EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000011270 (Gene tree)
Gene ID: -
Gene Symbol: fam83fa
Alias: -
Full Name: family with sequence similarity 83%2C member Fa
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 19298 bases
Position: chrJH422358.1:2509235-2528532
Accession: ZDB-GENE-090624-5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000014587	FAM83	PF07894.12	3.8e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000014981	-	966	-	ENSNBRP00000014587	321 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000011270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000011270's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000011270	fam83fa	95	58.900	ENSNBRG00000011999	fam83fb	79	66.165

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000011270	fam83fa	86	65.704	ENSAPOG00000013954	fam83fb	53	65.704	Acanthochromis_polyacanthus
ENSNBRG00000011270	fam83fa	91	87.671	ENSAPOG00000002100	fam83fa	55	87.671	Acanthochromis_polyacanthus
ENSNBRG00000011270	fam83fa	69	55.605	ENSAPOG00000018240	-	75	55.111	Acanthochromis_polyacanthus
ENSNBRG00000011270	fam83fa	91	91.468	ENSACIG00000013934	fam83fa	55	91.468	Amphilophus_citrinellus
ENSNBRG00000011270	fam83fa	84	65.441	ENSACIG00000018205	fam83fb	84	65.441	Amphilophus_citrinellus
ENSNBRG00000011270	fam83fa	91	88.014	ENSAOCG00000001182	fam83fa	55	88.014	Amphiprion_ocellaris
ENSNBRG00000011270	fam83fa	85	66.058	ENSAOCG00000011974	fam83fb	53	66.058	Amphiprion_ocellaris
ENSNBRG00000011270	fam83fa	91	89.041	ENSAPEG00000020202	fam83fa	55	89.041	Amphiprion_percula
ENSNBRG00000011270	fam83fa	85	66.058	ENSAPEG00000008303	fam83fb	53	66.058	Amphiprion_percula
ENSNBRG00000011270	fam83fa	90	85.862	ENSATEG00000020738	fam83fa	54	85.862	Anabas_testudineus
ENSNBRG00000011270	fam83fa	82	65.789	ENSACLG00000008136	fam83fb	52	65.789	Astatotilapia_calliptera
ENSNBRG00000011270	fam83fa	91	97.952	ENSACLG00000021073	fam83fa	55	97.952	Astatotilapia_calliptera
ENSNBRG00000011270	fam83fa	90	76.632	ENSCSEG00000020530	fam83fa	67	72.852	Cynoglossus_semilaevis
ENSNBRG00000011270	fam83fa	86	65.950	ENSCSEG00000001431	fam83fb	54	65.950	Cynoglossus_semilaevis
ENSNBRG00000011270	fam83fa	91	87.671	ENSCVAG00000002014	fam83fa	55	87.671	Cyprinodon_variegatus
ENSNBRG00000011270	fam83fa	82	66.917	ENSCVAG00000011517	fam83fb	52	66.917	Cyprinodon_variegatus
ENSNBRG00000011270	fam83fa	84	74.074	ENSDARG00000038012	fam83fa	54	73.585	Danio_rerio
ENSNBRG00000011270	fam83fa	82	62.500	ENSDARG00000104188	fam83fb	75	61.417	Danio_rerio
ENSNBRG00000011270	fam83fa	83	69.288	ENSELUG00000020195	fam83fb	52	69.288	Esox_lucius
ENSNBRG00000011270	fam83fa	82	67.170	ENSFHEG00000008722	fam83fb	68	67.170	Fundulus_heteroclitus
