EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000011936 (Gene tree)
Gene ID: -
Gene Symbol: synj1
Alias: fb02f11|fi15a11|no optokinetic response c|nrc|slacker|slak|wu:fb02f11|wu:fi15a11
Full Name: synaptojanin-1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 24278 bases
Position: chrJH422341.1:2329041-2353318
Accession: 102787985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000015691	Exo_endo_phos	PF03372.23	2.4e-12	1	1
ENSNBRP00000015708	Exo_endo_phos	PF03372.23	3.4e-12	1	1
ENSNBRP00000015708	DUF1866	PF08952.11	5.6e-58	1	1
ENSNBRP00000015691	DUF1866	PF08952.11	6.8e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000016133	-	3999	-	ENSNBRP00000015708	1332 (aa)	-	-
ENSNBRT00000016116	-	4518	XM_006800092	ENSNBRP00000015691	1505 (aa)	XP_006800155	-

Gene Model

Click here to download ENSNBRG00000011936's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000011936's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000011936	synj1	95	60.582	ENSG00000159082	SYNJ1	100	82.927	Homo_sapiens
ENSNBRG00000011936	synj1	99	84.207	ENSAPOG00000002809	synj1	99	82.969	Acanthochromis_polyacanthus
ENSNBRG00000011936	synj1	81	70.760	ENSAMEG00000015028	SYNJ1	68	71.855	Ailuropoda_melanoleuca
ENSNBRG00000011936	synj1	100	86.963	ENSACIG00000008857	synj1	99	88.429	Amphilophus_citrinellus
ENSNBRG00000011936	synj1	100	84.615	ENSAOCG00000009835	synj1	99	88.837	Amphiprion_ocellaris
ENSNBRG00000011936	synj1	99	84.716	ENSAPEG00000021010	synj1	100	81.631	Amphiprion_percula
ENSNBRG00000011936	synj1	94	89.615	ENSATEG00000002306	synj1	100	79.358	Anabas_testudineus
ENSNBRG00000011936	synj1	98	57.726	ENSAPLG00000011832	SYNJ1	68	72.227	Anas_platyrhynchos
ENSNBRG00000011936	synj1	81	72.559	ENSACAG00000003006	-	84	73.423	Anolis_carolinensis
ENSNBRG00000011936	synj1	95	59.414	ENSANAG00000027325	SYNJ1	84	71.688	Aotus_nancymaae
ENSNBRG00000011936	synj1	99	91.898	ENSACLG00000002255	synj1	100	91.379	Astatotilapia_calliptera
ENSNBRG00000011936	synj1	94	83.348	ENSAMXG00000008208	synj1	99	72.052	Astyanax_mexicanus
ENSNBRG00000011936	synj1	95	61.968	ENSBTAG00000003063	SYNJ1	83	72.036	Bos_taurus
ENSNBRG00000011936	synj1	99	63.001	ENSCJAG00000009187	SYNJ1	84	71.714	Callithrix_jacchus
ENSNBRG00000011936	synj1	96	64.618	ENSCAFG00000009041	SYNJ1	86	71.429	Canis_familiaris
ENSNBRG00000011936	synj1	96	65.742	ENSCAFG00020025776	SYNJ1	97	63.663	Canis_lupus_dingo
ENSNBRG00000011936	synj1	95	63.193	ENSCHIG00000005095	SYNJ1	72	72.470	Capra_hircus
ENSNBRG00000011936	synj1	99	64.869	ENSTSYG00000014541	SYNJ1	95	66.020	Carlito_syrichta
ENSNBRG00000011936	synj1	74	72.137	ENSCAPG00000014483	SYNJ1	75	72.201	Cavia_aperea
ENSNBRG00000011936	synj1	90	64.569	ENSCPOG00000012182	SYNJ1	83	71.611	Cavia_porcellus
