EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000010704 (Gene tree)
Gene ID: 102786413
Gene Symbol: c1d
Alias: zgc:103509
Full Name: nuclear nucleic acid-binding protein C1D-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 6759 bases
Position: chrJH422278.1:6367989-6374747
Accession: 102786413
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000013847	Sas10_Utp3	PF04000.15	5.1e-18	1	1
ENSNBRP00000013857	Sas10_Utp3	PF04000.15	5.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000014225	-	656	XM_006783547	ENSNBRP00000013847	146 (aa)	XP_006783610	UPI0003EC4311
ENSNBRT00000014235	-	468	-	ENSNBRP00000013857	155 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000010704's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000010704's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000010704	c1d	92	61.194	ENSG00000197223	C1D	82	66.379	Homo_sapiens
ENSNBRG00000010704	c1d	97	82.993	ENSAPOG00000005466	c1d	99	75.974	Acanthochromis_polyacanthus
ENSNBRG00000010704	c1d	87	63.780	ENSAMEG00000004859	C1D	79	66.379	Ailuropoda_melanoleuca
ENSNBRG00000010704	c1d	88	92.969	ENSACIG00000012684	c1d	80	90.244	Amphilophus_citrinellus
ENSNBRG00000010704	c1d	97	80.851	ENSAOCG00000020354	c1d	96	77.703	Amphiprion_ocellaris
ENSNBRG00000010704	c1d	98	80.405	ENSAPEG00000001403	c1d	96	78.378	Amphiprion_percula
ENSNBRG00000010704	c1d	99	81.879	ENSATEG00000012922	c1d	100	78.710	Anabas_testudineus
ENSNBRG00000010704	c1d	93	62.500	ENSAPLG00000009320	C1D	83	67.500	Anas_platyrhynchos
ENSNBRG00000010704	c1d	81	69.492	ENSACAG00000001337	C1D	95	69.828	Anolis_carolinensis
ENSNBRG00000010704	c1d	92	57.463	ENSANAG00000005773	-	82	62.069	Aotus_nancymaae
ENSNBRG00000010704	c1d	92	60.448	ENSANAG00000035972	-	82	65.517	Aotus_nancymaae
ENSNBRG00000010704	c1d	97	98.592	ENSACLG00000026206	c1d	95	98.592	Astatotilapia_calliptera
ENSNBRG00000010704	c1d	88	71.318	ENSAMXG00000043212	c1d	84	73.171	Astyanax_mexicanus
ENSNBRG00000010704	c1d	92	61.194	ENSBTAG00000049002	C1D	82	66.379	Bos_taurus
ENSNBRG00000010704	c1d	92	61.194	ENSCJAG00000006589	C1D	76	66.379	Callithrix_jacchus
ENSNBRG00000010704	c1d	71	62.500	ENSCJAG00000044668	-	81	62.500	Callithrix_jacchus
ENSNBRG00000010704	c1d	87	65.354	ENSCAFG00000030099	C1D	87	65.041	Canis_familiaris
ENSNBRG00000010704	c1d	87	65.354	ENSCAFG00020026997	C1D	87	65.041	Canis_lupus_dingo
ENSNBRG00000010704	c1d	92	61.194	ENSCHIG00000025729	C1D	82	66.379	Capra_hircus
ENSNBRG00000010704	c1d	75	63.303	ENSTSYG00000026573	-	70	62.727	Carlito_syrichta
ENSNBRG00000010704	c1d	92	61.194	ENSTSYG00000035739	-	82	66.379	Carlito_syrichta
