EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNBRG00000011386 (Gene tree)
Gene ID
-
Gene Symbol
lsm5
Alias
zgc:171959
Full Name
U6 snRNA-associated Sm-like protein LSm5-like
Gene Type
protein_coding
Species
Neolamprologus_brichardi
Status
putative
Strand
Plus strand
Length
3025 bases
Position
chrJH422395.1:1574375-1577399
Accession
102776822
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNBRP00000014725LSMPF01423.223.6e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNBRT00000015128-228XM_006804460ENSNBRP0000001472575 (aa)XP_006804523-
Gene Model
Click here to download ENSNBRG00000011386's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000011386's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNBRG00000011386lsm58435.211ENSNBRG00000015473snrpe7535.211
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNBRG00000011386lsm57696.491ENSG00000106355LSM59296.491Homo_sapiens
ENSNBRG00000011386lsm57698.246ENSAPOG00000020779LSM56398.246Acanthochromis_polyacanthus
ENSNBRG00000011386lsm57698.246ENSAPOG00000011743LSM59298.246Acanthochromis_polyacanthus
ENSNBRG00000011386lsm57696.491ENSAMEG00000006700LSM56396.491Ailuropoda_melanoleuca
ENSNBRG00000011386lsm56095.556ENSACIG00000019185lsm58095.556Amphilophus_citrinellus
ENSNBRG00000011386lsm57698.246ENSAOCG00000001636lsm56398.246Amphiprion_ocellaris
ENSNBRG00000011386lsm57698.246ENSAPEG00000008151lsm56398.246Amphiprion_percula
ENSNBRG00000011386lsm57698.246ENSAPEG00000008201lsm59298.246Amphiprion_percula
ENSNBRG00000011386lsm56495.833ENSATEG00000020470lsm57695.556Anabas_testudineus
ENSNBRG00000011386lsm57396.364ENSAPLG00000008171LSM57496.364Anas_platyrhynchos
ENSNBRG00000011386lsm57691.228ENSANAG00000024192-5991.228Aotus_nancymaae
ENSNBRG00000011386lsm57685.965ENSANAG00000037758-7185.965Aotus_nancymaae
ENSNBRG00000011386lsm57696.491ENSANAG00000034409-6396.491Aotus_nancymaae
ENSNBRG00000011386lsm57698.246ENSACLG00000012891lsm56598.246Astatotilapia_calliptera
ENSNBRG00000011386lsm57696.491ENSBTAG00000002332LSM56396.491Bos_taurus
ENSNBRG00000011386lsm57675.439WBGene00003079lsm-56375.439Caenorhabditis_elegans
ENSNBRG00000011386lsm57685.965ENSCJAG00000005678-6385.965Callithrix_jacchus
ENSNBRG00000011386lsm57694.737ENSCAFG00000019261-6394.737Canis_familiaris
ENSNBRG00000011386lsm57696.491ENSCAFG00020004946LSM56396.491Canis_lupus_dingo
ENSNBRG00000011386lsm57692.982ENSCHIG00000004079-6292.982Capra_hircus
ENSNBRG00000011386lsm55176.316ENSCHIG00000021428-5768.519Capra_hircus
ENSNBRG00000011386lsm57696.491ENSCHIG00000024539LSM56396.491Capra_hircus
ENSNBRG00000011386lsm59371.053ENSTSYG00000026530-8371.053Carlito_syrichta
ENSNBRG00000011386lsm57696.491ENSTSYG00000006449-6396.491Carlito_syrichta
ENSNBRG00000011386lsm59972.368ENSTSYG00000028728-8972.368Carlito_syrichta
ENSNBRG00000011386lsm58456.716ENSTSYG00000036637-6756.716Carlito_syrichta
ENSNBRG00000011386lsm57687.719ENSCAPG00000006980LSM57687.719Cavia_aperea
