EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000011084 (Gene tree)
Gene ID: -
Gene Symbol: rbfox1
Alias: a2bp1|zgc:103635
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 75345 bases
Position: chrJH422465.1:161768-237112
Accession: ZDB-GENE-040927-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000014363	Fox-1_C	PF12414.8	1.9e-25	1	1
ENSNBRP00000014363	RRM_1	PF00076.22	4.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000014753	-	1260	-	ENSNBRP00000014363	419 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000011084's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000011084's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000011084	rbfox1	67	50.680	ENSNBRG00000018155	rbfox2	57	50.336
ENSNBRG00000011084	rbfox1	85	51.105	ENSNBRG00000010102	rbfox3b	89	51.105
ENSNBRG00000011084	rbfox1	92	48.346	ENSNBRG00000022885	-	99	49.873
ENSNBRG00000011084	rbfox1	67	51.064	ENSNBRG00000003346	rbfox1l	91	41.787

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000011084	rbfox1	98	61.429	ENSG00000078328	RBFOX1	100	61.429	Homo_sapiens
ENSNBRG00000011084	rbfox1	95	70.098	ENSAPOG00000003197	rbfox1	98	70.443	Acanthochromis_polyacanthus
ENSNBRG00000011084	rbfox1	54	61.638	ENSAMEG00000008605	RBFOX1	85	61.638	Ailuropoda_melanoleuca
ENSNBRG00000011084	rbfox1	64	59.655	ENSACIG00000005478	rbfox1	70	59.655	Amphilophus_citrinellus
ENSNBRG00000011084	rbfox1	66	70.070	ENSAOCG00000008283	rbfox1	97	70.034	Amphiprion_ocellaris
ENSNBRG00000011084	rbfox1	91	61.168	ENSAPEG00000010636	rbfox1	100	62.532	Amphiprion_percula
ENSNBRG00000011084	rbfox1	66	69.580	ENSATEG00000007513	rbfox1	97	68.667	Anabas_testudineus
ENSNBRG00000011084	rbfox1	94	61.446	ENSAPLG00000013263	RBFOX1	98	61.446	Anas_platyrhynchos
ENSNBRG00000011084	rbfox1	94	60.964	ENSACAG00000004013	RBFOX1	98	60.964	Anolis_carolinensis
ENSNBRG00000011084	rbfox1	98	61.429	ENSANAG00000029527	RBFOX1	100	61.429	Aotus_nancymaae
ENSNBRG00000011084	rbfox1	51	65.899	ENSAMXG00000002431	rbfox1	59	67.130	Astyanax_mexicanus
ENSNBRG00000011084	rbfox1	95	60.145	ENSBTAG00000007210	RBFOX1	98	60.145	Bos_taurus
ENSNBRG00000011084	rbfox1	98	61.631	ENSCJAG00000017351	RBFOX1	96	61.631	Callithrix_jacchus
ENSNBRG00000011084	rbfox1	98	60.000	ENSCAFG00000019082	RBFOX1	96	60.000	Canis_familiaris
ENSNBRG00000011084	rbfox1	68	56.811	ENSCAFG00020024881	RBFOX1	83	55.873	Canis_lupus_dingo
ENSNBRG00000011084	rbfox1	95	59.903	ENSCHIG00000023549	RBFOX1	98	59.903	Capra_hircus
ENSNBRG00000011084	rbfox1	94	62.750	ENSTSYG00000005334	RBFOX1	99	62.907	Carlito_syrichta
ENSNBRG00000011084	rbfox1	94	61.259	ENSCAPG00000017669	RBFOX1	99	61.165	Cavia_aperea
ENSNBRG00000011084	rbfox1	94	61.259	ENSCPOG00000011314	RBFOX1	99	60.723	Cavia_porcellus
ENSNBRG00000011084	rbfox1	98	61.429	ENSCCAG00000023031	RBFOX1	100	61.429	Cebus_capucinus
ENSNBRG00000011084	rbfox1	98	61.429	ENSCATG00000033816	RBFOX1	100	61.429	Cercocebus_atys