ENSNBRG00000011936	synj1	95	61.286	ENSCCAG00000020825	SYNJ1	84	71.597	Cebus_capucinus
ENSNBRG00000011936	synj1	99	63.350	ENSCATG00000033891	SYNJ1	86	72.470	Cercocebus_atys
ENSNBRG00000011936	synj1	98	59.949	ENSCLAG00000009796	SYNJ1	100	82.302	Chinchilla_lanigera
ENSNBRG00000011936	synj1	81	70.583	ENSCSAG00000009654	SYNJ1	84	71.674	Chlorocebus_sabaeus
ENSNBRG00000011936	synj1	81	71.561	ENSCHOG00000012390	SYNJ1	54	71.642	Choloepus_hoffmanni
ENSNBRG00000011936	synj1	91	65.785	ENSCPBG00000006402	SYNJ1	87	73.028	Chrysemys_picta_bellii
ENSNBRG00000011936	synj1	99	62.836	ENSCANG00000031359	SYNJ1	85	71.674	Colobus_angolensis_palliatus
ENSNBRG00000011936	synj1	95	58.839	ENSCGRG00001010861	Synj1	83	71.662	Cricetulus_griseus_chok1gshd
ENSNBRG00000011936	synj1	81	70.453	ENSCGRG00000015749	Synj1	100	82.158	Cricetulus_griseus_crigri
ENSNBRG00000011936	synj1	90	86.844	ENSCSEG00000019614	synj1	94	87.730	Cynoglossus_semilaevis
ENSNBRG00000011936	synj1	94	87.467	ENSCVAG00000019250	synj1	100	81.121	Cyprinodon_variegatus
ENSNBRG00000011936	synj1	99	73.199	ENSDARG00000025011	synj1	100	78.712	Danio_rerio
ENSNBRG00000011936	synj1	90	60.418	ENSDNOG00000010732	SYNJ1	70	68.739	Dasypus_novemcinctus
ENSNBRG00000011936	synj1	54	79.612	ENSDORG00000014735	-	100	82.590	Dipodomys_ordii
ENSNBRG00000011936	synj1	71	76.703	ENSETEG00000018674	SYNJ1	59	76.703	Echinops_telfairi
ENSNBRG00000011936	synj1	93	70.495	ENSEASG00005006287	SYNJ1	96	74.446	Equus_asinus_asinus
ENSNBRG00000011936	synj1	94	70.387	ENSECAG00000004829	SYNJ1	85	72.436	Equus_caballus
ENSNBRG00000011936	synj1	82	70.074	ENSEEUG00000005150	SYNJ1	58	70.149	Erinaceus_europaeus
ENSNBRG00000011936	synj1	99	73.776	ENSELUG00000009731	synj1	99	72.279	Esox_lucius
ENSNBRG00000011936	synj1	90	65.439	ENSFCAG00000012498	SYNJ1	85	71.584	Felis_catus
ENSNBRG00000011936	synj1	76	51.071	ENSFALG00000004680	SYNJ1	78	53.163	Ficedula_albicollis
ENSNBRG00000011936	synj1	80	71.493	ENSFDAG00000016818	SYNJ1	100	82.734	Fukomys_damarensis
ENSNBRG00000011936	synj1	99	80.546	ENSFHEG00000017689	synj1	99	78.503	Fundulus_heteroclitus
ENSNBRG00000011936	synj1	78	79.054	ENSGMOG00000014852	synj1	80	81.331	Gadus_morhua
ENSNBRG00000011936	synj1	95	65.599	ENSGALG00000034317	SYNJ1	70	72.685	Gallus_gallus
ENSNBRG00000011936	synj1	99	80.781	ENSGAFG00000019466	synj1	100	77.805	Gambusia_affinis
ENSNBRG00000011936	synj1	94	82.337	ENSGACG00000020575	synj1	99	78.399	Gasterosteus_aculeatus
ENSNBRG00000011936	synj1	97	64.797	ENSGAGG00000022523	SYNJ1	99	62.518	Gopherus_agassizii
ENSNBRG00000011936	synj1	95	59.869	ENSGGOG00000015945	SYNJ1	86	72.562	Gorilla_gorilla
ENSNBRG00000011936	synj1	99	91.898	ENSHBUG00000007774	synj1	100	91.379	Haplochromis_burtoni
