EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNBRG00000011682 (Gene tree)
Gene ID
102783443
Gene Symbol
snrpf
Alias
snrpfl
Full Name
small nuclear ribonucleoprotein F-like
Gene Type
protein_coding
Species
Neolamprologus_brichardi
Status
putative
Strand
Minus strand
Length
2345 bases
Position
chrJH422274.1:13336759-13339103
Accession
102783443
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNBRP00000015078LSMPF01423.221e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNBRT00000015491-527XM_006780894ENSNBRP0000001507898 (aa)XP_006780957-
Gene Model
Click here to download ENSNBRG00000011682's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000011682's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNBRG00000011682snrpf6750.000ENSNBRG00000004887lsm68350.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNBRG00000011682snrpf8797.647ENSG00000139343SNRPF9997.647Homo_sapiens
ENSNBRG00000011682snrpf9198.876ENSAPOG00000003377snrpf7098.876Acanthochromis_polyacanthus
ENSNBRG00000011682snrpf8797.647ENSAMEG00000002166-10097.647Ailuropoda_melanoleuca
ENSNBRG00000011682snrpf7784.000ENSAMEG00000018718-8685.135Ailuropoda_melanoleuca
ENSNBRG00000011682snrpf86100.000ENSACIG00000013216snrpf99100.000Amphilophus_citrinellus
ENSNBRG00000011682snrpf86100.000ENSAOCG00000015108snrpf99100.000Amphiprion_ocellaris
ENSNBRG00000011682snrpf86100.000ENSAPEG00000022022snrpf99100.000Amphiprion_percula
ENSNBRG00000011682snrpf8897.674ENSATEG00000022625snrpf9297.674Anabas_testudineus
ENSNBRG00000011682snrpf7894.737ENSACAG00000014073SNRPF8794.737Anolis_carolinensis
ENSNBRG00000011682snrpf8797.647ENSANAG00000032845SNRPF9997.647Aotus_nancymaae
ENSNBRG00000011682snrpf7885.714ENSANAG00000020297-7185.714Aotus_nancymaae
ENSNBRG00000011682snrpf7667.568ENSANAG00000025860-8367.568Aotus_nancymaae
ENSNBRG00000011682snrpf86100.000ENSACLG00000016066snrpf99100.000Astatotilapia_calliptera
ENSNBRG00000011682snrpf7697.297ENSAMXG00000007421snrpf8697.297Astyanax_mexicanus
ENSNBRG00000011682snrpf7990.909ENSBTAG00000050012-9190.541Bos_taurus
ENSNBRG00000011682snrpf8797.647ENSBTAG00000016271SNRPF9997.647Bos_taurus
ENSNBRG00000011682snrpf7971.429WBGene00004918snr-58573.611Caenorhabditis_elegans
ENSNBRG00000011682snrpf8797.647ENSCJAG00000002705-9997.647Callithrix_jacchus
ENSNBRG00000011682snrpf7291.549ENSCAFG00000031151-8591.781Canis_familiaris
ENSNBRG00000011682snrpf7697.297ENSCAFG00000006395-6797.297Canis_familiaris
ENSNBRG00000011682snrpf8085.897ENSCAFG00020013161-7494.286Canis_lupus_dingo
ENSNBRG00000011682snrpf7291.549ENSCAFG00020010823-8591.781Canis_lupus_dingo
ENSNBRG00000011682snrpf7683.784ENSTSYG00000030635-8683.784Carlito_syrichta
ENSNBRG00000011682snrpf8391.358ENSTSYG00000031636-6193.151Carlito_syrichta
ENSNBRG00000011682snrpf7692.000ENSTSYG00000036502-8692.000Carlito_syrichta
ENSNBRG00000011682snrpf8797.647ENSCAPG00000007242SNRPF10097.647Cavia_aperea
ENSNBRG00000011682snrpf8797.647ENSCPOG00000013898SNRPF9997.647Cavia_porcellus
