EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000010987 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 7314 bases
Position: chrJH422274.1:12994850-13002163
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000014228	zf-C2H2	PF00096.26	2e-42	1	6
ENSNBRP00000014228	zf-C2H2	PF00096.26	2e-42	2	6
ENSNBRP00000014228	zf-C2H2	PF00096.26	2e-42	3	6
ENSNBRP00000014228	zf-C2H2	PF00096.26	2e-42	4	6
ENSNBRP00000014228	zf-C2H2	PF00096.26	2e-42	5	6
ENSNBRP00000014228	zf-C2H2	PF00096.26	2e-42	6	6
ENSNBRP00000014219	zf-C2H2	PF00096.26	3.6e-34	1	7
ENSNBRP00000014219	zf-C2H2	PF00096.26	3.6e-34	2	7
ENSNBRP00000014219	zf-C2H2	PF00096.26	3.6e-34	3	7
ENSNBRP00000014219	zf-C2H2	PF00096.26	3.6e-34	4	7
ENSNBRP00000014219	zf-C2H2	PF00096.26	3.6e-34	5	7
ENSNBRP00000014219	zf-C2H2	PF00096.26	3.6e-34	6	7
ENSNBRP00000014219	zf-C2H2	PF00096.26	3.6e-34	7	7
ENSNBRP00000014219	zf-met	PF12874.7	1.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000014605	-	1359	-	ENSNBRP00000014219	452 (aa)	-	-
ENSNBRT00000014614	-	2359	-	ENSNBRP00000014228	741 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000010987's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000010987's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000010987	-	81	37.097	ENSNBRG00000022534	znf646	89	31.690
ENSNBRG00000010987	-	89	34.973	ENSNBRG00000016169	-	80	35.127
ENSNBRG00000010987	-	72	36.154	ENSNBRG00000024086	-	59	35.926
ENSNBRG00000010987	-	74	46.117	ENSNBRG00000000523	-	66	38.636
ENSNBRG00000010987	-	72	50.000	ENSNBRG00000000793	-	99	50.000
ENSNBRG00000010987	-	79	48.421	ENSNBRG00000008223	-	89	33.623
ENSNBRG00000010987	-	86	41.892	ENSNBRG00000021375	-	69	41.892
ENSNBRG00000010987	-	93	33.824	ENSNBRG00000024293	-	92	34.328
ENSNBRG00000010987	-	73	32.979	ENSNBRG00000008827	znf319b	90	32.287
ENSNBRG00000010987	-	79	34.516	ENSNBRG00000024051	-	50	32.117
ENSNBRG00000010987	-	87	40.000	ENSNBRG00000000321	-	98	46.429
ENSNBRG00000010987	-	79	33.143	ENSNBRG00000004976	prdm5	84	33.333
ENSNBRG00000010987	-	90	41.379	ENSNBRG00000015873	-	98	47.191
ENSNBRG00000010987	-	76	50.000	ENSNBRG00000006125	-	90	50.000
ENSNBRG00000010987	-	81	45.536	ENSNBRG00000002542	-	94	38.172
ENSNBRG00000010987	-	72	32.938	ENSNBRG00000015442	ZNF319	87	33.007
ENSNBRG00000010987	-	90	31.517	ENSNBRG00000021967	-	71	31.517
ENSNBRG00000010987	-	87	30.790	ENSNBRG00000004557	-	96	30.790
ENSNBRG00000010987	-	80	31.880	ENSNBRG00000016564	-	86	31.880
ENSNBRG00000010987	-	87	35.979	ENSNBRG00000021960	zbtb17	79	35.979
ENSNBRG00000010987	-	77	36.752	ENSNBRG00000001834	-	100	39.785
ENSNBRG00000010987	-	75	32.836	ENSNBRG00000002946	-	95	32.836