ENSNBRG00000011936	synj1	96	57.835	ENSHGLG00000006420	SYNJ1	100	82.158	Heterocephalus_glaber_female
ENSNBRG00000011936	synj1	99	61.874	ENSHGLG00100012591	SYNJ1	100	82.158	Heterocephalus_glaber_male
ENSNBRG00000011936	synj1	96	79.185	ENSHCOG00000012774	synj1	96	81.431	Hippocampus_comes
ENSNBRG00000011936	synj1	93	82.722	ENSIPUG00000010691	SYNJ1	99	73.372	Ictalurus_punctatus
ENSNBRG00000011936	synj1	81	71.174	ENSSTOG00000015806	SYNJ1	84	71.765	Ictidomys_tridecemlineatus
ENSNBRG00000011936	synj1	95	56.474	ENSJJAG00000020168	Synj1	69	67.183	Jaculus_jaculus
ENSNBRG00000011936	synj1	99	81.791	ENSKMAG00000004221	synj1	100	80.366	Kryptolebias_marmoratus
ENSNBRG00000011936	synj1	99	81.370	ENSLBEG00000015081	synj1	98	81.216	Labrus_bergylta
ENSNBRG00000011936	synj1	81	70.465	ENSLACG00000005928	SYNJ1	71	72.262	Latimeria_chalumnae
ENSNBRG00000011936	synj1	95	64.958	ENSLOCG00000009230	synj1	74	78.410	Lepisosteus_oculatus
ENSNBRG00000011936	synj1	96	58.767	ENSLAFG00000011806	SYNJ1	69	71.312	Loxodonta_africana
ENSNBRG00000011936	synj1	96	62.754	ENSMFAG00000018883	SYNJ1	83	71.159	Macaca_fascicularis
ENSNBRG00000011936	synj1	95	59.599	ENSMMUG00000004624	SYNJ1	84	71.855	Macaca_mulatta
ENSNBRG00000011936	synj1	99	63.716	ENSMNEG00000040077	SYNJ1	79	71.674	Macaca_nemestrina
ENSNBRG00000011936	synj1	99	63.350	ENSMLEG00000037029	SYNJ1	85	71.674	Mandrillus_leucophaeus
ENSNBRG00000011936	synj1	99	84.307	ENSMAMG00000013404	synj1	100	81.227	Mastacembelus_armatus
ENSNBRG00000011936	synj1	100	89.201	ENSMZEG00005024358	synj1	99	92.852	Maylandia_zebra
ENSNBRG00000011936	synj1	95	63.276	ENSMGAG00000014522	SYNJ1	70	69.711	Meleagris_gallopavo
ENSNBRG00000011936	synj1	99	63.827	ENSMAUG00000009743	Synj1	100	82.302	Mesocricetus_auratus
ENSNBRG00000011936	synj1	97	61.302	ENSMICG00000034953	SYNJ1	86	72.744	Microcebus_murinus
ENSNBRG00000011936	synj1	99	77.616	ENSMMOG00000010203	synj1	99	82.294	Mola_mola
ENSNBRG00000011936	synj1	80	67.687	ENSMODG00000021073	SYNJ1	82	68.727	Monodelphis_domestica
ENSNBRG00000011936	synj1	99	79.173	ENSMALG00000014015	synj1	100	78.040	Monopterus_albus
ENSNBRG00000011936	synj1	97	64.490	MGP_CAROLIEiJ_G0020951	Synj1	100	82.734	Mus_caroli
ENSNBRG00000011936	synj1	97	64.753	ENSMUSG00000022973	Synj1	100	82.734	Mus_musculus
ENSNBRG00000011936	synj1	97	64.459	MGP_PahariEiJ_G0016656	Synj1	100	82.878	Mus_pahari
ENSNBRG00000011936	synj1	97	64.753	MGP_SPRETEiJ_G0021857	Synj1	100	82.878	Mus_spretus
ENSNBRG00000011936	synj1	95	60.592	ENSMPUG00000001153	SYNJ1	70	71.635	Mustela_putorius_furo
ENSNBRG00000011936	synj1	52	77.650	ENSMLUG00000026584	-	99	80.988	Myotis_lucifugus
ENSNBRG00000011936	synj1	57	51.553	ENSMLUG00000005764	-	55	64.334	Myotis_lucifugus