ENSNBRG00000010704	c1d	73	59.434	ENSCAPG00000011523	-	88	59.434	Cavia_aperea
ENSNBRG00000010704	c1d	92	64.179	ENSCPOG00000037986	-	87	66.667	Cavia_porcellus
ENSNBRG00000010704	c1d	73	60.377	ENSCPOG00000020112	-	88	60.377	Cavia_porcellus
ENSNBRG00000010704	c1d	92	61.194	ENSCCAG00000030405	-	82	66.379	Cebus_capucinus
ENSNBRG00000010704	c1d	92	60.448	ENSCATG00000045336	C1D	82	66.379	Cercocebus_atys
ENSNBRG00000010704	c1d	92	60.448	ENSCATG00000043348	-	82	65.517	Cercocebus_atys
ENSNBRG00000010704	c1d	88	63.281	ENSCLAG00000011883	C1D	83	65.812	Chinchilla_lanigera
ENSNBRG00000010704	c1d	87	62.992	ENSCSAG00000014811	C1D	82	66.379	Chlorocebus_sabaeus
ENSNBRG00000010704	c1d	92	61.194	ENSCHOG00000006719	C1D	65	66.379	Choloepus_hoffmanni
ENSNBRG00000010704	c1d	92	61.940	ENSCPBG00000014451	C1D	80	66.949	Chrysemys_picta_bellii
ENSNBRG00000010704	c1d	82	47.059	ENSCING00000020906	-	62	47.059	Ciona_intestinalis
ENSNBRG00000010704	c1d	84	47.154	ENSCSAVG00000000150	-	68	47.059	Ciona_savignyi
ENSNBRG00000010704	c1d	68	66.000	ENSCANG00000036599	-	81	66.000	Colobus_angolensis_palliatus
ENSNBRG00000010704	c1d	92	60.448	ENSCANG00000035564	C1D	87	61.719	Colobus_angolensis_palliatus
ENSNBRG00000010704	c1d	84	65.041	ENSCGRG00001023376	C1d	87	63.281	Cricetulus_griseus_chok1gshd
ENSNBRG00000010704	c1d	84	65.041	ENSCGRG00000010245	C1d	87	63.281	Cricetulus_griseus_crigri
ENSNBRG00000010704	c1d	97	74.830	ENSCSEG00000000587	c1d	86	81.301	Cynoglossus_semilaevis
ENSNBRG00000010704	c1d	98	76.190	ENSCVAG00000004603	c1d	97	74.658	Cyprinodon_variegatus
ENSNBRG00000010704	c1d	81	68.644	ENSDARG00000021112	c1d	83	66.667	Danio_rerio
ENSNBRG00000010704	c1d	92	53.731	ENSDNOG00000046068	-	82	57.759	Dasypus_novemcinctus
ENSNBRG00000010704	c1d	87	62.205	ENSDORG00000003300	C1d	82	64.655	Dipodomys_ordii
ENSNBRG00000010704	c1d	65	66.316	ENSETEG00000014857	C1D	81	74.026	Echinops_telfairi
ENSNBRG00000010704	c1d	83	52.893	ENSEBUG00000006874	c1d	72	55.263	Eptatretus_burgeri
ENSNBRG00000010704	c1d	92	61.194	ENSEASG00005007307	C1D	80	64.228	Equus_asinus_asinus
ENSNBRG00000010704	c1d	87	63.780	ENSECAG00000002187	C1D	88	64.228	Equus_caballus
ENSNBRG00000010704	c1d	87	73.228	ENSELUG00000014823	c1d	84	73.984	Esox_lucius
ENSNBRG00000010704	c1d	92	61.194	ENSFCAG00000028933	C1D	82	66.379	Felis_catus
ENSNBRG00000010704	c1d	82	67.227	ENSFALG00000013640	C1D	70	68.103	Ficedula_albicollis
ENSNBRG00000010704	c1d	92	61.194	ENSFDAG00000010462	-	82	66.379	Fukomys_damarensis
ENSNBRG00000010704	c1d	92	51.852	ENSFDAG00000014175	-	80	55.556	Fukomys_damarensis
ENSNBRG00000010704	c1d	93	79.412	ENSFHEG00000010545	c1d	93	76.224	Fundulus_heteroclitus