ENSNBRG00000011270	fam83fa	87	85.357	ENSFHEG00000015048	fam83fa	53	85.357	Fundulus_heteroclitus
ENSNBRG00000011270	fam83fa	83	65.428	ENSGAFG00000011468	fam83fb	52	65.428	Gambusia_affinis
ENSNBRG00000011270	fam83fa	88	82.394	ENSGAFG00000016700	fam83fa	54	82.394	Gambusia_affinis
ENSNBRG00000011270	fam83fa	82	66.165	ENSHBUG00000009368	fam83fb	52	66.165	Haplochromis_burtoni
ENSNBRG00000011270	fam83fa	91	97.952	ENSHBUG00000017286	fam83fa	55	97.952	Haplochromis_burtoni
ENSNBRG00000011270	fam83fa	82	65.530	ENSHCOG00000009657	fam83fb	52	65.530	Hippocampus_comes
ENSNBRG00000011270	fam83fa	91	85.274	ENSKMAG00000007053	fam83fa	52	85.274	Kryptolebias_marmoratus
ENSNBRG00000011270	fam83fa	91	62.838	ENSKMAG00000011443	fam83fb	58	62.838	Kryptolebias_marmoratus
ENSNBRG00000011270	fam83fa	88	83.039	ENSLBEG00000005198	fam83fa	54	83.039	Labrus_bergylta
ENSNBRG00000011270	fam83fa	85	62.816	ENSLBEG00000011997	fam83fb	53	62.816	Labrus_bergylta
ENSNBRG00000011270	fam83fa	90	85.517	ENSMAMG00000020194	fam83fa	54	85.517	Mastacembelus_armatus
ENSNBRG00000011270	fam83fa	85	65.328	ENSMAMG00000004682	fam83fb	54	65.328	Mastacembelus_armatus
ENSNBRG00000011270	fam83fa	91	97.952	ENSMZEG00005023302	fam83fa	55	97.952	Maylandia_zebra
ENSNBRG00000011270	fam83fa	82	65.789	ENSMZEG00005019183	fam83fb	52	65.789	Maylandia_zebra
ENSNBRG00000011270	fam83fa	85	63.538	ENSMMOG00000011136	fam83fb	84	63.538	Mola_mola
ENSNBRG00000011270	fam83fa	87	81.786	ENSMMOG00000021541	fam83fa	78	81.786	Mola_mola
ENSNBRG00000011270	fam83fa	89	83.566	ENSMALG00000019513	fam83fa	55	83.566	Monopterus_albus
ENSNBRG00000011270	fam83fa	84	62.637	ENSMALG00000015816	fam83fb	61	62.100	Monopterus_albus
ENSNBRG00000011270	fam83fa	91	97.270	ENSONIG00000009702	fam83fa	55	97.270	Oreochromis_niloticus
ENSNBRG00000011270	fam83fa	82	64.662	ENSONIG00000016936	fam83fb	100	64.662	Oreochromis_niloticus
ENSNBRG00000011270	fam83fa	84	65.074	ENSORLG00000010844	fam83fb	54	65.074	Oryzias_latipes
ENSNBRG00000011270	fam83fa	91	82.131	ENSORLG00000001401	fam83fa	55	82.131	Oryzias_latipes
ENSNBRG00000011270	fam83fa	84	65.441	ENSORLG00020007895	fam83fb	54	65.441	Oryzias_latipes_hni
ENSNBRG00000011270	fam83fa	91	81.787	ENSORLG00020013985	fam83fa	55	81.787	Oryzias_latipes_hni
ENSNBRG00000011270	fam83fa	84	65.074	ENSORLG00015007142	fam83fb	54	65.074	Oryzias_latipes_hsok
ENSNBRG00000011270	fam83fa	91	81.787	ENSORLG00015007009	fam83fa	55	81.787	Oryzias_latipes_hsok
ENSNBRG00000011270	fam83fa	91	84.247	ENSOMEG00000017221	fam83fa	55	84.247	Oryzias_melastigma
ENSNBRG00000011270	fam83fa	84	64.103	ENSOMEG00000015967	fam83fb	54	64.103	Oryzias_melastigma
ENSNBRG00000011270	fam83fa	84	67.159	ENSPKIG00000003519	fam83fa	53	67.159	Paramormyrops_kingsleyae