ENSNBRG00000011386lsm57696.491ENSCPOG00000036386LSM57693.333Cavia_porcellus
ENSNBRG00000011386lsm57694.737ENSCCAG00000000821-6394.737Cebus_capucinus
ENSNBRG00000011386lsm57694.737ENSCCAG00000032123-6394.737Cebus_capucinus
ENSNBRG00000011386lsm57696.491ENSCCAG00000037808-6396.491Cebus_capucinus
ENSNBRG00000011386lsm57689.474ENSCCAG00000032792-7189.474Cebus_capucinus
ENSNBRG00000011386lsm57682.456ENSCCAG00000037334-7482.456Cebus_capucinus
ENSNBRG00000011386lsm57680.702ENSCATG00000014790-6080.702Cercocebus_atys
ENSNBRG00000011386lsm57696.491ENSCATG00000040218LSM59296.491Cercocebus_atys
ENSNBRG00000011386lsm57696.491ENSCLAG00000000202LSM57693.333Chinchilla_lanigera
ENSNBRG00000011386lsm57680.702ENSCLAG00000005062-5780.702Chinchilla_lanigera
ENSNBRG00000011386lsm55597.561ENSCHOG00000005335LSM55497.561Choloepus_hoffmanni
ENSNBRG00000011386lsm57696.491ENSCPBG00000013685LSM56396.491Chrysemys_picta_bellii
ENSNBRG00000011386lsm57687.719ENSCING00000020625-6487.719Ciona_intestinalis
ENSNBRG00000011386lsm57687.719ENSCSAVG00000001439-6587.719Ciona_savignyi
ENSNBRG00000011386lsm57696.491ENSCANG00000039909LSM59296.491Colobus_angolensis_palliatus
ENSNBRG00000011386lsm57696.491ENSCGRG00001015461Lsm57693.333Cricetulus_griseus_chok1gshd
ENSNBRG00000011386lsm57696.491ENSCGRG00000007677Lsm57696.491Cricetulus_griseus_crigri
ENSNBRG00000011386lsm56095.556ENSCSEG00000015286lsm57695.556Cynoglossus_semilaevis
ENSNBRG00000011386lsm57698.246ENSCVAG00000004262lsm56498.246Cyprinodon_variegatus
ENSNBRG00000011386lsm57698.246ENSDARG00000071573lsm59298.246Danio_rerio
ENSNBRG00000011386lsm57184.906ENSDNOG00000049495-5884.906Dasypus_novemcinctus
ENSNBRG00000011386lsm57696.491ENSDNOG00000034958LSM56396.491Dasypus_novemcinctus
ENSNBRG00000011386lsm57696.491ENSDORG00000009422Lsm57693.333Dipodomys_ordii
ENSNBRG00000011386lsm57184.906FBgn0035675CG66105884.906Drosophila_melanogaster
ENSNBRG00000011386lsm57673.684ENSETEG00000010651-5973.684Echinops_telfairi
ENSNBRG00000011386lsm57571.429ENSETEG00000001469-5671.429Echinops_telfairi
ENSNBRG00000011386lsm59162.500ENSETEG00000016074-9562.500Echinops_telfairi
ENSNBRG00000011386lsm57696.491ENSETEG00000018068LSM56396.491Echinops_telfairi
ENSNBRG00000011386lsm58362.903ENSETEG00000000777-8260.000Echinops_telfairi
ENSNBRG00000011386lsm57692.982ENSEBUG00000008540lsm56392.982Eptatretus_burgeri
ENSNBRG00000011386lsm57696.491ENSEASG00005003500LSM56396.491Equus_asinus_asinus
ENSNBRG00000011386lsm57673.684ENSECAG00000018445LSM55973.684Equus_caballus
ENSNBRG00000011386lsm57689.474ENSEEUG00000004102LSM59589.474Erinaceus_europaeus
ENSNBRG00000011386lsm57698.246ENSELUG00000007792lsm56398.246Esox_lucius
ENSNBRG00000011386lsm57696.491ENSFCAG00000000230LSM56396.491Felis_catus
ENSNBRG00000011386lsm57696.491ENSFALG00000001892LSM56996.491Ficedula_albicollis
ENSNBRG00000011386lsm57666.667ENSFDAG00000008685-6366.667Fukomys_damarensis
ENSNBRG00000011386lsm57696.491ENSFDAG00000008767LSM57693.333Fukomys_damarensis