ENSNBRG00000010704	c1d	83	75.207	ENSGMOG00000013911	-	93	76.923	Gadus_morhua
ENSNBRG00000010704	c1d	82	69.167	ENSGALG00000008765	C1D	86	66.935	Gallus_gallus
ENSNBRG00000010704	c1d	99	76.351	ENSGAFG00000012578	c1d	95	72.973	Gambusia_affinis
ENSNBRG00000010704	c1d	83	81.818	ENSGACG00000011981	c1d	96	79.675	Gasterosteus_aculeatus
ENSNBRG00000010704	c1d	82	65.833	ENSGAGG00000013383	C1D	80	66.102	Gopherus_agassizii
ENSNBRG00000010704	c1d	87	63.780	ENSGGOG00000025982	-	64	66.379	Gorilla_gorilla
ENSNBRG00000010704	c1d	94	58.156	ENSGGOG00000022296	-	87	62.602	Gorilla_gorilla
ENSNBRG00000010704	c1d	89	60.902	ENSGGOG00000025808	-	70	63.115	Gorilla_gorilla
ENSNBRG00000010704	c1d	100	98.630	ENSHBUG00000018531	c1d	93	94.194	Haplochromis_burtoni
ENSNBRG00000010704	c1d	84	65.854	ENSHGLG00000012332	-	82	68.103	Heterocephalus_glaber_female
ENSNBRG00000010704	c1d	79	62.609	ENSHGLG00000021219	-	82	62.609	Heterocephalus_glaber_female
ENSNBRG00000010704	c1d	92	62.687	ENSHGLG00100000221	-	82	68.103	Heterocephalus_glaber_male
ENSNBRG00000010704	c1d	79	63.478	ENSHGLG00100019951	-	82	63.478	Heterocephalus_glaber_male
ENSNBRG00000010704	c1d	99	75.342	ENSHCOG00000014568	C1D	99	70.946	Hippocampus_comes
ENSNBRG00000010704	c1d	99	75.342	ENSHCOG00000014589	c1d	99	70.946	Hippocampus_comes
ENSNBRG00000010704	c1d	86	65.891	ENSIPUG00000018661	c1d	80	68.966	Ictalurus_punctatus
ENSNBRG00000010704	c1d	87	63.780	ENSSTOG00000012346	C1D	82	66.379	Ictidomys_tridecemlineatus
ENSNBRG00000010704	c1d	83	62.791	ENSJJAG00000023186	-	89	66.667	Jaculus_jaculus
ENSNBRG00000010704	c1d	89	55.970	ENSJJAG00000016086	-	88	58.537	Jaculus_jaculus
ENSNBRG00000010704	c1d	88	62.016	ENSJJAG00000009540	-	89	62.602	Jaculus_jaculus
ENSNBRG00000010704	c1d	86	61.111	ENSJJAG00000005044	-	83	63.478	Jaculus_jaculus
ENSNBRG00000010704	c1d	99	79.054	ENSKMAG00000015077	c1d	99	77.124	Kryptolebias_marmoratus
ENSNBRG00000010704	c1d	97	81.633	ENSLBEG00000008351	c1d	99	75.974	Labrus_bergylta
ENSNBRG00000010704	c1d	97	63.830	ENSLACG00000007516	C1D	78	71.552	Latimeria_chalumnae
ENSNBRG00000010704	c1d	99	66.207	ENSLOCG00000016024	c1d	82	73.333	Lepisosteus_oculatus
ENSNBRG00000010704	c1d	92	60.448	ENSLAFG00000002083	C1D	87	63.415	Loxodonta_africana
ENSNBRG00000010704	c1d	92	60.448	ENSMFAG00000034034	-	82	65.517	Macaca_fascicularis
ENSNBRG00000010704	c1d	92	59.701	ENSMFAG00000028681	-	82	65.517	Macaca_fascicularis
ENSNBRG00000010704	c1d	92	60.448	ENSMFAG00000034261	C1D	82	66.379	Macaca_fascicularis
ENSNBRG00000010704	c1d	87	62.992	ENSMMUG00000041557	C1D	83	66.379	Macaca_mulatta
