EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000011376 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA-binding Raly-like protein-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 60546 bases
Position: chrJH422308.1:177329-237874
Accession: 102800290
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000014715	RRM_1	PF00076.22	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000015118	-	882	XM_006794959	ENSNBRP00000014715	293 (aa)	XP_006795022	-

Gene Model

Click here to download ENSNBRG00000011376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000011376's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000011376	-	76	56.332	ENSNBRG00000015676	-	77	58.874
ENSNBRG00000011376	-	74	58.850	ENSNBRG00000004912	-	93	55.274
ENSNBRG00000011376	-	98	66.554	ENSNBRG00000011206	-	97	66.554
ENSNBRG00000011376	-	89	49.071	ENSNBRG00000014761	raly	96	46.535

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000011376	-	99	70.847	ENSAPOG00000008744	-	97	70.990	Acanthochromis_polyacanthus
ENSNBRG00000011376	-	98	65.878	ENSACIG00000007143	-	97	65.878	Amphilophus_citrinellus
ENSNBRG00000011376	-	99	70.847	ENSAOCG00000023599	-	98	70.847	Amphiprion_ocellaris
ENSNBRG00000011376	-	99	92.784	ENSAOCG00000001605	-	98	92.784	Amphiprion_ocellaris
ENSNBRG00000011376	-	99	65.789	ENSATEG00000022219	-	93	69.737	Anabas_testudineus
ENSNBRG00000011376	-	80	94.872	ENSATEG00000023356	-	90	94.872	Anabas_testudineus
ENSNBRG00000011376	-	99	71.088	ENSACLG00000011720	-	98	71.088	Astatotilapia_calliptera
ENSNBRG00000011376	-	100	99.659	ENSACLG00000006949	-	100	99.659	Astatotilapia_calliptera
ENSNBRG00000011376	-	93	65.568	ENSAMXG00000032617	-	97	62.245	Astyanax_mexicanus
ENSNBRG00000011376	-	99	85.567	ENSAMXG00000019031	-	98	85.567	Astyanax_mexicanus
ENSNBRG00000011376	-	99	65.424	ENSCSEG00000014237	-	98	65.085	Cynoglossus_semilaevis
ENSNBRG00000011376	-	99	70.169	ENSCVAG00000013624	-	98	70.169	Cyprinodon_variegatus
ENSNBRG00000011376	-	98	90.625	ENSCVAG00000018104	-	97	91.667	Cyprinodon_variegatus
ENSNBRG00000011376	-	58	76.608	ENSDARG00000090292	ralyl	81	78.395	Danio_rerio
ENSNBRG00000011376	-	97	72.917	ENSELUG00000001702	-	98	74.653	Esox_lucius
ENSNBRG00000011376	-	56	78.182	ENSGMOG00000005914	-	100	78.182	Gadus_morhua
ENSNBRG00000011376	-	59	93.642	ENSGACG00000004991	-	91	95.783	Gasterosteus_aculeatus
ENSNBRG00000011376	-	99	70.847	ENSHBUG00000010040	-	98	70.847	Haplochromis_burtoni
ENSNBRG00000011376	-	99	94.863	ENSHBUG00000015412	-	98	94.863	Haplochromis_burtoni
ENSNBRG00000011376	-	99	86.301	ENSIPUG00000000507	ralyl	98	86.301	Ictalurus_punctatus
ENSNBRG00000011376	-	99	91.753	ENSKMAG00000018155	-	98	91.753	Kryptolebias_marmoratus
ENSNBRG00000011376	-	99	68.136	ENSKMAG00000022093	-	98	69.831	Kryptolebias_marmoratus
ENSNBRG00000011376	-	99	89.384	ENSLBEG00000011011	-	98	89.726	Labrus_bergylta
ENSNBRG00000011376	-	98	72.260	ENSLBEG00000012873	-	98	70.847	Labrus_bergylta
ENSNBRG00000011376	-	99	80.756	ENSLOCG00000012787	ralyl	97	80.412	Lepisosteus_oculatus
ENSNBRG00000011376	-	98	69.310	ENSMAMG00000001723	-	95	69.310	Mastacembelus_armatus
ENSNBRG00000011376	-	99	71.088	ENSMZEG00005024447	-	98	71.088	Maylandia_zebra
ENSNBRG00000011376	-	100	99.659	ENSMZEG00005018748	-	100	99.659	Maylandia_zebra