ENSNBRG00000011270	fam83fa	81	66.795	ENSPKIG00000013672	fam83fb	51	66.795	Paramormyrops_kingsleyae
ENSNBRG00000011270	fam83fa	91	74.830	ENSPMGG00000011794	fam83fa	50	74.830	Periophthalmus_magnuspinnatus
ENSNBRG00000011270	fam83fa	82	66.038	ENSPFOG00000014672	fam83fb	90	65.789	Poecilia_formosa
ENSNBRG00000011270	fam83fa	88	82.746	ENSPFOG00000007236	fam83fa	54	82.746	Poecilia_formosa
ENSNBRG00000011270	fam83fa	82	66.038	ENSPLAG00000002530	-	52	66.038	Poecilia_latipinna
ENSNBRG00000011270	fam83fa	88	82.746	ENSPLAG00000010997	fam83fa	54	82.746	Poecilia_latipinna
ENSNBRG00000011270	fam83fa	88	82.746	ENSPMEG00000018863	fam83fa	54	82.746	Poecilia_mexicana
ENSNBRG00000011270	fam83fa	82	66.038	ENSPMEG00000020267	fam83fb	52	66.038	Poecilia_mexicana
ENSNBRG00000011270	fam83fa	88	70.175	ENSPREG00000012779	fam83fa	81	71.429	Poecilia_reticulata
ENSNBRG00000011270	fam83fa	83	65.056	ENSPREG00000000170	fam83fb	53	65.056	Poecilia_reticulata
ENSNBRG00000011270	fam83fa	82	66.541	ENSPNYG00000015309	fam83fb	53	66.541	Pundamilia_nyererei
ENSNBRG00000011270	fam83fa	91	97.270	ENSPNYG00000011832	fam83fa	55	97.270	Pundamilia_nyererei
ENSNBRG00000011270	fam83fa	84	64.706	ENSPNAG00000024206	fam83fb	53	64.706	Pygocentrus_nattereri
ENSNBRG00000011270	fam83fa	85	70.956	ENSSFOG00015010079	fam83f	56	66.176	Scleropages_formosus
ENSNBRG00000011270	fam83fa	90	56.552	ENSSFOG00015023820	fam83fb	58	56.314	Scleropages_formosus
ENSNBRG00000011270	fam83fa	90	82.007	ENSSMAG00000013899	fam83fa	53	82.007	Scophthalmus_maximus
ENSNBRG00000011270	fam83fa	85	68.248	ENSSMAG00000021148	fam83fb	53	68.248	Scophthalmus_maximus
ENSNBRG00000011270	fam83fa	90	85.517	ENSSDUG00000023214	fam83fa	54	85.517	Seriola_dumerili
ENSNBRG00000011270	fam83fa	85	65.455	ENSSDUG00000012069	fam83fb	52	65.455	Seriola_dumerili
ENSNBRG00000011270	fam83fa	90	86.207	ENSSLDG00000006950	fam83fa	54	86.207	Seriola_lalandi_dorsalis
ENSNBRG00000011270	fam83fa	85	64.364	ENSSLDG00000020926	fam83fb	52	64.364	Seriola_lalandi_dorsalis
ENSNBRG00000011270	fam83fa	85	66.545	ENSSPAG00000004922	fam83fb	59	61.111	Stegastes_partitus
ENSNBRG00000011270	fam83fa	93	85.859	ENSSPAG00000004902	fam83fa	56	85.859	Stegastes_partitus
ENSNBRG00000011270	fam83fa	91	78.451	ENSTRUG00000024905	fam83fa	55	79.125	Takifugu_rubripes
ENSNBRG00000011270	fam83fa	83	77.455	ENSTNIG00000011260	fam83fa	90	78.182	Tetraodon_nigroviridis
ENSNBRG00000011270	fam83fa	85	58.974	ENSTNIG00000018819	fam83fb	63	58.974	Tetraodon_nigroviridis
ENSNBRG00000011270	fam83fa	83	64.312	ENSXCOG00000015914	fam83fb	54	64.312	Xiphophorus_couchianus
ENSNBRG00000011270	fam83fa	87	82.796	ENSXMAG00000024063	fam83fa	53	82.796	Xiphophorus_maculatus
ENSNBRG00000011270	fam83fa	83	65.056	ENSXMAG00000010041	fam83fb	54	65.056	Xiphophorus_maculatus