ENSNBRG00000010987	-	73	48.780	ENSNBRG00000010194	-	68	42.000
ENSNBRG00000010987	-	72	36.250	ENSNBRG00000024020	-	61	36.250
ENSNBRG00000010987	-	77	34.682	ENSNBRG00000024294	-	79	37.584
ENSNBRG00000010987	-	73	34.392	ENSNBRG00000006445	-	52	40.637
ENSNBRG00000010987	-	77	44.318	ENSNBRG00000010351	-	94	44.318
ENSNBRG00000010987	-	94	43.396	ENSNBRG00000014088	-	98	47.887
ENSNBRG00000010987	-	76	40.741	ENSNBRG00000005849	-	90	37.374
ENSNBRG00000010987	-	79	35.780	ENSNBRG00000008106	-	93	40.719
ENSNBRG00000010987	-	79	32.441	ENSNBRG00000009811	-	87	33.716
ENSNBRG00000010987	-	74	48.387	ENSNBRG00000006411	-	87	50.000
ENSNBRG00000010987	-	73	42.857	ENSNBRG00000000305	-	78	43.299
ENSNBRG00000010987	-	76	38.462	ENSNBRG00000005796	-	99	32.234
ENSNBRG00000010987	-	82	33.750	ENSNBRG00000021237	-	93	34.061
ENSNBRG00000010987	-	77	49.296	ENSNBRG00000024344	-	85	41.429
ENSNBRG00000010987	-	90	43.226	ENSNBRG00000001761	-	52	43.226
ENSNBRG00000010987	-	74	38.776	ENSNBRG00000024054	-	64	38.776
ENSNBRG00000010987	-	72	39.860	ENSNBRG00000016582	-	85	39.860
ENSNBRG00000010987	-	86	46.226	ENSNBRG00000021247	-	62	46.226
ENSNBRG00000010987	-	81	34.715	ENSNBRG00000009279	-	95	37.647
ENSNBRG00000010987	-	86	41.748	ENSNBRG00000001813	-	78	41.748
ENSNBRG00000010987	-	81	43.038	ENSNBRG00000009075	znf236	78	43.038
ENSNBRG00000010987	-	77	43.529	ENSNBRG00000004723	-	95	43.529
ENSNBRG00000010987	-	89	39.910	ENSNBRG00000015652	-	99	43.023
ENSNBRG00000010987	-	86	39.259	ENSNBRG00000016639	-	57	39.259
ENSNBRG00000010987	-	65	34.028	ENSNBRG00000014403	-	64	34.028
ENSNBRG00000010987	-	73	36.290	ENSNBRG00000024046	-	56	37.052
ENSNBRG00000010987	-	74	37.838	ENSNBRG00000020830	-	52	33.908
ENSNBRG00000010987	-	77	33.828	ENSNBRG00000024345	-	94	33.828
ENSNBRG00000010987	-	73	40.777	ENSNBRG00000016219	-	97	40.777
ENSNBRG00000010987	-	73	48.352	ENSNBRG00000002902	-	98	45.361
ENSNBRG00000010987	-	91	39.768	ENSNBRG00000001163	-	96	39.683
ENSNBRG00000010987	-	86	36.098	ENSNBRG00000016666	-	97	40.244
ENSNBRG00000010987	-	95	48.148	ENSNBRG00000006757	-	79	43.878
ENSNBRG00000010987	-	73	38.255	ENSNBRG00000016550	-	90	38.356
ENSNBRG00000010987	-	86	33.628	ENSNBRG00000005823	-	95	37.209
ENSNBRG00000010987	-	86	36.752	ENSNBRG00000019881	-	55	36.752
ENSNBRG00000010987	-	92	40.805	ENSNBRG00000023960	-	85	30.667
ENSNBRG00000010987	-	75	44.048	ENSNBRG00000024014	-	74	38.645
ENSNBRG00000010987	-	74	52.874	ENSNBRG00000024019	-	85	53.750
ENSNBRG00000010987	-	80	43.750	ENSNBRG00000021998	-	70	43.548
ENSNBRG00000010987	-	77	32.362	ENSNBRG00000004523	-	93	36.932
ENSNBRG00000010987	-	72	45.833	ENSNBRG00000004381	-	75	45.588