ENSNBRG00000011084	rbfox1	94	61.017	ENSCLAG00000012761	RBFOX1	98	60.482	Chinchilla_lanigera
ENSNBRG00000011084	rbfox1	83	55.526	ENSCSAG00000008739	RBFOX1	92	55.526	Chlorocebus_sabaeus
ENSNBRG00000011084	rbfox1	69	81.538	ENSCHOG00000012843	RBFOX1	68	81.538	Choloepus_hoffmanni
ENSNBRG00000011084	rbfox1	95	63.119	ENSCPBG00000026626	RBFOX1	98	60.628	Chrysemys_picta_bellii
ENSNBRG00000011084	rbfox1	98	61.429	ENSCANG00000033125	RBFOX1	100	61.429	Colobus_angolensis_palliatus
ENSNBRG00000011084	rbfox1	98	59.070	ENSCGRG00001013729	Rbfox1	98	60.241	Cricetulus_griseus_chok1gshd
ENSNBRG00000011084	rbfox1	98	59.070	ENSCGRG00000003272	Rbfox1	98	60.241	Cricetulus_griseus_crigri
ENSNBRG00000011084	rbfox1	91	66.751	ENSCSEG00000008840	rbfox1	100	66.244	Cynoglossus_semilaevis
ENSNBRG00000011084	rbfox1	94	62.935	ENSDARG00000014746	rbfox1	99	62.438	Danio_rerio
ENSNBRG00000011084	rbfox1	98	59.584	ENSDNOG00000043612	RBFOX1	96	59.584	Dasypus_novemcinctus
ENSNBRG00000011084	rbfox1	94	60.386	ENSDORG00000010024	Rbfox1	97	61.111	Dipodomys_ordii
ENSNBRG00000011084	rbfox1	98	50.701	ENSETEG00000003771	RBFOX1	96	50.701	Echinops_telfairi
ENSNBRG00000011084	rbfox1	95	62.129	ENSEASG00005011599	RBFOX1	98	60.628	Equus_asinus_asinus
ENSNBRG00000011084	rbfox1	95	62.129	ENSECAG00000012667	RBFOX1	94	58.993	Equus_caballus
ENSNBRG00000011084	rbfox1	79	58.475	ENSELUG00000013096	rbfox1	96	58.898	Esox_lucius
ENSNBRG00000011084	rbfox1	95	62.871	ENSFCAG00000025322	RBFOX1	89	62.871	Felis_catus
ENSNBRG00000011084	rbfox1	78	57.184	ENSFALG00000004027	RBFOX1	97	57.184	Ficedula_albicollis
ENSNBRG00000011084	rbfox1	94	61.017	ENSFDAG00000007388	RBFOX1	98	60.482	Fukomys_damarensis
ENSNBRG00000011084	rbfox1	98	60.140	ENSGALG00000034325	RBFOX1	96	60.140	Gallus_gallus
ENSNBRG00000011084	rbfox1	97	61.005	ENSGAGG00000023681	RBFOX1	100	61.347	Gopherus_agassizii
ENSNBRG00000011084	rbfox1	98	61.429	ENSGGOG00000016871	-	100	61.429	Gorilla_gorilla
ENSNBRG00000011084	rbfox1	94	61.017	ENSHGLG00000016944	RBFOX1	98	60.482	Heterocephalus_glaber_female
ENSNBRG00000011084	rbfox1	94	61.017	ENSHGLG00100003272	RBFOX1	98	60.482	Heterocephalus_glaber_male
ENSNBRG00000011084	rbfox1	81	64.183	ENSHCOG00000016419	rbfox1	91	63.610	Hippocampus_comes
ENSNBRG00000011084	rbfox1	93	61.111	ENSIPUG00000015215	rbfox1	100	62.532	Ictalurus_punctatus
ENSNBRG00000011084	rbfox1	98	59.302	ENSSTOG00000000322	RBFOX1	99	59.518	Ictidomys_tridecemlineatus
ENSNBRG00000011084	rbfox1	98	58.605	ENSJJAG00000002575	Rbfox1	98	59.518	Jaculus_jaculus
ENSNBRG00000011084	rbfox1	94	66.423	ENSLBEG00000014659	rbfox1	98	69.036	Labrus_bergylta
ENSNBRG00000011084	rbfox1	95	60.952	ENSLOCG00000006675	rbfox1	99	60.952	Lepisosteus_oculatus
ENSNBRG00000011084	rbfox1	71	66.032	ENSLAFG00000011480	RBFOX1	100	66.032	Loxodonta_africana
