EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000011872 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 5685 bases
Position: chrJH422320.1:111134-116818
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000015340	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000015761	-	600	-	ENSNBRP00000015340	199 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000011872's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000011872's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000011872	-	52	33.333	ENSNBRG00000002346	RAP2B	86	33.621
ENSNBRG00000011872	-	58	46.552	ENSNBRG00000008930	si:dkey-16l2.16	55	46.552
ENSNBRG00000011872	-	90	33.333	ENSNBRG00000002684	zgc:101559	84	33.333
ENSNBRG00000011872	-	65	38.760	ENSNBRG00000022702	rab41	61	38.760
ENSNBRG00000011872	-	57	48.673	ENSNBRG00000002726	-	52	48.673
ENSNBRG00000011872	-	56	33.036	ENSNBRG00000016978	rhebl1	60	33.036
ENSNBRG00000011872	-	80	40.361	ENSNBRG00000013507	rab18a	81	40.361
ENSNBRG00000011872	-	58	31.034	ENSNBRG00000023542	arl8bb	60	31.034
ENSNBRG00000011872	-	66	43.939	ENSNBRG00000023898	rab11ba	50	43.939
ENSNBRG00000011872	-	59	53.846	ENSNBRG00000002082	rab30	53	53.846
ENSNBRG00000011872	-	61	37.302	ENSNBRG00000008714	RAB29	55	37.302
ENSNBRG00000011872	-	91	32.663	ENSNBRG00000011607	rab25a	93	32.663
ENSNBRG00000011872	-	64	41.085	ENSNBRG00000022235	rab33a	54	41.085
ENSNBRG00000011872	-	59	40.164	ENSNBRG00000013940	rab9b	55	40.164
ENSNBRG00000011872	-	65	39.394	ENSNBRG00000015905	rab6bb	66	39.394
ENSNBRG00000011872	-	92	36.082	ENSNBRG00000008137	rab18b	94	36.082
ENSNBRG00000011872	-	66	43.939	ENSNBRG00000000372	rab11bb	60	43.939
ENSNBRG00000011872	-	52	33.654	ENSNBRG00000013691	rab23	57	33.898
ENSNBRG00000011872	-	65	40.152	ENSNBRG00000016716	rab6a	63	40.152
ENSNBRG00000011872	-	55	49.091	ENSNBRG00000005082	RAB39B	51	49.091
ENSNBRG00000011872	-	89	35.149	ENSNBRG00000005542	-	93	35.149
ENSNBRG00000011872	-	89	38.021	ENSNBRG00000012893	rab11a	91	38.021
ENSNBRG00000011872	-	60	41.667	ENSNBRG00000018165	rab5c	54	41.667
ENSNBRG00000011872	-	61	33.858	ENSNBRG00000013795	rheb	66	33.858
ENSNBRG00000011872	-	64	38.760	ENSNBRG00000017793	RAB17	57	38.760
ENSNBRG00000011872	-	59	40.164	ENSNBRG00000024340	RAB9A	57	40.164
ENSNBRG00000011872	-	91	39.474	ENSNBRG00000004124	rab13	95	39.474
ENSNBRG00000011872	-	76	41.935	ENSNBRG00000005116	rab11al	69	43.537
ENSNBRG00000011872	-	58	45.690	ENSNBRG00000003873	rab1ba	57	45.690
ENSNBRG00000011872	-	65	39.394	ENSNBRG00000013673	rab6ba	63	39.394
ENSNBRG00000011872	-	56	48.246	ENSNBRG00000018106	-	53	48.246
ENSNBRG00000011872	-	66	43.939	ENSNBRG00000023885	-	60	43.939
ENSNBRG00000011872	-	59	40.164	ENSNBRG00000023214	si:dkey-13a21.4	59	40.164
ENSNBRG00000011872	-	59	42.623	ENSNBRG00000021829	RAB7A	65	42.623
ENSNBRG00000011872	-	58	31.034	ENSNBRG00000018737	arl8ba	60	31.034
ENSNBRG00000011872	-	60	43.333	ENSNBRG00000011763	rab5aa	55	43.333
