EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000012006 (Gene tree)
Gene ID: -
Gene Symbol: rnf17
Alias: TDRD4|im:7147535|wu:fj98c04
Full Name: RING finger protein 17-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 23328 bases
Position: chrJH422302.1:556179-579506
Accession: 102775828
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000015559	TUDOR	PF00567.24	1.9e-76	1	5
ENSNBRP00000015559	TUDOR	PF00567.24	1.9e-76	2	5
ENSNBRP00000015559	TUDOR	PF00567.24	1.9e-76	3	5
ENSNBRP00000015559	TUDOR	PF00567.24	1.9e-76	4	5
ENSNBRP00000015559	TUDOR	PF00567.24	1.9e-76	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000015982	-	3672	XM_006793627	ENSNBRP00000015559	1223 (aa)	XP_006793690	-

Gene Model

Click here to download ENSNBRG00000012006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000012006's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000012006	rnf17	82	36.248	ENSG00000132972	RNF17	99	41.593	Homo_sapiens
ENSNBRG00000012006	rnf17	86	69.722	ENSAPOG00000017034	rnf17	85	69.829	Acanthochromis_polyacanthus
ENSNBRG00000012006	rnf17	82	35.638	ENSAMEG00000017340	RNF17	74	35.734	Ailuropoda_melanoleuca
ENSNBRG00000012006	rnf17	92	71.603	ENSAOCG00000018283	rnf17	79	72.147	Amphiprion_ocellaris
ENSNBRG00000012006	rnf17	100	62.632	ENSAPEG00000022338	rnf17	99	62.632	Amphiprion_percula
ENSNBRG00000012006	rnf17	86	62.581	ENSATEG00000002067	rnf17	83	62.581	Anabas_testudineus
ENSNBRG00000012006	rnf17	87	31.296	ENSAPLG00000003969	RNF17	83	31.296	Anas_platyrhynchos
ENSNBRG00000012006	rnf17	87	33.694	ENSACAG00000001418	RNF17	75	33.694	Anolis_carolinensis
ENSNBRG00000012006	rnf17	79	33.858	ENSANAG00000029969	RNF17	93	30.476	Aotus_nancymaae
ENSNBRG00000012006	rnf17	96	82.187	ENSACLG00000018279	rnf17	80	82.187	Astatotilapia_calliptera
ENSNBRG00000012006	rnf17	97	46.542	ENSAMXG00000011002	rnf17	91	45.462	Astyanax_mexicanus
ENSNBRG00000012006	rnf17	50	34.446	ENSBTAG00000000278	RNF17	99	34.446	Bos_taurus
ENSNBRG00000012006	rnf17	82	36.415	ENSCJAG00000018937	RNF17	99	35.627	Callithrix_jacchus
ENSNBRG00000012006	rnf17	79	36.418	ENSCAFG00000007418	RNF17	69	36.527	Canis_familiaris
ENSNBRG00000012006	rnf17	69	35.000	ENSCAFG00020002919	-	99	35.156	Canis_lupus_dingo
ENSNBRG00000012006	rnf17	84	35.054	ENSCHIG00000026716	RNF17	99	34.644	Capra_hircus
ENSNBRG00000012006	rnf17	83	36.338	ENSTSYG00000000365	RNF17	99	36.157	Carlito_syrichta
ENSNBRG00000012006	rnf17	82	30.874	ENSCAPG00000012908	RNF17	89	30.874	Cavia_aperea
ENSNBRG00000012006	rnf17	84	35.403	ENSCCAG00000026725	RNF17	99	35.152	Cebus_capucinus
ENSNBRG00000012006	rnf17	82	36.248	ENSCATG00000040352	RNF17	99	35.455	Cercocebus_atys
ENSNBRG00000012006	rnf17	82	36.080	ENSCLAG00000004127	RNF17	74	36.364	Chinchilla_lanigera
ENSNBRG00000012006	rnf17	82	36.389	ENSCSAG00000018019	RNF17	74	36.248	Chlorocebus_sabaeus
ENSNBRG00000012006	rnf17	99	31.356	ENSCPBG00000020920	RNF17	94	31.144	Chrysemys_picta_bellii
ENSNBRG00000012006	rnf17	82	36.389	ENSCANG00000032927	RNF17	99	35.426	Colobus_angolensis_palliatus
ENSNBRG00000012006	rnf17	82	36.436	ENSCGRG00001022658	Rnf17	73	36.436	Cricetulus_griseus_chok1gshd
ENSNBRG00000012006	rnf17	82	36.436	ENSCGRG00000009924	Rnf17	73	36.436	Cricetulus_griseus_crigri