ENSNBRG00000011682snrpf8797.647ENSCCAG00000037378-9997.647Cebus_capucinus
ENSNBRG00000011682snrpf8796.471ENSCCAG00000017356-9996.471Cebus_capucinus
ENSNBRG00000011682snrpf8688.095ENSCCAG00000033627-5789.041Cebus_capucinus
ENSNBRG00000011682snrpf8797.647ENSCLAG00000007200SNRPF9997.647Chinchilla_lanigera
ENSNBRG00000011682snrpf8587.952ENSCSAG00000003602-6787.952Chlorocebus_sabaeus
ENSNBRG00000011682snrpf6496.825ENSCHOG00000009392SNRPF9896.825Choloepus_hoffmanni
ENSNBRG00000011682snrpf7689.189ENSCPBG00000006227-8689.189Chrysemys_picta_bellii
ENSNBRG00000011682snrpf9188.764ENSCPBG00000024287-6784.337Chrysemys_picta_bellii
ENSNBRG00000011682snrpf8785.882ENSCPBG00000001985-8887.838Chrysemys_picta_bellii
ENSNBRG00000011682snrpf8787.059ENSCPBG00000026463-8687.838Chrysemys_picta_bellii
ENSNBRG00000011682snrpf9084.091ENSCSAVG00000007498-8885.714Ciona_savignyi
ENSNBRG00000011682snrpf8797.647ENSCGRG00001017100-9997.647Cricetulus_griseus_chok1gshd
ENSNBRG00000011682snrpf7490.411ENSCGRG00001008965-5790.411Cricetulus_griseus_chok1gshd
ENSNBRG00000011682snrpf8091.026ENSCGRG00000018878-9190.411Cricetulus_griseus_crigri
ENSNBRG00000011682snrpf8797.647ENSCGRG00000000336-9997.647Cricetulus_griseus_crigri
ENSNBRG00000011682snrpf8898.837ENSCSEG00000004748snrpf9998.824Cynoglossus_semilaevis
ENSNBRG00000011682snrpf9098.864ENSCVAG00000000397snrpf7098.864Cyprinodon_variegatus
ENSNBRG00000011682snrpf8797.701ENSDARG00000105037snrpf9997.701Danio_rerio
ENSNBRG00000011682snrpf8076.923ENSDNOG00000049373-6876.923Dasypus_novemcinctus
ENSNBRG00000011682snrpf8091.026ENSDNOG00000048989-7091.026Dasypus_novemcinctus
ENSNBRG00000011682snrpf6094.915ENSDORG00000029740-7294.915Dipodomys_ordii
ENSNBRG00000011682snrpf7287.324ENSDORG00000025351-9987.324Dipodomys_ordii
ENSNBRG00000011682snrpf8677.381FBgn0000426SmF8380.822Drosophila_melanogaster
ENSNBRG00000011682snrpf8797.647ENSETEG00000001558-9997.647Echinops_telfairi
ENSNBRG00000011682snrpf8475.610ENSEBUG00000001793-7286.567Eptatretus_burgeri
ENSNBRG00000011682snrpf8587.952ENSECAG00000019817SNRPF6787.952Equus_caballus
ENSNBRG00000011682snrpf8797.647ENSEEUG00000013509SNRPF10097.647Erinaceus_europaeus
ENSNBRG00000011682snrpf8797.647ENSELUG00000003121RUXF9997.647Esox_lucius
ENSNBRG00000011682snrpf8794.118ENSELUG00000007737RUXF8595.946Esox_lucius
ENSNBRG00000011682snrpf8797.647ENSFCAG00000029966-9997.647Felis_catus
ENSNBRG00000011682snrpf7672.973ENSFCAG00000021942-8572.973Felis_catus
ENSNBRG00000011682snrpf8575.904ENSFCAG00000031148-7174.026Felis_catus
ENSNBRG00000011682snrpf8897.674ENSFALG00000010799SNRPF10097.674Ficedula_albicollis
ENSNBRG00000011682snrpf8797.647ENSFDAG00000002831-9997.647Fukomys_damarensis
ENSNBRG00000011682snrpf90100.000ENSFHEG00000003240snrpf77100.000Fundulus_heteroclitus
ENSNBRG00000011682snrpf87100.000ENSGMOG00000007741snrpf100100.000Gadus_morhua
ENSNBRG00000011682snrpf8797.647ENSGALG00000011409SNRPF9997.647Gallus_gallus