ENSNBRG00000011084	rbfox1	98	61.429	ENSMFAG00000036447	RBFOX1	100	61.429	Macaca_fascicularis
ENSNBRG00000011084	rbfox1	98	61.429	ENSMMUG00000003458	RBFOX1	100	61.429	Macaca_mulatta
ENSNBRG00000011084	rbfox1	98	59.535	ENSMNEG00000032034	RBFOX1	96	59.535	Macaca_nemestrina
ENSNBRG00000011084	rbfox1	98	61.429	ENSMLEG00000015382	RBFOX1	100	61.429	Mandrillus_leucophaeus
ENSNBRG00000011084	rbfox1	91	66.923	ENSMAMG00000003142	rbfox1	100	68.462	Mastacembelus_armatus
ENSNBRG00000011084	rbfox1	67	58.784	ENSMGAG00000008606	RBFOX1	97	58.784	Meleagris_gallopavo
ENSNBRG00000011084	rbfox1	92	38.889	ENSMAUG00000020570	Rbfox1	95	38.228	Mesocricetus_auratus
ENSNBRG00000011084	rbfox1	98	61.429	ENSMICG00000034286	RBFOX1	100	61.429	Microcebus_murinus
ENSNBRG00000011084	rbfox1	98	59.302	ENSMOCG00000020932	Rbfox1	99	61.179	Microtus_ochrogaster
ENSNBRG00000011084	rbfox1	81	62.899	ENSMMOG00000009716	rbfox1	86	62.899	Mola_mola
ENSNBRG00000011084	rbfox1	79	56.497	ENSMODG00000005826	RBFOX1	94	56.497	Monodelphis_domestica
ENSNBRG00000011084	rbfox1	95	69.727	ENSMALG00000003337	rbfox1	98	69.576	Monopterus_albus
ENSNBRG00000011084	rbfox1	98	59.302	MGP_CAROLIEiJ_G0020427	Rbfox1	98	60.482	Mus_caroli
ENSNBRG00000011084	rbfox1	98	59.070	ENSMUSG00000008658	Rbfox1	99	68.345	Mus_musculus
ENSNBRG00000011084	rbfox1	98	59.302	MGP_PahariEiJ_G0016135	Rbfox1	98	60.482	Mus_pahari
ENSNBRG00000011084	rbfox1	98	58.837	MGP_SPRETEiJ_G0021321	Rbfox1	98	60.000	Mus_spretus
ENSNBRG00000011084	rbfox1	87	54.522	ENSMPUG00000014822	RBFOX1	90	54.522	Mustela_putorius_furo
ENSNBRG00000011084	rbfox1	71	66.038	ENSMLUG00000015896	RBFOX1	100	66.038	Myotis_lucifugus
ENSNBRG00000011084	rbfox1	98	58.837	ENSNGAG00000023276	Rbfox1	99	60.437	Nannospalax_galili
ENSNBRG00000011084	rbfox1	98	61.190	ENSNLEG00000010017	-	100	61.190	Nomascus_leucogenys
ENSNBRG00000011084	rbfox1	66	84.615	ENSMEUG00000012525	RBFOX1	64	84.615	Notamacropus_eugenii
ENSNBRG00000011084	rbfox1	64	92.500	ENSOPRG00000006199	-	72	62.661	Ochotona_princeps
ENSNBRG00000011084	rbfox1	94	61.259	ENSODEG00000013166	RBFOX1	98	60.870	Octodon_degus
ENSNBRG00000011084	rbfox1	83	54.987	ENSOANG00000002379	RBFOX1	92	54.987	Ornithorhynchus_anatinus
ENSNBRG00000011084	rbfox1	50	63.256	ENSOCUG00000001205	-	89	63.256	Oryctolagus_cuniculus
ENSNBRG00000011084	rbfox1	95	60.143	ENSOGAG00000025535	RBFOX1	99	60.143	Otolemur_garnettii
ENSNBRG00000011084	rbfox1	50	53.521	ENSOARG00000005135	RBFOX1	77	53.521	Ovis_aries
ENSNBRG00000011084	rbfox1	94	62.750	ENSPPAG00000036238	-	99	62.907	Pan_paniscus
ENSNBRG00000011084	rbfox1	98	61.667	ENSPPRG00000006546	RBFOX1	100	61.667	Panthera_pardus
ENSNBRG00000011084	rbfox1	95	54.415	ENSPTIG00000021154	RBFOX1	100	54.177	Panthera_tigris_altaica
ENSNBRG00000011084	rbfox1	98	61.429	ENSPTRG00000007744	RBFOX1	100	61.429	Pan_troglodytes
ENSNBRG00000011084	rbfox1	98	61.429	ENSPANG00000026500	RBFOX1	100	61.429	Papio_anubis