ENSNBRG00000010704	c1d	92	59.701	ENSMMUG00000043184	-	82	64.655	Macaca_mulatta
ENSNBRG00000010704	c1d	92	59.701	ENSMMUG00000017209	-	82	65.517	Macaca_mulatta
ENSNBRG00000010704	c1d	92	60.448	ENSMNEG00000020626	-	82	65.517	Macaca_nemestrina
ENSNBRG00000010704	c1d	92	60.448	ENSMNEG00000040612	C1D	82	66.379	Macaca_nemestrina
ENSNBRG00000010704	c1d	92	60.448	ENSMLEG00000028412	-	82	65.517	Mandrillus_leucophaeus
ENSNBRG00000010704	c1d	92	60.448	ENSMLEG00000027619	C1D	82	66.379	Mandrillus_leucophaeus
ENSNBRG00000010704	c1d	97	79.592	ENSMAMG00000022156	c1d	99	76.623	Mastacembelus_armatus
ENSNBRG00000010704	c1d	100	98.630	ENSMZEG00005027343	c1d	100	98.630	Maylandia_zebra
ENSNBRG00000010704	c1d	89	63.846	ENSMGAG00000004517	C1D	87	66.667	Meleagris_gallopavo
ENSNBRG00000010704	c1d	87	63.780	ENSMAUG00000008974	C1d	87	63.281	Mesocricetus_auratus
ENSNBRG00000010704	c1d	92	62.687	ENSMICG00000032141	C1D	82	68.103	Microcebus_murinus
ENSNBRG00000010704	c1d	86	64.800	ENSMOCG00000010860	C1d	87	65.041	Microtus_ochrogaster
ENSNBRG00000010704	c1d	97	76.871	ENSMMOG00000007332	c1d	75	86.207	Mola_mola
ENSNBRG00000010704	c1d	82	66.387	ENSMODG00000003561	C1D	83	66.949	Monodelphis_domestica
ENSNBRG00000010704	c1d	97	84.507	ENSMALG00000020864	c1d	99	81.208	Monopterus_albus
ENSNBRG00000010704	c1d	87	64.567	MGP_CAROLIEiJ_G0016110	C1d	100	64.228	Mus_caroli
ENSNBRG00000010704	c1d	87	64.567	ENSMUSG00000000581	C1d	100	64.228	Mus_musculus
ENSNBRG00000010704	c1d	90	63.636	MGP_PahariEiJ_G0016781	C1d	100	65.041	Mus_pahari
ENSNBRG00000010704	c1d	87	64.567	MGP_SPRETEiJ_G0016952	C1d	100	64.228	Mus_spretus
ENSNBRG00000010704	c1d	92	61.940	ENSMPUG00000006224	C1D	82	67.241	Mustela_putorius_furo
ENSNBRG00000010704	c1d	90	62.121	ENSMLUG00000029990	-	82	66.379	Myotis_lucifugus
ENSNBRG00000010704	c1d	90	63.636	ENSMLUG00000010791	-	82	68.103	Myotis_lucifugus
ENSNBRG00000010704	c1d	90	62.121	ENSMLUG00000024947	-	82	66.379	Myotis_lucifugus
ENSNBRG00000010704	c1d	75	60.000	ENSNGAG00000012482	-	85	60.748	Nannospalax_galili
ENSNBRG00000010704	c1d	94	55.319	ENSNGAG00000016675	-	87	57.480	Nannospalax_galili
ENSNBRG00000010704	c1d	89	60.448	ENSNGAG00000011872	-	82	63.793	Nannospalax_galili
ENSNBRG00000010704	c1d	87	63.780	ENSNLEG00000032919	-	64	66.379	Nomascus_leucogenys
ENSNBRG00000010704	c1d	86	63.200	ENSOPRG00000009586	C1D	82	65.517	Ochotona_princeps
ENSNBRG00000010704	c1d	80	58.974	ENSODEG00000018525	-	81	60.526	Octodon_degus
ENSNBRG00000010704	c1d	86	64.000	ENSODEG00000018885	-	83	66.379	Octodon_degus
ENSNBRG00000010704	c1d	86	64.000	ENSODEG00000011242	-	82	66.379	Octodon_degus