ENSNBRG00000011682snrpf86100.000ENSGAFG00000016187snrpf97100.000Gambusia_affinis
ENSNBRG00000011682snrpf8798.824ENSGACG00000020055snrpf10098.824Gasterosteus_aculeatus
ENSNBRG00000011682snrpf7690.541ENSGAGG00000012945-8181.818Gopherus_agassizii
ENSNBRG00000011682snrpf7680.000ENSGAGG00000020974-6577.922Gopherus_agassizii
ENSNBRG00000011682snrpf6188.333ENSGAGG00000011163-8691.837Gopherus_agassizii
ENSNBRG00000011682snrpf9183.146ENSGAGG00000022991-8784.615Gopherus_agassizii
ENSNBRG00000011682snrpf6983.824ENSGAGG00000014132-8283.824Gopherus_agassizii
ENSNBRG00000011682snrpf8797.647ENSGGOG00000001127-9997.647Gorilla_gorilla
ENSNBRG00000011682snrpf8074.359ENSGGOG00000039564-8972.973Gorilla_gorilla
ENSNBRG00000011682snrpf8578.313ENSGGOG00000039936-8275.676Gorilla_gorilla
ENSNBRG00000011682snrpf8796.471ENSHGLG00000021172-9996.471Heterocephalus_glaber_female
ENSNBRG00000011682snrpf8797.647ENSHGLG00000009108SNRPF9997.647Heterocephalus_glaber_female
ENSNBRG00000011682snrpf8797.647ENSHGLG00100008103-10097.647Heterocephalus_glaber_male
ENSNBRG00000011682snrpf8796.471ENSHGLG00100019596-9996.471Heterocephalus_glaber_male
ENSNBRG00000011682snrpf6488.571ENSHCOG00000018663snrpf5588.571Hippocampus_comes
ENSNBRG00000011682snrpf87100.000ENSIPUG00000018994snrpf99100.000Ictalurus_punctatus
ENSNBRG00000011682snrpf8797.647ENSSTOG00000010434-9997.647Ictidomys_tridecemlineatus
ENSNBRG00000011682snrpf6891.045ENSJJAG00000004828-8692.857Jaculus_jaculus
ENSNBRG00000011682snrpf8782.353ENSJJAG00000010502-8883.784Jaculus_jaculus
ENSNBRG00000011682snrpf8778.824ENSJJAG00000004558-8879.730Jaculus_jaculus
ENSNBRG00000011682snrpf8797.647ENSJJAG00000011272-9997.647Jaculus_jaculus
ENSNBRG00000011682snrpf86100.000ENSKMAG00000013566snrpf98100.000Kryptolebias_marmoratus
ENSNBRG00000011682snrpf8798.824ENSLBEG00000008800snrpf9998.824Labrus_bergylta
ENSNBRG00000011682snrpf7993.506ENSLACG00000002456-6693.506Latimeria_chalumnae
ENSNBRG00000011682snrpf8797.647ENSLOCG00000015744snrpf9997.647Lepisosteus_oculatus
ENSNBRG00000011682snrpf8897.674ENSLAFG00000017426SNRPF10097.674Loxodonta_africana
ENSNBRG00000011682snrpf8698.810ENSMAMG00000016593snrpf9998.810Mastacembelus_armatus
ENSNBRG00000011682snrpf86100.000ENSMZEG00005014701snrpf99100.000Maylandia_zebra
ENSNBRG00000011682snrpf8697.619ENSMGAG00000011453-7697.619Meleagris_gallopavo
ENSNBRG00000011682snrpf7697.297ENSMAUG00000016909-10097.297Mesocricetus_auratus
ENSNBRG00000011682snrpf7693.243ENSMAUG00000008799-8693.243Mesocricetus_auratus
ENSNBRG00000011682snrpf6290.164ENSMAUG00000010289-6694.000Mesocricetus_auratus
ENSNBRG00000011682snrpf7697.297ENSMAUG00000019737-10097.297Mesocricetus_auratus
ENSNBRG00000011682snrpf8797.647ENSMICG00000012153-9997.647Microcebus_murinus
ENSNBRG00000011682snrpf7690.541ENSMICG00000030494-5990.541Microcebus_murinus
ENSNBRG00000011682snrpf6980.882ENSMOCG00000020220-8780.882Microtus_ochrogaster
ENSNBRG00000011682snrpf8797.647ENSMOCG00000020437Snrpf9997.647Microtus_ochrogaster
