.452	Pan_troglodytes
ENSNBRG00000010689	pum1	100	83.560	ENSPANG00000016338	PUM1	100	78.452	Papio_anubis
ENSNBRG00000010689	pum1	94	92.978	ENSPKIG00000010578	pum1	79	82.331	Paramormyrops_kingsleyae
ENSNBRG00000010689	pum1	100	84.302	ENSPSIG00000014118	PUM1	85	81.908	Pelodiscus_sinensis
ENSNBRG00000010689	pum1	100	95.208	ENSPMGG00000005836	pum1	100	95.208	Periophthalmus_magnuspinnatus
ENSNBRG00000010689	pum1	100	83.292	ENSPEMG00000010009	Pum1	100	80.021	Peromyscus_maniculatus_bairdii
ENSNBRG00000010689	pum1	92	90.843	ENSPCIG00000014151	PUM1	100	78.639	Phascolarctos_cinereus
ENSNBRG00000010689	pum1	93	98.500	ENSPFOG00000007289	pum1	99	97.531	Poecilia_formosa
ENSNBRG00000010689	pum1	100	98.500	ENSPLAG00000007256	pum1	86	98.500	Poecilia_latipinna
ENSNBRG00000010689	pum1	86	98.375	ENSPMEG00000019543	pum1	74	98.375	Poecilia_mexicana
ENSNBRG00000010689	pum1	100	98.500	ENSPREG00000005195	pum1	100	95.638	Poecilia_reticulata
ENSNBRG00000010689	pum1	100	83.457	ENSPPYG00000001621	PUM1	78	81.312	Pongo_abelii
ENSNBRG00000010689	pum1	81	92.593	ENSPCAG00000001979	PUM1	61	92.593	Procavia_capensis
ENSNBRG00000010689	pum1	100	83.210	ENSPCOG00000004398	PUM1	100	78.138	Propithecus_coquereli
ENSNBRG00000010689	pum1	100	80.741	ENSPVAG00000005207	PUM1	77	78.589	Pteropus_vampyrus
ENSNBRG00000010689	pum1	100	99.250	ENSPNYG00000009518	pum1	79	99.250	Pundamilia_nyererei
ENSNBRG00000010689	pum1	100	90.137	ENSPNAG00000026728	pum1	87	87.391	Pygocentrus_nattereri
ENSNBRG00000010689	pum1	100	83.416	ENSRNOG00000011709	Pum1	80	81.266	Rattus_norvegicus
ENSNBRG00000010689	pum1	100	83.457	ENSRBIG00000042521	PUM1	100	78.452	Rhinopithecus_bieti
ENSNBRG00000010689	pum1	100	83.663	ENSRROG00000020156	PUM1	100	78.452	Rhinopithecus_roxellana
ENSNBRG00000010689	pum1	100	83.457	ENSSBOG00000032037	PUM1	100	78.452	Saimiri_boliviensis_boliviensis
ENSNBRG00000010689	pum1	100	82.737	ENSSHAG00000010918	PUM1	80	81.211	Sarcophilus_harrisii
ENSNBRG00000010689	pum1	100	98.000	ENSSMAG00000010918	pum1	79	98.000	Scophthalmus_maximus
ENSNBRG00000010689	pum1	100	99.000	ENSSDUG00000009021	pum1	79	99.000	Seriola_dumerili
ENSNBRG00000010689	pum1	100	99.000	ENSSLDG00000009667	pum1	86	99.000	Seriola_lalandi_dorsalis
ENSNBRG00000010689	pum1	97	83.376	ENSSARG00000003055	PUM1	75	81.130	Sorex_araneus
ENSNBRG00000010689	pum1	100	83.951	ENSSPUG00000006267	PUM1	80	81.559	Sphenodon_punctatus
ENSNBRG00000010689	pum1	100	99.125	ENSSPAG00000016636	pum1	79	99.125	Stegastes_partitus
ENSNBRG00000010689	pum1	100	83.580	ENSSSCG00000003591	PUM1	91	81.381	Sus_scrofa
ENSNBRG00000010689	pum1	100	98.500	ENSTRUG00000013121	pum1	100	97.514	Takifugu_rubripes
ENSNBRG00000010689	pum1	100	98.127	ENSTNIG00000016983	pum1	79	98.127	Tetraodon_nigroviridis
ENSNBRG00000010689	pum1	83	90.244	ENSTBEG00000013810	PUM1	68	90.244	Tupaia_belangeri
ENSNBRG00000010689	pum1	90	92.105	ENSTTRG00000007436	PUM1	69	92.105	Tursiops_truncatus
ENSNBRG00000010689	pum1	98	82.244	ENSUAMG00000018262	-	78	79.772	Ursus_americanus
ENSNBRG00000010689	pum1	58	90.602	ENSUMAG00000009211	PUM1	55	91.084	Ursus_maritimus
ENSNBRG00000010689	pum1	100	83.580	ENSVPAG00000005902	PUM1	80	81.436	Vicugna_pacos
ENSNBRG00000010689	pum1	100	83.477	ENSVVUG00000014631	PUM1	87	81.335	Vulpes_vulpes
ENSNBRG00000010689	pum1	100	78.668	ENSXETG00000012904	pum1	79	77.256	Xenopus_tropicalis
ENSNBRG00000010689	pum1	100	98.125	ENSXMAG00000002945	pum1	86	98.125	Xiphophorus_maculatus