EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000010718 (Gene tree)
Gene ID: -
Gene Symbol: srek1
Alias: zgc:100974
Full Name: splicing regulatory glutamine/lysine-rich protein 1
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 5913 bases
Position: chrJH422319.1:3769984-3775896
Accession: ZDB-GENE-040801-132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000013858	RRM_1	PF00076.22	1.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000014236	-	561	-	ENSNBRP00000013858	186 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000010718's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000010718's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000010718	srek1	95	76.966	ENSG00000153914	SREK1	77	84.783	Homo_sapiens
ENSNBRG00000010718	srek1	99	87.166	ENSACIG00000015041	srek1	99	87.166	Amphilophus_citrinellus
ENSNBRG00000010718	srek1	96	76.243	ENSANAG00000031358	SREK1	92	76.243	Aotus_nancymaae
ENSNBRG00000010718	srek1	100	97.312	ENSACLG00000026754	srek1	63	97.312	Astatotilapia_calliptera
ENSNBRG00000010718	srek1	96	76.243	ENSCJAG00000015950	SREK1	92	76.243	Callithrix_jacchus
ENSNBRG00000010718	srek1	94	73.184	ENSCAFG00020019448	-	90	73.184	Canis_lupus_dingo
ENSNBRG00000010718	srek1	96	77.596	ENSTSYG00000036957	SREK1	92	77.596	Carlito_syrichta
ENSNBRG00000010718	srek1	98	75.543	ENSCATG00000031482	SREK1	92	76.243	Cercocebus_atys
ENSNBRG00000010718	srek1	95	76.966	ENSCPBG00000026866	SREK1	53	76.966	Chrysemys_picta_bellii
ENSNBRG00000010718	srek1	96	76.243	ENSCANG00000030421	SREK1	92	76.243	Colobus_angolensis_palliatus
ENSNBRG00000010718	srek1	99	87.500	ENSCVAG00000002411	srek1	88	87.500	Cyprinodon_variegatus
ENSNBRG00000010718	srek1	96	76.243	ENSDORG00000023425	-	92	76.243	Dipodomys_ordii
ENSNBRG00000010718	srek1	96	77.049	ENSEASG00005006829	-	92	77.049	Equus_asinus_asinus
ENSNBRG00000010718	srek1	96	77.049	ENSECAG00000036994	-	92	77.049	Equus_caballus
ENSNBRG00000010718	srek1	98	75.543	ENSGGOG00000004737	SREK1	92	76.243	Gorilla_gorilla
ENSNBRG00000010718	srek1	100	97.312	ENSHBUG00000007057	srek1	100	97.312	Haplochromis_burtoni
ENSNBRG00000010718	srek1	96	80.447	ENSHCOG00000017240	SREK1	53	80.447	Hippocampus_comes
ENSNBRG00000010718	srek1	96	75.956	ENSJJAG00000000214	-	92	75.956	Jaculus_jaculus
ENSNBRG00000010718	srek1	97	88.333	ENSLBEG00000022980	srek1	90	88.333	Labrus_bergylta
ENSNBRG00000010718	srek1	98	75.543	ENSMFAG00000039823	SREK1	92	76.243	Macaca_fascicularis
ENSNBRG00000010718	srek1	98	75.543	ENSMNEG00000030723	SREK1	92	76.243	Macaca_nemestrina
ENSNBRG00000010718	srek1	98	75.543	ENSMLEG00000039078	SREK1	92	76.243	Mandrillus_leucophaeus
ENSNBRG00000010718	srek1	100	97.312	ENSMZEG00005005719	srek1	100	97.312	Maylandia_zebra
ENSNBRG00000010718	srek1	68	75.000	ENSMGAG00000002047	SREK1	68	65.556	Meleagris_gallopavo
ENSNBRG00000010718	srek1	95	77.222	ENSMAUG00000010066	-	57	77.222	Mesocricetus_auratus
ENSNBRG00000010718	srek1	96	76.243	ENSMICG00000034959	SREK1	92	76.243	Microcebus_murinus
ENSNBRG00000010718	srek1	95	77.222	ENSMOCG00000001536	-	56	77.222	Microtus_ochrogaster
ENSNBRG00000010718	srek1	96	84.916	ENSMMOG00000008409	srek1	91	84.916	Mola_mola
ENSNBRG00000010718	srek1	96	76.503	ENSNGAG00000017527	-	92	76.503	Nannospalax_galili
ENSNBRG00000010718	srek1	97	91.111	ENSONIG00000011080	srek1	50	90.556	Oreochromis_niloticus
ENSNBRG00000010718	srek1	97	86.885	ENSORLG00015020471	srek1	94	86.885	Oryzias_latipes_hsok
ENSNBRG00000010718	srek1	98	75.543	ENSPPAG00000031605	SREK1	92	76.243	Pan_paniscus
ENSNBRG00000010718	srek1	98	75.543	ENSPTRG00000016936	SREK1	92	76.243	Pan_troglodytes
ENSNBRG00000010718	srek1	98	75.543	ENSPANG00000008953	SREK1	92	76.243	Papio_anubis
ENSNBRG00000010718	srek1	98	81.868	ENSPMGG00000017031	srek1	100	81.868	Periophthalmus_magnuspinnatus
ENSNBRG00000010718	srek1	95	77.222	ENSPEMG00000024051	-	58	77.222	Peromyscus_maniculatus_bairdii
ENSNBRG00000010718	srek1	96	76.796	ENSPCIG00000017750	-	92	76.796	Phascolarctos_cinereus
ENSNBRG00000010718	srek1	96	88.268	ENSPLAG00000008827	srek1	99	88.268	Poecilia_latipinna
ENSNBRG00000010718	srek1	93	87.861	ENSPREG00000019912	srek1	98	87.861	Poecilia_reticulata
ENSNBRG00000010718	srek1	96	76.243	ENSPCOG00000026230	SREK1	92	76.243	Propithecus_coquereli
ENSNBRG00000010718	srek1	96	76.216	ENSRBIG00000033818	SREK1	93	76.216	Rhinopithecus_bieti
ENSNBRG00000010718	srek1	98	75.543	ENSRROG00000017210	SREK1	92	76.243	Rhinopithecus_roxellana
ENSNBRG00000010718	srek1	98	75.000	ENSSBOG00000031230	SREK1	92	76.243	Saimiri_boliviensis_boliviensis
ENSNBRG00000010718	srek1	96	74.863	ENSSPUG00000016553	SREK1	58	74.863	Sphenodon_punctatus
ENSNBRG00000010718	srek1	97	89.444	ENSSPAG00000022298	srek1	99	89.444	Stegastes_partitus
ENSNBRG00000010718	srek1	98	81.868	ENSTRUG00000002960	srek1	98	81.868	Takifugu_rubripes
ENSNBRG00000010718	srek1	96	76.243	ENSUAMG00000022661	-	92	76.243	Ursus_americanus
ENSNBRG00000010718	srek1	72	88.806	ENSVVUG00000005890	-	91	73.333	Vulpes_vulpes
ENSNBRG00000010718	srek1	99	87.500	ENSXCOG00000017793	srek1	99	87.500	Xiphophorus_couchianus