ENSNBRG00000012006	rnf17	97	55.017	ENSCSEG00000008626	rnf17	92	55.017	Cynoglossus_semilaevis
ENSNBRG00000012006	rnf17	94	51.204	ENSCVAG00000017008	rnf17	100	51.204	Cyprinodon_variegatus
ENSNBRG00000012006	rnf17	95	46.363	ENSDARG00000056387	rnf17	81	46.363	Danio_rerio
ENSNBRG00000012006	rnf17	83	35.977	ENSDNOG00000006115	RNF17	74	35.977	Dasypus_novemcinctus
ENSNBRG00000012006	rnf17	50	35.385	ENSEASG00005001421	-	99	35.385	Equus_asinus_asinus
ENSNBRG00000012006	rnf17	82	36.402	ENSECAG00000017152	RNF17	72	36.402	Equus_caballus
ENSNBRG00000012006	rnf17	62	30.472	ENSEEUG00000000332	RNF17	56	30.472	Erinaceus_europaeus
ENSNBRG00000012006	rnf17	92	48.996	ENSELUG00000005626	rnf17	78	48.996	Esox_lucius
ENSNBRG00000012006	rnf17	85	35.561	ENSFCAG00000004914	RNF17	99	35.410	Felis_catus
ENSNBRG00000012006	rnf17	97	34.332	ENSFALG00000008766	RNF17	88	34.332	Ficedula_albicollis
ENSNBRG00000012006	rnf17	81	35.277	ENSFDAG00000017857	RNF17	73	35.562	Fukomys_damarensis
ENSNBRG00000012006	rnf17	91	67.028	ENSFHEG00000014822	rnf17	78	67.028	Fundulus_heteroclitus
ENSNBRG00000012006	rnf17	81	42.315	ENSGMOG00000015560	-	100	42.315	Gadus_morhua
ENSNBRG00000012006	rnf17	51	39.035	ENSGALG00000045414	-	98	39.035	Gallus_gallus
ENSNBRG00000012006	rnf17	99	55.665	ENSGAFG00000004463	rnf17	99	54.965	Gambusia_affinis
ENSNBRG00000012006	rnf17	60	54.070	ENSGACG00000001340	-	100	54.070	Gasterosteus_aculeatus
ENSNBRG00000012006	rnf17	86	34.146	ENSGAGG00000016999	RNF17	70	34.146	Gopherus_agassizii
ENSNBRG00000012006	rnf17	82	36.248	ENSGGOG00000014491	RNF17	99	35.758	Gorilla_gorilla
ENSNBRG00000012006	rnf17	96	82.436	ENSHBUG00000003554	rnf17	80	82.436	Haplochromis_burtoni
ENSNBRG00000012006	rnf17	85	35.286	ENSHGLG00000007270	RNF17	73	36.085	Heterocephalus_glaber_female
ENSNBRG00000012006	rnf17	85	35.286	ENSHGLG00100017393	RNF17	74	36.085	Heterocephalus_glaber_male
ENSNBRG00000012006	rnf17	99	45.644	ENSHCOG00000017676	rnf17	99	45.644	Hippocampus_comes
ENSNBRG00000012006	rnf17	93	52.707	ENSIPUG00000001087	rnf17	86	52.707	Ictalurus_punctatus
ENSNBRG00000012006	rnf17	82	36.148	ENSJJAG00000016584	Rnf17	73	36.148	Jaculus_jaculus
ENSNBRG00000012006	rnf17	94	63.844	ENSKMAG00000013403	rnf17	82	64.268	Kryptolebias_marmoratus
ENSNBRG00000012006	rnf17	85	58.241	ENSLBEG00000014910	rnf17	78	58.900	Labrus_bergylta
ENSNBRG00000012006	rnf17	64	37.696	ENSLACG00000000323	RNF17	81	37.696	Latimeria_chalumnae
ENSNBRG00000012006	rnf17	87	38.448	ENSLOCG00000010768	rnf17	74	38.448	Lepisosteus_oculatus
ENSNBRG00000012006	rnf17	82	36.389	ENSMFAG00000032388	RNF17	99	35.606	Macaca_fascicularis
ENSNBRG00000012006	rnf17	82	36.389	ENSMMUG00000014610	RNF17	99	35.606	Macaca_mulatta
ENSNBRG00000012006	rnf17	82	36.389	ENSMNEG00000011234	RNF17	99	35.606	Macaca_nemestrina
ENSNBRG00000012006	rnf17	82	36.415	ENSMLEG00000030227	RNF17	78	35.100	Mandrillus_leucophaeus
ENSNBRG00000012006	rnf17	100	57.975	ENSMAMG00000020403	rnf17	100	57.975	Mastacembelus_armatus
ENSNBRG00000012006	rnf17	96	82.436	ENSMZEG00005019166	rnf17	80	82.436	Maylandia_zebra
ENSNBRG00000012006	rnf17	87	33.663	ENSMGAG00000015138	RNF17	96	33.663	Meleagris_gallopavo