ENSNBRG00000011386lsm57682.456ENSFHEG00000004011lsm56082.456Fundulus_heteroclitus
ENSNBRG00000011386lsm57598.214ENSGMOG00000018235lsm56298.214Gadus_morhua
ENSNBRG00000011386lsm57696.491ENSGALG00000041625LSM56396.491Gallus_gallus
ENSNBRG00000011386lsm57698.246ENSGAFG00000016824lsm59298.246Gambusia_affinis
ENSNBRG00000011386lsm57698.246ENSGACG00000005528lsm56398.246Gasterosteus_aculeatus
ENSNBRG00000011386lsm57696.491ENSGAGG00000015593LSM56396.491Gopherus_agassizii
ENSNBRG00000011386lsm57696.491ENSGGOG00000043469LSM56396.491Gorilla_gorilla
ENSNBRG00000011386lsm57698.246ENSHBUG00000013773lsm56598.246Haplochromis_burtoni
ENSNBRG00000011386lsm57696.491ENSHGLG00000011765LSM57693.333Heterocephalus_glaber_female
ENSNBRG00000011386lsm59973.750ENSHGLG00100015610LSM57597.674Heterocephalus_glaber_male
ENSNBRG00000011386lsm56093.333ENSHCOG00000008288lsm57693.333Hippocampus_comes
ENSNBRG00000011386lsm57698.246ENSIPUG00000021095LSM56398.246Ictalurus_punctatus
ENSNBRG00000011386lsm57696.491ENSSTOG00000012662LSM57693.333Ictidomys_tridecemlineatus
ENSNBRG00000011386lsm57684.211ENSSTOG00000033886-6484.211Ictidomys_tridecemlineatus
ENSNBRG00000011386lsm57678.947ENSJJAG00000016144-6878.947Jaculus_jaculus
ENSNBRG00000011386lsm56093.333ENSJJAG00000004475-5793.333Jaculus_jaculus
ENSNBRG00000011386lsm57696.491ENSJJAG00000012145-7693.333Jaculus_jaculus
ENSNBRG00000011386lsm57696.491ENSKMAG00000021861lsm56396.491Kryptolebias_marmoratus
ENSNBRG00000011386lsm57696.491ENSLACG00000022448LSM56396.491Latimeria_chalumnae
ENSNBRG00000011386lsm57698.246ENSLOCG00000012903lsm56398.246Lepisosteus_oculatus
ENSNBRG00000011386lsm57696.491ENSLAFG00000029579LSM56396.491Loxodonta_africana
ENSNBRG00000011386lsm57682.456ENSLAFG00000027938-7282.456Loxodonta_africana
ENSNBRG00000011386lsm57694.737ENSMFAG00000030152-6394.737Macaca_fascicularis
ENSNBRG00000011386lsm57696.491ENSMFAG00000038508LSM56396.491Macaca_fascicularis
ENSNBRG00000011386lsm57682.456ENSMMUG00000039822-6082.456Macaca_mulatta
ENSNBRG00000011386lsm57694.737ENSMMUG00000030131-6394.737Macaca_mulatta
ENSNBRG00000011386lsm57696.491ENSMNEG00000015331LSM59296.491Macaca_nemestrina
ENSNBRG00000011386lsm57694.737ENSMNEG00000037935-6394.737Macaca_nemestrina
ENSNBRG00000011386lsm57680.702ENSMLEG00000034037-6080.702Mandrillus_leucophaeus
ENSNBRG00000011386lsm57696.491ENSMLEG00000024945LSM56396.491Mandrillus_leucophaeus
ENSNBRG00000011386lsm57692.982ENSMAMG00000012869lsm56392.982Mastacembelus_armatus
ENSNBRG00000011386lsm57698.246ENSMZEG00005019554lsm56598.246Maylandia_zebra
ENSNBRG00000011386lsm57696.491ENSMGAG00000012117LSM56396.491Meleagris_gallopavo
ENSNBRG00000011386lsm57696.491ENSMAUG00000012222Lsm57693.333Mesocricetus_auratus
ENSNBRG00000011386lsm57696.491ENSMAUG00000008132-6396.491Mesocricetus_auratus
ENSNBRG00000011386lsm57694.737ENSMICG00000033928-7494.737Microcebus_murinus
ENSNBRG00000011386lsm57696.491ENSMICG00000005353LSM56396.491Microcebus_murinus
ENSNBRG00000011386lsm57696.491ENSMOCG00000012018Lsm57693.333Microtus_ochrogaster