ENSNBRG00000011936	synj1	81	70.536	ENSNGAG00000000453	Synj1	100	82.590	Nannospalax_galili
ENSNBRG00000011936	synj1	83	60.407	ENSNLEG00000003734	SYNJ1	90	65.851	Nomascus_leucogenys
ENSNBRG00000011936	synj1	72	69.272	ENSMEUG00000004158	-	61	72.626	Notamacropus_eugenii
ENSNBRG00000011936	synj1	86	76.357	ENSOPRG00000013602	SYNJ1	60	76.357	Ochotona_princeps
ENSNBRG00000011936	synj1	54	79.334	ENSODEG00000002409	-	100	82.302	Octodon_degus
ENSNBRG00000011936	synj1	99	83.960	ENSONIG00000004667	synj1	100	87.552	Oreochromis_niloticus
ENSNBRG00000011936	synj1	78	69.006	ENSOANG00000006929	SYNJ1	69	70.516	Ornithorhynchus_anatinus
ENSNBRG00000011936	synj1	95	58.119	ENSOCUG00000001420	SYNJ1	67	73.180	Oryctolagus_cuniculus
ENSNBRG00000011936	synj1	94	85.244	ENSORLG00000004320	synj1	100	82.635	Oryzias_latipes
ENSNBRG00000011936	synj1	100	79.622	ENSORLG00020011994	synj1	98	82.205	Oryzias_latipes_hni
ENSNBRG00000011936	synj1	94	85.855	ENSORLG00015018077	synj1	95	78.554	Oryzias_latipes_hsok
ENSNBRG00000011936	synj1	99	81.898	ENSOMEG00000014322	synj1	99	82.282	Oryzias_melastigma
ENSNBRG00000011936	synj1	95	58.044	ENSOGAG00000006010	SYNJ1	68	68.592	Otolemur_garnettii
ENSNBRG00000011936	synj1	95	59.883	ENSOARG00000013414	SYNJ1	68	70.848	Ovis_aries
ENSNBRG00000011936	synj1	95	60.594	ENSPPAG00000026784	SYNJ1	85	71.765	Pan_paniscus
ENSNBRG00000011936	synj1	90	65.349	ENSPPRG00000023469	SYNJ1	85	71.584	Panthera_pardus
ENSNBRG00000011936	synj1	90	65.420	ENSPTIG00000007930	SYNJ1	85	71.674	Panthera_tigris_altaica
ENSNBRG00000011936	synj1	95	59.572	ENSPTRG00000023787	SYNJ1	86	72.562	Pan_troglodytes
ENSNBRG00000011936	synj1	95	60.594	ENSPTRG00000048135	-	86	72.562	Pan_troglodytes
ENSNBRG00000011936	synj1	99	63.350	ENSPANG00000022531	SYNJ1	85	71.674	Papio_anubis
ENSNBRG00000011936	synj1	81	80.322	ENSPKIG00000022603	synj1	89	81.393	Paramormyrops_kingsleyae
ENSNBRG00000011936	synj1	99	81.971	ENSPMGG00000016831	synj1	93	81.409	Periophthalmus_magnuspinnatus
ENSNBRG00000011936	synj1	99	64.894	ENSPEMG00000018767	Synj1	100	83.022	Peromyscus_maniculatus_bairdii
ENSNBRG00000011936	synj1	76	54.460	ENSPMAG00000002887	synj1	74	57.186	Petromyzon_marinus
ENSNBRG00000011936	synj1	97	62.777	ENSPCIG00000016372	SYNJ1	82	71.996	Phascolarctos_cinereus
ENSNBRG00000011936	synj1	99	78.251	ENSPFOG00000016886	synj1	100	83.749	Poecilia_formosa
ENSNBRG00000011936	synj1	99	80.574	ENSPLAG00000017559	synj1	100	82.851	Poecilia_latipinna
ENSNBRG00000011936	synj1	99	82.240	ENSPMEG00000007643	synj1	100	77.082	Poecilia_mexicana
ENSNBRG00000011936	synj1	99	81.140	ENSPREG00000012412	synj1	100	83.271	Poecilia_reticulata
ENSNBRG00000011936	synj1	81	70.406	ENSPPYG00000011365	SYNJ1	79	71.493	Pongo_abelii