ENSNBRG00000010987	-	77	39.153	ENSNBRG00000003250	-	95	39.583
ENSNBRG00000010987	-	77	46.602	ENSNBRG00000000492	-	74	38.854
ENSNBRG00000010987	-	75	39.655	ENSNBRG00000005175	zbtb41	75	31.282
ENSNBRG00000010987	-	74	47.917	ENSNBRG00000013583	-	91	47.917
ENSNBRG00000010987	-	74	35.556	ENSNBRG00000007276	-	60	42.391
ENSNBRG00000010987	-	88	46.753	ENSNBRG00000006112	-	70	46.809
ENSNBRG00000010987	-	73	40.152	ENSNBRG00000013983	scrt1b	53	40.152
ENSNBRG00000010987	-	82	32.973	ENSNBRG00000019481	-	90	40.000
ENSNBRG00000010987	-	73	30.216	ENSNBRG00000020034	znf652	53	32.143
ENSNBRG00000010987	-	88	44.286	ENSNBRG00000013501	-	99	40.609
ENSNBRG00000010987	-	72	40.000	ENSNBRG00000012376	-	98	40.000
ENSNBRG00000010987	-	94	47.899	ENSNBRG00000016282	-	97	47.899
ENSNBRG00000010987	-	76	43.182	ENSNBRG00000000708	-	88	43.182
ENSNBRG00000010987	-	74	38.889	ENSNBRG00000001641	-	88	37.815
ENSNBRG00000010987	-	74	33.333	ENSNBRG00000000292	znf710b	50	33.333
ENSNBRG00000010987	-	90	35.587	ENSNBRG00000024066	-	97	40.331
ENSNBRG00000010987	-	91	35.099	ENSNBRG00000018141	-	68	34.722
ENSNBRG00000010987	-	74	38.624	ENSNBRG00000021355	-	89	38.624
ENSNBRG00000010987	-	92	45.455	ENSNBRG00000007311	-	89	45.455
ENSNBRG00000010987	-	88	41.259	ENSNBRG00000013604	-	80	36.538
ENSNBRG00000010987	-	77	32.343	ENSNBRG00000008123	-	83	31.234
ENSNBRG00000010987	-	74	41.765	ENSNBRG00000022241	-	89	42.373
ENSNBRG00000010987	-	72	33.186	ENSNBRG00000013838	-	51	33.186
ENSNBRG00000010987	-	78	51.613	ENSNBRG00000023956	-	57	51.613
ENSNBRG00000010987	-	73	36.686	ENSNBRG00000016234	-	76	36.686
ENSNBRG00000010987	-	75	42.000	ENSNBRG00000009128	-	85	32.701
ENSNBRG00000010987	-	75	52.830	ENSNBRG00000024354	-	93	52.830
ENSNBRG00000010987	-	77	35.714	ENSNBRG00000018718	zbtb47b	69	40.230
ENSNBRG00000010987	-	72	47.126	ENSNBRG00000019770	-	88	47.126
ENSNBRG00000010987	-	77	41.358	ENSNBRG00000007384	-	53	41.294
ENSNBRG00000010987	-	88	43.275	ENSNBRG00000019004	-	83	43.275
ENSNBRG00000010987	-	88	32.155	ENSNBRG00000004822	-	67	32.155
ENSNBRG00000010987	-	79	51.220	ENSNBRG00000016603	-	96	51.220
ENSNBRG00000010987	-	73	43.373	ENSNBRG00000012391	gfi1b	52	43.373
ENSNBRG00000010987	-	94	32.803	ENSNBRG00000016577	si:dkey-182i3.9	94	34.132
ENSNBRG00000010987	-	82	33.540	ENSNBRG00000001608	-	98	31.476
ENSNBRG00000010987	-	73	39.806	ENSNBRG00000005805	-	95	39.806
ENSNBRG00000010987	-	74	40.523	ENSNBRG00000004792	-	62	35.417
ENSNBRG00000010987	-	79	43.195	ENSNBRG00000010405	-	84	53.623
ENSNBRG00000010987	-	90	46.980	ENSNBRG00000000960	-	95	48.515
ENSNBRG00000010987	-	72	36.429	ENSNBRG00000007221	scrt2	52	36.429
ENSNBRG00000010987	-	82	42.771	ENSNBRG00000002673	gfi1aa	50	42.771