ENSNBRG00000011386lsm57698.246ENSMMOG00000004026lsm56698.246Mola_mola
ENSNBRG00000011386lsm57696.491ENSMODG00000013274-9296.491Monodelphis_domestica
ENSNBRG00000011386lsm57692.982ENSMALG00000010343lsm59292.982Monopterus_albus
ENSNBRG00000011386lsm57696.491MGP_CAROLIEiJ_G0028421Lsm57693.333Mus_caroli
ENSNBRG00000011386lsm57696.491ENSMUSG00000091625Lsm57693.333Mus_musculus
ENSNBRG00000011386lsm57696.491MGP_PahariEiJ_G0022171Lsm57693.333Mus_pahari
ENSNBRG00000011386lsm57696.491MGP_SPRETEiJ_G0029423Lsm57693.333Mus_spretus
ENSNBRG00000011386lsm57696.491ENSMLUG00000017028LSM56396.491Myotis_lucifugus
ENSNBRG00000011386lsm59970.513ENSNGAG00000017707-9070.513Nannospalax_galili
ENSNBRG00000011386lsm57696.491ENSNGAG00000024142Lsm57693.333Nannospalax_galili
ENSNBRG00000011386lsm58573.438ENSNGAG00000022569-7273.438Nannospalax_galili
ENSNBRG00000011386lsm57696.491ENSNLEG00000015268LSM56396.491Nomascus_leucogenys
ENSNBRG00000011386lsm57696.491ENSOPRG00000002443LSM57696.491Ochotona_princeps
ENSNBRG00000011386lsm57696.491ENSODEG00000019072-6396.491Octodon_degus
ENSNBRG00000011386lsm57696.491ENSODEG00000008258-7693.333Octodon_degus
ENSNBRG00000011386lsm57255.556ENSOANG00000014540-7255.556Ornithorhynchus_anatinus
ENSNBRG00000011386lsm57696.491ENSOCUG00000029043LSM56396.491Oryctolagus_cuniculus
ENSNBRG00000011386lsm57696.491ENSORLG00020003019lsm55996.491Oryzias_latipes_hni
ENSNBRG00000011386lsm57696.491ENSORLG00015003338lsm56396.491Oryzias_latipes_hsok
ENSNBRG00000011386lsm57696.491ENSOMEG00000001078lsm56396.491Oryzias_melastigma
ENSNBRG00000011386lsm57696.491ENSOGAG00000013892LSM56396.491Otolemur_garnettii
ENSNBRG00000011386lsm57696.491ENSOARG00000006944LSM56396.491Ovis_aries
ENSNBRG00000011386lsm57696.491ENSPPAG00000003697-6396.491Pan_paniscus
ENSNBRG00000011386lsm57696.491ENSPPRG00000002550LSM56396.491Panthera_pardus
ENSNBRG00000011386lsm57696.491ENSPTIG00000015604LSM56396.491Panthera_tigris_altaica
ENSNBRG00000011386lsm57696.491ENSPTRG00000019057LSM56396.491Pan_troglodytes
ENSNBRG00000011386lsm57670.175ENSPTRG00000049488-6173.684Pan_troglodytes
ENSNBRG00000011386lsm57694.737ENSPANG00000033477-6394.737Papio_anubis
ENSNBRG00000011386lsm57696.491ENSPANG00000032179-6396.491Papio_anubis
ENSNBRG00000011386lsm57682.456ENSPANG00000032538-6082.456Papio_anubis
ENSNBRG00000011386lsm57698.246ENSPKIG00000011910lsm56398.246Paramormyrops_kingsleyae
ENSNBRG00000011386lsm57396.364ENSPSIG00000014796LSM57496.364Pelodiscus_sinensis
ENSNBRG00000011386lsm57698.246ENSPMGG00000011699lsm59298.246Periophthalmus_magnuspinnatus
ENSNBRG00000011386lsm57670.175ENSPEMG00000022375-5970.175Peromyscus_maniculatus_bairdii
ENSNBRG00000011386lsm57698.246ENSPFOG00000001433lsm56398.246Poecilia_formosa
ENSNBRG00000011386lsm57698.246ENSPLAG00000009665lsm56398.246Poecilia_latipinna
ENSNBRG00000011386lsm57698.246ENSPMEG00000022265lsm56398.246Poecilia_mexicana
ENSNBRG00000011386lsm57698.246ENSPREG00000022452lsm59298.246Poecilia_reticulata