ENSNBRG00000011682snrpf7683.784ENSMOCG00000022166-8183.784Microtus_ochrogaster
ENSNBRG00000011682snrpf8798.824ENSMMOG00000007127snrpf10098.824Mola_mola
ENSNBRG00000011682snrpf8092.308ENSMODG00000008091SNRPF6597.297Monodelphis_domestica
ENSNBRG00000011682snrpf86100.000ENSMALG00000012328snrpf99100.000Monopterus_albus
ENSNBRG00000011682snrpf8797.647MGP_CAROLIEiJ_G0015735-9997.647Mus_caroli
ENSNBRG00000011682snrpf8797.647ENSMUSG00000020018Snrpf9997.647Mus_musculus
ENSNBRG00000011682snrpf8797.647MGP_PahariEiJ_G0031350Snrpf9997.647Mus_pahari
ENSNBRG00000011682snrpf8797.647MGP_SPRETEiJ_G0016553Snrpf9997.647Mus_spretus
ENSNBRG00000011682snrpf8688.095ENSMPUG00000007176-7588.095Mustela_putorius_furo
ENSNBRG00000011682snrpf8092.308ENSMLUG00000027932-7492.308Myotis_lucifugus
ENSNBRG00000011682snrpf7697.297ENSMLUG00000026149-7097.297Myotis_lucifugus
ENSNBRG00000011682snrpf8797.647ENSMLUG00000013577-10097.647Myotis_lucifugus
ENSNBRG00000011682snrpf8778.824ENSMLUG00000026269-7077.027Myotis_lucifugus
ENSNBRG00000011682snrpf7697.297ENSMLUG00000029201-7097.297Myotis_lucifugus
ENSNBRG00000011682snrpf6490.476ENSNGAG00000005851-7190.000Nannospalax_galili
ENSNBRG00000011682snrpf8797.647ENSNGAG00000024292-9997.647Nannospalax_galili
ENSNBRG00000011682snrpf7670.270ENSMEUG00000000671SNRPF8770.270Notamacropus_eugenii
ENSNBRG00000011682snrpf8797.647ENSODEG00000010328-9997.647Octodon_degus
ENSNBRG00000011682snrpf9194.382ENSOCUG00000010925SNRPF7994.382Oryctolagus_cuniculus
ENSNBRG00000011682snrpf7697.297ENSORLG00020008216snrpf8797.297Oryzias_latipes_hni
ENSNBRG00000011682snrpf7697.297ENSORLG00015007418snrpf8797.297Oryzias_latipes_hsok
ENSNBRG00000011682snrpf8698.810ENSOMEG00000003018snrpf9998.810Oryzias_melastigma
ENSNBRG00000011682snrpf7695.946ENSOGAG00000030323-8695.946Otolemur_garnettii
ENSNBRG00000011682snrpf8191.139ENSOARG00000011853-6497.297Ovis_aries
ENSNBRG00000011682snrpf8074.359ENSPPAG00000037479-8972.973Pan_paniscus
ENSNBRG00000011682snrpf8578.313ENSPPAG00000037544-8275.676Pan_paniscus
ENSNBRG00000011682snrpf8574.699ENSPPRG00000007449-7674.324Panthera_pardus
ENSNBRG00000011682snrpf8797.647ENSPPRG00000005875-9997.647Panthera_pardus
ENSNBRG00000011682snrpf8797.647ENSPTIG00000007520SNRPF9997.647Panthera_tigris_altaica
ENSNBRG00000011682snrpf8577.108ENSPTIG00000005117-8874.324Panthera_tigris_altaica
ENSNBRG00000011682snrpf8074.359ENSPTRG00000047717-8972.973Pan_troglodytes
ENSNBRG00000011682snrpf8578.313ENSPTRG00000043814-8275.676Pan_troglodytes
ENSNBRG00000011682snrpf9196.629ENSPKIG00000014784snrpf9896.629Paramormyrops_kingsleyae
ENSNBRG00000011682snrpf8897.674ENSPSIG00000016462SNRPF10097.674Pelodiscus_sinensis
ENSNBRG00000011682snrpf8798.824ENSPMGG00000023548snrpf10098.824Periophthalmus_magnuspinnatus
ENSNBRG00000011682snrpf8797.647ENSPEMG00000023326Snrpf9997.647Peromyscus_maniculatus_bairdii
ENSNBRG00000011682snrpf86100.000ENSPLAG00000023932snrpf99100.000Poecilia_latipinna