ENSNBRG00000011872	-	60	43.333	ENSNBRG00000016922	-	53	43.333
ENSNBRG00000011872	-	59	47.899	ENSNBRG00000006202	zgc:171927	56	47.899
ENSNBRG00000011872	-	59	42.500	ENSNBRG00000017996	-	51	42.500
ENSNBRG00000011872	-	61	42.623	ENSNBRG00000002778	RAB15	57	42.623
ENSNBRG00000011872	-	59	42.623	ENSNBRG00000002772	-	58	42.623
ENSNBRG00000011872	-	58	40.000	ENSNBRG00000002825	-	57	40.000
ENSNBRG00000011872	-	56	48.214	ENSNBRG00000020492	-	55	48.214
ENSNBRG00000011872	-	72	44.521	ENSNBRG00000001056	rab15	68	44.521
ENSNBRG00000011872	-	56	49.107	ENSNBRG00000001241	rab2a	52	49.107

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000011872	-	93	67.857	ENSG00000172794	RAB37	91	67.857	Homo_sapiens
ENSNBRG00000011872	-	97	79.798	ENSACIG00000023222	-	89	79.798	Amphilophus_citrinellus
ENSNBRG00000011872	-	93	68.205	ENSCPOG00000025645	RAB37	90	68.205	Cavia_porcellus
ENSNBRG00000011872	-	93	66.667	ENSCLAG00000008913	RAB37	90	66.667	Chinchilla_lanigera
ENSNBRG00000011872	-	99	71.226	ENSCVAG00000014416	-	99	71.226	Cyprinodon_variegatus
ENSNBRG00000011872	-	94	72.680	ENSELUG00000023120	-	95	72.680	Esox_lucius
ENSNBRG00000011872	-	93	67.692	ENSFDAG00000015285	RAB37	90	67.692	Fukomys_damarensis
ENSNBRG00000011872	-	93	73.846	ENSGAFG00000014730	-	97	73.846	Gambusia_affinis
ENSNBRG00000011872	-	93	66.667	ENSHGLG00000004384	RAB37	90	66.667	Heterocephalus_glaber_female
ENSNBRG00000011872	-	93	66.667	ENSHGLG00100012557	-	90	66.667	Heterocephalus_glaber_male
ENSNBRG00000011872	-	91	73.980	ENSLBEG00000027539	-	88	73.980	Labrus_bergylta
ENSNBRG00000011872	-	61	92.623	ENSMAMG00000020286	-	59	92.623	Mastacembelus_armatus
ENSNBRG00000011872	-	93	67.179	MGP_CAROLIEiJ_G0017386	Rab37	90	67.179	Mus_caroli
ENSNBRG00000011872	-	93	67.179	ENSMUSG00000020732	Rab37	90	67.179	Mus_musculus
ENSNBRG00000011872	-	93	67.179	MGP_PahariEiJ_G0018517	Rab37	90	67.179	Mus_pahari
ENSNBRG00000011872	-	93	67.179	MGP_SPRETEiJ_G0018231	Rab37	90	67.179	Mus_spretus
ENSNBRG00000011872	-	92	72.081	ENSORLG00000024558	-	79	72.081	Oryzias_latipes
ENSNBRG00000011872	-	92	72.081	ENSORLG00020015717	-	79	72.081	Oryzias_latipes_hni
ENSNBRG00000011872	-	92	72.589	ENSORLG00015013564	-	97	72.589	Oryzias_latipes_hsok
ENSNBRG00000011872	-	92	72.081	ENSOMEG00000018494	-	79	72.081	Oryzias_melastigma
ENSNBRG00000011872	-	91	68.394	ENSPCIG00000004450	-	89	68.394	Phascolarctos_cinereus
ENSNBRG00000011872	-	92	74.619	ENSPFOG00000019144	-	79	74.619	Poecilia_formosa
ENSNBRG00000011872	-	92	74.619	ENSPFOG00000006314	-	79	74.619	Poecilia_formosa
ENSNBRG00000011872	-	92	74.619	ENSPMEG00000017161	-	79	74.619	Poecilia_mexicana
ENSNBRG00000011872	-	92	74.619	ENSPMEG00000002564	-	79	74.619	Poecilia_mexicana
ENSNBRG00000011872	-	93	69.730	ENSPPYG00000008601	-	89	69.730	Pongo_abelii
ENSNBRG00000011872	-	91	67.358	ENSPNAG00000021675	-	89	67.358	Pygocentrus_nattereri
ENSNBRG00000011872	-	92	74.112	ENSXMAG00000021303	-	82	75.000	Xiphophorus_maculatus