ENSNBRG00000011386lsm57691.228ENSPPYG00000017661LSM56391.228Pongo_abelii
ENSNBRG00000011386lsm56397.872ENSPCAG00000013740LSM55897.872Procavia_capensis
ENSNBRG00000011386lsm57696.491ENSPVAG00000009786LSM56396.491Pteropus_vampyrus
ENSNBRG00000011386lsm57698.246ENSPNYG00000022236lsm56598.246Pundamilia_nyererei
ENSNBRG00000011386lsm57698.246ENSPNAG00000001887lsm56398.246Pygocentrus_nattereri
ENSNBRG00000011386lsm57696.491ENSRNOG00000027305AABR07065089.16296.491Rattus_norvegicus
ENSNBRG00000011386lsm57696.491ENSRNOG00000042126Lsm56396.491Rattus_norvegicus
ENSNBRG00000011386lsm57696.491ENSRBIG00000027803-9296.491Rhinopithecus_bieti
ENSNBRG00000011386lsm57694.737ENSRBIG00000024431-6394.737Rhinopithecus_bieti
ENSNBRG00000011386lsm57696.491ENSRBIG00000030340-6396.491Rhinopithecus_bieti
ENSNBRG00000011386lsm57696.491ENSRBIG00000030714-6396.491Rhinopithecus_bieti
ENSNBRG00000011386lsm57696.491ENSRROG00000004655-6396.491Rhinopithecus_roxellana
ENSNBRG00000011386lsm57696.491ENSRROG00000023884-6396.491Rhinopithecus_roxellana
ENSNBRG00000011386lsm57696.491ENSRROG00000042782-9296.491Rhinopithecus_roxellana
ENSNBRG00000011386lsm56754.545YER146W-5954.545Saccharomyces_cerevisiae
ENSNBRG00000011386lsm57694.737ENSSBOG00000019124-6394.737Saimiri_boliviensis_boliviensis
ENSNBRG00000011386lsm57696.491ENSSBOG00000012312LSM56396.491Saimiri_boliviensis_boliviensis
ENSNBRG00000011386lsm57387.273ENSSBOG00000034794-6887.273Saimiri_boliviensis_boliviensis
ENSNBRG00000011386lsm57698.246ENSSFOG00015010099lsm56398.246Scleropages_formosus
ENSNBRG00000011386lsm56095.556ENSSMAG00000007895lsm57695.556Scophthalmus_maximus
ENSNBRG00000011386lsm57698.246ENSSDUG00000010762lsm59298.246Seriola_dumerili
ENSNBRG00000011386lsm57698.246ENSSLDG00000025242lsm57695.556Seriola_lalandi_dorsalis
ENSNBRG00000011386lsm57175.472ENSSLDG00000008014-6375.472Seriola_lalandi_dorsalis
ENSNBRG00000011386lsm57652.632ENSSARG00000003330LSM56352.632Sorex_araneus
ENSNBRG00000011386lsm57694.737ENSSPUG00000002690LSM59294.737Sphenodon_punctatus
ENSNBRG00000011386lsm56095.556ENSSPAG00000005435lsm57695.556Stegastes_partitus
ENSNBRG00000011386lsm57696.491ENSSSCG00000026064-6396.491Sus_scrofa
ENSNBRG00000011386lsm57696.491ENSTGUG00000017539LSM56396.491Taeniopygia_guttata
ENSNBRG00000011386lsm57696.491ENSTNIG00000008695lsm56596.491Tetraodon_nigroviridis
ENSNBRG00000011386lsm57696.491ENSTBEG00000004876LSM56396.491Tupaia_belangeri
ENSNBRG00000011386lsm57696.491ENSTTRG00000004237LSM56396.491Tursiops_truncatus
ENSNBRG00000011386lsm57696.491ENSVPAG00000009985LSM56396.491Vicugna_pacos
ENSNBRG00000011386lsm57696.491ENSVVUG00000021311LSM56396.491Vulpes_vulpes
ENSNBRG00000011386lsm56495.833ENSXETG00000026465lsm55995.833Xenopus_tropicalis
ENSNBRG00000011386lsm57698.246ENSXCOG00000015348lsm59298.246Xiphophorus_couchianus
ENSNBRG00000011386lsm57698.246ENSXMAG00000029988lsm56398.246Xiphophorus_maculatus

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