ENSNBRG00000011936	synj1	66	81.429	ENSPCAG00000009906	SYNJ1	58	81.429	Procavia_capensis
ENSNBRG00000011936	synj1	88	76.131	ENSPCOG00000024841	SYNJ1	81	70.862	Propithecus_coquereli
ENSNBRG00000011936	synj1	74	78.150	ENSPVAG00000000892	SYNJ1	62	80.972	Pteropus_vampyrus
ENSNBRG00000011936	synj1	100	92.993	ENSPNYG00000022989	synj1	100	92.993	Pundamilia_nyererei
ENSNBRG00000011936	synj1	81	83.706	ENSPNAG00000021119	synj1	91	84.804	Pygocentrus_nattereri
ENSNBRG00000011936	synj1	96	65.282	ENSRNOG00000002051	Synj1	85	72.257	Rattus_norvegicus
ENSNBRG00000011936	synj1	99	61.724	ENSRBIG00000034477	SYNJ1	85	71.584	Rhinopithecus_bieti
ENSNBRG00000011936	synj1	99	62.836	ENSRROG00000039256	SYNJ1	85	71.674	Rhinopithecus_roxellana
ENSNBRG00000011936	synj1	99	62.709	ENSSBOG00000021001	SYNJ1	84	71.688	Saimiri_boliviensis_boliviensis
ENSNBRG00000011936	synj1	95	57.830	ENSSHAG00000008538	SYNJ1	70	72.004	Sarcophilus_harrisii
ENSNBRG00000011936	synj1	94	82.458	ENSSFOG00015006095	synj1	100	73.178	Scleropages_formosus
ENSNBRG00000011936	synj1	100	80.331	ENSSMAG00000018066	synj1	98	83.723	Scophthalmus_maximus
ENSNBRG00000011936	synj1	99	84.974	ENSSDUG00000013058	synj1	100	81.669	Seriola_dumerili
ENSNBRG00000011936	synj1	99	84.391	ENSSLDG00000021406	synj1	100	86.409	Seriola_lalandi_dorsalis
ENSNBRG00000011936	synj1	93	66.459	ENSSPUG00000012552	SYNJ1	71	73.028	Sphenodon_punctatus
ENSNBRG00000011936	synj1	94	86.318	ENSSPAG00000006812	SYNJ1	100	81.801	Stegastes_partitus
ENSNBRG00000011936	synj1	100	85.127	ENSSPAG00000017029	synj1	100	85.127	Stegastes_partitus
ENSNBRG00000011936	synj1	99	62.259	ENSSSCG00000012035	SYNJ1	85	71.235	Sus_scrofa
ENSNBRG00000011936	synj1	96	62.084	ENSTGUG00000013445	SYNJ1	83	59.482	Taeniopygia_guttata
ENSNBRG00000011936	synj1	99	77.878	ENSTRUG00000006907	synj1	97	81.356	Takifugu_rubripes
ENSNBRG00000011936	synj1	95	81.420	ENSTNIG00000009940	synj1	91	81.299	Tetraodon_nigroviridis
ENSNBRG00000011936	synj1	82	83.117	ENSTBEG00000016298	SYNJ1	56	83.117	Tupaia_belangeri
ENSNBRG00000011936	synj1	92	76.554	ENSTTRG00000002222	SYNJ1	66	76.554	Tursiops_truncatus
ENSNBRG00000011936	synj1	90	63.529	ENSUAMG00000018606	SYNJ1	98	75.553	Ursus_americanus
ENSNBRG00000011936	synj1	96	65.030	ENSUMAG00000018419	SYNJ1	99	75.212	Ursus_maritimus
ENSNBRG00000011936	synj1	86	81.429	ENSVPAG00000001241	SYNJ1	71	81.429	Vicugna_pacos
ENSNBRG00000011936	synj1	90	63.354	ENSVVUG00000023125	SYNJ1	84	71.674	Vulpes_vulpes
ENSNBRG00000011936	synj1	95	57.979	ENSXETG00000009899	synj1	69	70.063	Xenopus_tropicalis
ENSNBRG00000011936	synj1	99	82.117	ENSXCOG00000011896	synj1	99	85.023	Xiphophorus_couchianus
ENSNBRG00000011936	synj1	99	80.744	ENSXMAG00000017524	synj1	100	83.572	Xiphophorus_maculatus