ENSNBRG00000010704	c1d	99	97.241	ENSONIG00000001233	c1d	100	94.667	Oreochromis_niloticus
ENSNBRG00000010704	c1d	65	74.737	ENSOANG00000008385	C1D	84	75.269	Ornithorhynchus_anatinus
ENSNBRG00000010704	c1d	88	62.500	ENSOCUG00000025587	-	82	65.517	Oryctolagus_cuniculus
ENSNBRG00000010704	c1d	88	62.500	ENSOCUG00000009771	-	82	65.517	Oryctolagus_cuniculus
ENSNBRG00000010704	c1d	98	77.181	ENSORLG00000021968	c1d	95	72.297	Oryzias_latipes
ENSNBRG00000010704	c1d	98	77.852	ENSORLG00020000507	c1d	96	72.973	Oryzias_latipes_hni
ENSNBRG00000010704	c1d	98	77.181	ENSORLG00015004594	c1d	94	72.297	Oryzias_latipes_hsok
ENSNBRG00000010704	c1d	98	77.027	ENSOMEG00000004672	c1d	99	74.839	Oryzias_melastigma
ENSNBRG00000010704	c1d	87	62.205	ENSOGAG00000027934	-	82	64.655	Otolemur_garnettii
ENSNBRG00000010704	c1d	92	61.194	ENSOARG00000019931	C1D	82	66.379	Ovis_aries
ENSNBRG00000010704	c1d	94	58.571	ENSPPAG00000040091	-	70	63.115	Pan_paniscus
ENSNBRG00000010704	c1d	92	61.194	ENSPPAG00000037847	-	82	66.379	Pan_paniscus
ENSNBRG00000010704	c1d	55	58.025	ENSPPRG00000022830	-	61	61.429	Panthera_pardus
ENSNBRG00000010704	c1d	92	61.194	ENSPPRG00000017045	-	82	66.379	Panthera_pardus
ENSNBRG00000010704	c1d	92	61.194	ENSPTIG00000009414	C1D	82	66.379	Panthera_tigris_altaica
ENSNBRG00000010704	c1d	92	61.194	ENSPTRG00000023558	C1D	82	66.379	Pan_troglodytes
ENSNBRG00000010704	c1d	87	62.992	ENSPANG00000002886	C1D	64	66.379	Papio_anubis
ENSNBRG00000010704	c1d	92	61.194	ENSPANG00000000501	-	82	66.379	Papio_anubis
ENSNBRG00000010704	c1d	82	68.908	ENSPKIG00000004877	c1d	81	67.500	Paramormyrops_kingsleyae
ENSNBRG00000010704	c1d	92	61.940	ENSPSIG00000010015	C1D	81	66.949	Pelodiscus_sinensis
ENSNBRG00000010704	c1d	97	80.952	ENSPMGG00000009326	c1d	99	76.623	Periophthalmus_magnuspinnatus
ENSNBRG00000010704	c1d	82	65.000	ENSPCIG00000018629	-	85	65.000	Phascolarctos_cinereus
ENSNBRG00000010704	c1d	94	54.015	ENSPCIG00000006831	-	85	58.537	Phascolarctos_cinereus
ENSNBRG00000010704	c1d	99	78.378	ENSPFOG00000003686	c1d	99	73.203	Poecilia_formosa
ENSNBRG00000010704	c1d	99	78.378	ENSPLAG00000000228	c1d	99	73.203	Poecilia_latipinna
ENSNBRG00000010704	c1d	99	78.378	ENSPMEG00000023213	c1d	99	73.203	Poecilia_mexicana
ENSNBRG00000010704	c1d	97	79.452	ENSPREG00000000742	c1d	99	73.203	Poecilia_reticulata
ENSNBRG00000010704	c1d	92	61.194	ENSPPYG00000012354	C1D	64	66.379	Pongo_abelii
ENSNBRG00000010704	c1d	92	58.209	ENSPPYG00000002294	-	82	62.931	Pongo_abelii
ENSNBRG00000010704	c1d	87	51.181	ENSPCAG00000010088	C1D	65	54.310	Procavia_capensis
ENSNBRG00000010704	c1d	92	62.687	ENSPCOG00000016112	C1D	82	68.103	Propithecus_coquereli