ENSNBRG00000011084	rbfox1	66	62.143	ENSPKIG00000019353	rbfox1	86	61.512	Paramormyrops_kingsleyae
ENSNBRG00000011084	rbfox1	94	62.095	ENSPKIG00000009667	-	95	62.234	Paramormyrops_kingsleyae
ENSNBRG00000011084	rbfox1	95	60.911	ENSPSIG00000006523	RBFOX1	98	60.911	Pelodiscus_sinensis
ENSNBRG00000011084	rbfox1	98	59.302	ENSPEMG00000017607	Rbfox1	98	60.482	Peromyscus_maniculatus_bairdii
ENSNBRG00000011084	rbfox1	68	67.450	ENSPCIG00000026887	RBFOX1	100	67.450	Phascolarctos_cinereus
ENSNBRG00000011084	rbfox1	87	54.780	ENSPPYG00000007079	-	90	54.780	Pongo_abelii
ENSNBRG00000011084	rbfox1	89	52.835	ENSPCAG00000002630	RBFOX1	96	52.835	Procavia_capensis
ENSNBRG00000011084	rbfox1	98	61.429	ENSPCOG00000025687	RBFOX1	100	61.429	Propithecus_coquereli
ENSNBRG00000011084	rbfox1	98	57.209	ENSPVAG00000013467	RBFOX1	96	57.209	Pteropus_vampyrus
ENSNBRG00000011084	rbfox1	91	60.837	ENSPNAG00000023109	rbfox1	100	61.179	Pygocentrus_nattereri
ENSNBRG00000011084	rbfox1	94	60.577	ENSRNOG00000002827	Rbfox1	94	60.577	Rattus_norvegicus
ENSNBRG00000011084	rbfox1	94	62.750	ENSRBIG00000044478	RBFOX1	99	62.907	Rhinopithecus_bieti
ENSNBRG00000011084	rbfox1	98	61.429	ENSRROG00000044411	RBFOX1	100	61.429	Rhinopithecus_roxellana
ENSNBRG00000011084	rbfox1	98	61.667	ENSSBOG00000033726	RBFOX1	100	61.667	Saimiri_boliviensis_boliviensis
ENSNBRG00000011084	rbfox1	94	61.259	ENSSHAG00000009257	RBFOX1	97	61.557	Sarcophilus_harrisii
ENSNBRG00000011084	rbfox1	86	53.908	ENSSFOG00015009955	-	85	54.447	Scleropages_formosus
ENSNBRG00000011084	rbfox1	74	69.643	ENSSFOG00015023675	rbfox1	91	69.643	Scleropages_formosus
ENSNBRG00000011084	rbfox1	95	69.779	ENSSMAG00000015505	rbfox1	93	70.025	Scophthalmus_maximus
ENSNBRG00000011084	rbfox1	95	68.238	ENSSDUG00000016413	rbfox1	100	68.238	Seriola_dumerili
ENSNBRG00000011084	rbfox1	81	65.507	ENSSLDG00000009353	rbfox1	97	67.492	Seriola_lalandi_dorsalis
ENSNBRG00000011084	rbfox1	81	60.116	ENSSPUG00000009732	RBFOX1	87	60.116	Sphenodon_punctatus
ENSNBRG00000011084	rbfox1	93	69.652	ENSSPAG00000009723	rbfox1	99	70.149	Stegastes_partitus
ENSNBRG00000011084	rbfox1	95	58.810	ENSSSCG00000007917	RBFOX1	94	58.810	Sus_scrofa
ENSNBRG00000011084	rbfox1	94	61.353	ENSTGUG00000004562	RBFOX1	100	61.353	Taeniopygia_guttata
ENSNBRG00000011084	rbfox1	94	68.734	ENSTRUG00000020940	rbfox1	100	67.734	Takifugu_rubripes
ENSNBRG00000011084	rbfox1	61	50.847	ENSTNIG00000002567	rbfox1	98	49.831	Tetraodon_nigroviridis
ENSNBRG00000011084	rbfox1	98	59.302	ENSTTRG00000005700	RBFOX1	96	59.302	Tursiops_truncatus
ENSNBRG00000011084	rbfox1	94	58.495	ENSUAMG00000024633	RBFOX1	100	62.113	Ursus_americanus
ENSNBRG00000011084	rbfox1	94	55.583	ENSUMAG00000003579	RBFOX1	99	55.583	Ursus_maritimus
ENSNBRG00000011084	rbfox1	71	66.667	ENSVPAG00000001284	RBFOX1	74	65.714	Vicugna_pacos
ENSNBRG00000011084	rbfox1	95	62.871	ENSVVUG00000017311	RBFOX1	71	81.609	Vulpes_vulpes