ENSNBRG00000011376	-	98	65.902	ENSMMOG00000020441	-	86	66.557	Mola_mola
ENSNBRG00000011376	-	99	92.414	ENSMALG00000012952	-	98	91.753	Monopterus_albus
ENSNBRG00000011376	-	99	71.186	ENSMALG00000019019	-	77	71.186	Monopterus_albus
ENSNBRG00000011376	-	93	72.101	ENSORLG00000017934	-	97	69.521	Oryzias_latipes
ENSNBRG00000011376	-	98	94.425	ENSORLG00000012719	-	98	93.127	Oryzias_latipes
ENSNBRG00000011376	-	99	93.127	ENSORLG00020004438	-	98	93.127	Oryzias_latipes_hni
ENSNBRG00000011376	-	93	70.290	ENSORLG00020000082	-	97	68.836	Oryzias_latipes_hni
ENSNBRG00000011376	-	93	72.101	ENSORLG00015004280	-	97	69.521	Oryzias_latipes_hsok
ENSNBRG00000011376	-	99	93.471	ENSORLG00015004727	-	98	93.471	Oryzias_latipes_hsok
ENSNBRG00000011376	-	93	71.739	ENSOMEG00000011821	-	98	68.475	Oryzias_melastigma
ENSNBRG00000011376	-	99	93.471	ENSOMEG00000001170	-	98	93.471	Oryzias_melastigma
ENSNBRG00000011376	-	99	75.342	ENSPKIG00000015926	-	98	75.342	Paramormyrops_kingsleyae
ENSNBRG00000011376	-	77	84.914	ENSPMGG00000014481	-	96	83.621	Periophthalmus_magnuspinnatus
ENSNBRG00000011376	-	99	66.892	ENSPMGG00000009532	-	98	65.541	Periophthalmus_magnuspinnatus
ENSNBRG00000011376	-	99	68.730	ENSPFOG00000006120	-	100	68.730	Poecilia_formosa
ENSNBRG00000011376	-	98	93.471	ENSPLAG00000011323	ralyl	100	93.471	Poecilia_latipinna
ENSNBRG00000011376	-	99	65.870	ENSPLAG00000009877	-	76	65.870	Poecilia_latipinna
ENSNBRG00000011376	-	98	93.471	ENSPMEG00000023847	ralyl	100	93.471	Poecilia_mexicana
ENSNBRG00000011376	-	99	65.870	ENSPMEG00000013624	-	80	65.870	Poecilia_mexicana
ENSNBRG00000011376	-	98	92.096	ENSPREG00000001956	ralyl	100	92.096	Poecilia_reticulata
ENSNBRG00000011376	-	99	71.672	ENSPREG00000013805	-	98	65.397	Poecilia_reticulata
ENSNBRG00000011376	-	100	99.659	ENSPNYG00000003548	-	100	99.659	Pundamilia_nyererei
ENSNBRG00000011376	-	98	66.554	ENSPNYG00000008772	-	97	66.554	Pundamilia_nyererei
ENSNBRG00000011376	-	99	85.911	ENSPNAG00000000498	-	87	85.567	Pygocentrus_nattereri
ENSNBRG00000011376	-	93	66.667	ENSPNAG00000026098	-	98	64.261	Pygocentrus_nattereri
ENSNBRG00000011376	-	93	73.626	ENSSFOG00015004575	-	96	73.356	Scleropages_formosus
ENSNBRG00000011376	-	99	86.007	ENSSFOG00015009401	-	98	84.300	Scleropages_formosus
ENSNBRG00000011376	-	98	69.310	ENSSMAG00000015907	-	93	69.310	Scophthalmus_maximus
ENSNBRG00000011376	-	99	90.378	ENSSMAG00000005608	-	98	90.378	Scophthalmus_maximus
ENSNBRG00000011376	-	99	93.127	ENSSDUG00000007587	-	98	93.127	Seriola_dumerili
ENSNBRG00000011376	-	99	71.284	ENSSDUG00000012473	-	98	70.847	Seriola_dumerili
ENSNBRG00000011376	-	99	70.508	ENSSLDG00000011534	-	98	70.508	Seriola_lalandi_dorsalis
ENSNBRG00000011376	-	99	92.466	ENSSLDG00000020603	-	98	92.466	Seriola_lalandi_dorsalis
ENSNBRG00000011376	-	98	62.500	ENSSPAG00000013858	-	93	62.500	Stegastes_partitus
ENSNBRG00000011376	-	83	74.180	ENSTRUG00000003829	-	95	68.750	Takifugu_rubripes
ENSNBRG00000011376	-	98	66.890	ENSTNIG00000005594	-	99	66.555	Tetraodon_nigroviridis
ENSNBRG00000011376	-	99	68.493	ENSXETG00000017729	ralyl	97	69.521	Xenopus_tropicalis
ENSNBRG00000011376	-	98	90.970	ENSXCOG00000015156	-	93	90.970	Xiphophorus_couchianus
ENSNBRG00000011376	-	99	71.525	ENSXMAG00000007614	-	98	71.525	Xiphophorus_maculatus
ENSNBRG00000011376	-	100	93.857	ENSXMAG00000008396	-	98	93.471	Xiphophorus_maculatus