ENSNBRG00000010704	c1d	87	63.780	ENSPVAG00000012692	C1D	65	66.379	Pteropus_vampyrus
ENSNBRG00000010704	c1d	100	97.945	ENSPNYG00000008789	c1d	100	97.945	Pundamilia_nyererei
ENSNBRG00000010704	c1d	86	73.600	ENSPNAG00000004219	c1d	80	76.068	Pygocentrus_nattereri
ENSNBRG00000010704	c1d	87	64.567	ENSRNOG00000005982	C1d	87	63.281	Rattus_norvegicus
ENSNBRG00000010704	c1d	92	59.701	ENSRBIG00000026211	-	82	64.655	Rhinopithecus_bieti
ENSNBRG00000010704	c1d	92	60.448	ENSRROG00000029013	C1D	82	66.379	Rhinopithecus_roxellana
ENSNBRG00000010704	c1d	92	60.448	ENSRROG00000005944	-	82	65.517	Rhinopithecus_roxellana
ENSNBRG00000010704	c1d	92	61.194	ENSSBOG00000025275	C1D	82	66.379	Saimiri_boliviensis_boliviensis
ENSNBRG00000010704	c1d	82	65.833	ENSSHAG00000008352	C1D	57	66.387	Sarcophilus_harrisii
ENSNBRG00000010704	c1d	89	67.164	ENSSFOG00015010861	c1d	88	69.919	Scleropages_formosus
ENSNBRG00000010704	c1d	99	78.000	ENSSMAG00000019230	c1d	79	83.740	Scophthalmus_maximus
ENSNBRG00000010704	c1d	99	82.667	ENSSDUG00000020213	c1d	99	78.571	Seriola_dumerili
ENSNBRG00000010704	c1d	99	82.667	ENSSLDG00000017371	c1d	99	78.571	Seriola_lalandi_dorsalis
ENSNBRG00000010704	c1d	83	63.636	ENSSPUG00000006525	C1D	82	63.866	Sphenodon_punctatus
ENSNBRG00000010704	c1d	97	84.247	ENSSPAG00000008574	c1d	99	78.431	Stegastes_partitus
ENSNBRG00000010704	c1d	92	61.194	ENSSSCG00000039331	-	82	66.379	Sus_scrofa
ENSNBRG00000010704	c1d	77	53.782	ENSSSCG00000035701	-	95	53.782	Sus_scrofa
ENSNBRG00000010704	c1d	82	68.067	ENSTGUG00000002367	C1D	81	68.966	Taeniopygia_guttata
ENSNBRG00000010704	c1d	98	75.676	ENSTRUG00000012245	c1d	89	74.324	Takifugu_rubripes
ENSNBRG00000010704	c1d	95	78.322	ENSTNIG00000009827	c1d	80	86.441	Tetraodon_nigroviridis
ENSNBRG00000010704	c1d	90	61.364	ENSTBEG00000009797	C1D	87	64.228	Tupaia_belangeri
ENSNBRG00000010704	c1d	92	60.448	ENSTTRG00000013982	C1D	67	65.517	Tursiops_truncatus
ENSNBRG00000010704	c1d	92	52.555	ENSUAMG00000025246	C1D	77	58.772	Ursus_americanus
ENSNBRG00000010704	c1d	92	61.194	ENSUMAG00000021118	-	82	66.379	Ursus_maritimus
ENSNBRG00000010704	c1d	64	55.670	ENSUMAG00000006451	-	91	54.386	Ursus_maritimus
ENSNBRG00000010704	c1d	87	65.354	ENSVPAG00000012080	C1D	65	68.103	Vicugna_pacos
ENSNBRG00000010704	c1d	87	65.354	ENSVVUG00000027629	C1D	77	65.041	Vulpes_vulpes
ENSNBRG00000010704	c1d	84	65.041	ENSXETG00000025934	c1d	79	67.826	Xenopus_tropicalis
ENSNBRG00000010704	c1d	97	78.767	ENSXCOG00000013813	c1d	99	71.895	Xiphophorus_couchianus
ENSNBRG00000010704	c1d	97	79.452	ENSXMAG00000022273	c1d	99	72.549	Xiphophorus_maculatus