ENSNBRG00000010987	-	73	35.922	ENSNBRG00000009815	-	92	31.532
ENSNBRG00000010987	-	83	46.154	ENSNBRG00000023229	-	94	46.154
ENSNBRG00000010987	-	85	33.068	ENSNBRG00000019987	GZF1	50	33.068
ENSNBRG00000010987	-	77	50.000	ENSNBRG00000007602	-	98	32.302
ENSNBRG00000010987	-	73	46.296	ENSNBRG00000024179	-	64	43.056
ENSNBRG00000010987	-	88	39.161	ENSNBRG00000000577	-	93	39.161
ENSNBRG00000010987	-	76	53.333	ENSNBRG00000003000	-	80	53.333
ENSNBRG00000010987	-	89	48.387	ENSNBRG00000003124	-	99	48.485
ENSNBRG00000010987	-	72	42.604	ENSNBRG00000024048	-	94	38.889
ENSNBRG00000010987	-	82	34.524	ENSNBRG00000011785	snai2	80	34.524

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000010987	-	100	84.926	ENSAPOG00000003028	-	96	76.443	Acanthochromis_polyacanthus
ENSNBRG00000010987	-	100	84.118	ENSATEG00000023044	-	93	84.118	Anabas_testudineus
ENSNBRG00000010987	-	100	97.841	ENSACLG00000016841	-	84	97.841	Astatotilapia_calliptera
ENSNBRG00000010987	-	100	77.328	ENSCSEG00000004721	-	84	78.138	Cynoglossus_semilaevis
ENSNBRG00000010987	-	100	75.201	ENSFHEG00000003583	-	92	75.201	Fundulus_heteroclitus
ENSNBRG00000010987	-	81	31.733	ENSKMAG00000003402	-	56	31.733	Kryptolebias_marmoratus
ENSNBRG00000010987	-	100	84.253	ENSMAMG00000015670	-	84	84.253	Mastacembelus_armatus
ENSNBRG00000010987	-	100	97.841	ENSMZEG00005001313	-	84	97.841	Maylandia_zebra
ENSNBRG00000010987	-	76	34.139	ENSMMOG00000020682	-	65	34.769	Mola_mola
ENSNBRG00000010987	-	97	78.620	ENSMALG00000011860	-	74	78.620	Monopterus_albus
ENSNBRG00000010987	-	76	78.637	ENSONIG00000017799	-	99	78.637	Oreochromis_niloticus
ENSNBRG00000010987	-	100	76.518	ENSORLG00000027418	-	84	76.518	Oryzias_latipes
ENSNBRG00000010987	-	100	76.653	ENSORLG00020008744	-	85	76.653	Oryzias_latipes_hni
ENSNBRG00000010987	-	100	76.518	ENSORLG00015007973	-	84	76.518	Oryzias_latipes_hsok
ENSNBRG00000010987	-	100	78.273	ENSOMEG00000003451	-	78	78.273	Oryzias_melastigma
ENSNBRG00000010987	-	100	77.598	ENSPREG00000007135	-	85	77.598	Poecilia_reticulata
ENSNBRG00000010987	-	100	30.599	ENSSMAG00000002031	-	90	30.599	Scophthalmus_maximus
ENSNBRG00000010987	-	100	81.745	ENSSMAG00000005081	-	90	81.745	Scophthalmus_maximus
ENSNBRG00000010987	-	100	85.984	ENSSDUG00000016734	-	84	85.984	Seriola_dumerili
ENSNBRG00000010987	-	100	85.849	ENSSLDG00000004485	-	84	85.849	Seriola_lalandi_dorsalis
ENSNBRG00000010987	-	100	86.810	ENSSPAG00000003796	-	84	86.810	Stegastes_partitus
ENSNBRG00000010987	-	100	77.868	ENSTRUG00000025881	-	84	77.868	Takifugu_rubripes
ENSNBRG00000010987	-	100	56.136	ENSXMAG00000024762	-	84	56.136	Xiphophorus_maculatus