ENSNBRG00000011682snrpf86100.000ENSPMEG00000003377snrpf99100.000Poecilia_mexicana
ENSNBRG00000011682snrpf86100.000ENSPREG00000022635snrpf97100.000Poecilia_reticulata
ENSNBRG00000011682snrpf8797.647ENSPPYG00000004847-9997.647Pongo_abelii
ENSNBRG00000011682snrpf8797.647ENSPCOG00000023833-9997.647Propithecus_coquereli
ENSNBRG00000011682snrpf8797.647ENSPVAG00000009036SNRPF9997.647Pteropus_vampyrus
ENSNBRG00000011682snrpf86100.000ENSPNYG00000021712snrpf99100.000Pundamilia_nyererei
ENSNBRG00000011682snrpf8698.810ENSPNAG00000019117snrpf9998.810Pygocentrus_nattereri
ENSNBRG00000011682snrpf8797.647ENSRNOG00000005556Snrpf9997.647Rattus_norvegicus
ENSNBRG00000011682snrpf7694.595ENSRBIG00000030414-8694.595Rhinopithecus_bieti
ENSNBRG00000011682snrpf7694.595ENSRROG00000021975-8694.595Rhinopithecus_roxellana
ENSNBRG00000011682snrpf7160.563YPR182WSMX38360.563Saccharomyces_cerevisiae
ENSNBRG00000011682snrpf8797.647ENSSBOG00000036179-9997.647Saimiri_boliviensis_boliviensis
ENSNBRG00000011682snrpf7977.500ENSSBOG00000027638-9077.500Saimiri_boliviensis_boliviensis
ENSNBRG00000011682snrpf7682.432ENSSBOG00000032297-8582.432Saimiri_boliviensis_boliviensis
ENSNBRG00000011682snrpf8796.471ENSSBOG00000012868-9996.471Saimiri_boliviensis_boliviensis
ENSNBRG00000011682snrpf9193.258ENSSHAG00000012294SNRPF8093.258Sarcophilus_harrisii
ENSNBRG00000011682snrpf6895.522ENSSFOG00015021523snrpf10095.522Scleropages_formosus
ENSNBRG00000011682snrpf8798.824ENSSMAG00000005533snrpf9898.824Scophthalmus_maximus
ENSNBRG00000011682snrpf65100.000ENSSDUG00000016283snrpf76100.000Seriola_dumerili
ENSNBRG00000011682snrpf8469.512ENSSLDG00000003885-9372.368Seriola_lalandi_dorsalis
ENSNBRG00000011682snrpf8798.824ENSSLDG00000005119snrpf9998.824Seriola_lalandi_dorsalis
ENSNBRG00000011682snrpf8697.619ENSSPUG00000014590-9997.619Sphenodon_punctatus
ENSNBRG00000011682snrpf9096.591ENSSPAG00000003283snrpf10096.591Stegastes_partitus
ENSNBRG00000011682snrpf8797.647ENSSSCG00000000895SNRPF9997.647Sus_scrofa
ENSNBRG00000011682snrpf7098.551ENSTRUG00000014956snrpf10098.551Takifugu_rubripes
ENSNBRG00000011682snrpf8798.824ENSTNIG00000012672snrpf9998.824Tetraodon_nigroviridis
ENSNBRG00000011682snrpf7670.270ENSTTRG00000006070SNRPF8670.270Tursiops_truncatus
ENSNBRG00000011682snrpf8797.647ENSUAMG00000008176-9997.647Ursus_americanus
ENSNBRG00000011682snrpf8784.706ENSUAMG00000001101-8786.486Ursus_americanus
ENSNBRG00000011682snrpf7686.486ENSUMAG00000006177-8786.486Ursus_maritimus
ENSNBRG00000011682snrpf8797.647ENSUMAG00000003528-9997.647Ursus_maritimus
ENSNBRG00000011682snrpf8797.647ENSVPAG00000008712-9997.647Vicugna_pacos
ENSNBRG00000011682snrpf7989.610ENSVVUG00000023821-9589.189Vulpes_vulpes
ENSNBRG00000011682snrpf7675.000ENSXETG00000021630snrpf8772.368Xenopus_tropicalis
ENSNBRG00000011682snrpf8996.552ENSXCOG00000013860snrpf10096.552Xiphophorus_couchianus
ENSNBRG00000011682snrpf86100.000ENSXMAG00000015448snrpf99100.000Xiphophorus_maculatus

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