ENSNBRG00000012006	rnf17	87	34.008	ENSMAUG00000004788	Rnf17	73	34.008	Mesocricetus_auratus
ENSNBRG00000012006	rnf17	85	34.677	ENSMICG00000010364	RNF17	99	35.250	Microcebus_murinus
ENSNBRG00000012006	rnf17	52	36.234	ENSMOCG00000011818	-	81	36.234	Microtus_ochrogaster
ENSNBRG00000012006	rnf17	100	58.192	ENSMMOG00000019514	rnf17	100	58.462	Mola_mola
ENSNBRG00000012006	rnf17	85	36.658	ENSMODG00000007827	RNF17	72	36.523	Monodelphis_domestica
ENSNBRG00000012006	rnf17	87	62.875	ENSMALG00000016943	rnf17	82	62.875	Monopterus_albus
ENSNBRG00000012006	rnf17	82	36.148	MGP_CAROLIEiJ_G0019337	Rnf17	73	36.148	Mus_caroli
ENSNBRG00000012006	rnf17	82	36.148	ENSMUSG00000000365	Rnf17	73	36.148	Mus_musculus
ENSNBRG00000012006	rnf17	83	35.369	MGP_PahariEiJ_G0030355	Rnf17	73	35.369	Mus_pahari
ENSNBRG00000012006	rnf17	82	36.412	MGP_SPRETEiJ_G0020228	Rnf17	73	36.412	Mus_spretus
ENSNBRG00000012006	rnf17	81	36.222	ENSMPUG00000013305	RNF17	74	35.938	Mustela_putorius_furo
ENSNBRG00000012006	rnf17	82	35.894	ENSMLUG00000003903	RNF17	74	36.034	Myotis_lucifugus
ENSNBRG00000012006	rnf17	87	33.499	ENSNGAG00000013553	Rnf17	73	33.499	Nannospalax_galili
ENSNBRG00000012006	rnf17	82	35.411	ENSNLEG00000013780	RNF17	99	35.008	Nomascus_leucogenys
ENSNBRG00000012006	rnf17	68	32.087	ENSODEG00000005443	-	97	32.866	Octodon_degus
ENSNBRG00000012006	rnf17	97	87.973	ENSONIG00000015746	rnf17	100	89.891	Oreochromis_niloticus
ENSNBRG00000012006	rnf17	85	34.759	ENSOCUG00000007384	RNF17	73	34.574	Oryctolagus_cuniculus
ENSNBRG00000012006	rnf17	91	59.777	ENSORLG00000012818	rnf17	90	59.777	Oryzias_latipes
ENSNBRG00000012006	rnf17	91	58.939	ENSORLG00020009879	-	80	58.939	Oryzias_latipes_hni
ENSNBRG00000012006	rnf17	91	58.939	ENSORLG00015013027	-	80	58.939	Oryzias_latipes_hsok
ENSNBRG00000012006	rnf17	92	51.102	ENSOMEG00000009891	rnf17	99	51.305	Oryzias_melastigma
ENSNBRG00000012006	rnf17	82	34.667	ENSOGAG00000014803	RNF17	74	34.667	Otolemur_garnettii
ENSNBRG00000012006	rnf17	84	34.865	ENSOARG00000014641	RNF17	74	35.099	Ovis_aries
ENSNBRG00000012006	rnf17	82	36.261	ENSPPAG00000028779	RNF17	99	35.769	Pan_paniscus
ENSNBRG00000012006	rnf17	85	35.829	ENSPPRG00000009230	RNF17	99	35.410	Panthera_pardus
ENSNBRG00000012006	rnf17	85	35.829	ENSPTIG00000001738	RNF17	99	35.410	Panthera_tigris_altaica
ENSNBRG00000012006	rnf17	82	36.261	ENSPTRG00000005713	RNF17	99	35.769	Pan_troglodytes
ENSNBRG00000012006	rnf17	82	36.389	ENSPANG00000007640	RNF17	99	35.455	Papio_anubis
ENSNBRG00000012006	rnf17	85	48.291	ENSPKIG00000001648	rnf17	90	48.291	Paramormyrops_kingsleyae
ENSNBRG00000012006	rnf17	87	33.580	ENSPSIG00000011245	RNF17	99	33.580	Pelodiscus_sinensis
ENSNBRG00000012006	rnf17	82	36.040	ENSPEMG00000008693	Rnf17	73	32.890	Peromyscus_maniculatus_bairdii
ENSNBRG00000012006	rnf17	80	36.017	ENSPCIG00000009190	-	91	35.343	Phascolarctos_cinereus
ENSNBRG00000012006	rnf17	91	70.175	ENSPFOG00000007124	rnf17	78	70.175	Poecilia_formosa
ENSNBRG00000012006	rnf17	90	70.312	ENSPLAG00000006198	rnf17	78	70.312	Poecilia_latipinna
ENSNBRG00000012006	rnf17	91	70.312	ENSPMEG00000022432	rnf17	82	70.312	Poecilia_mexicana
ENSNBRG00000012006	rnf17	91	69.231	ENSPREG00000001414	rnf17	94	57.887	Poecilia_reticulata
ENSNBRG00000012006	rnf17	82	36.068	ENSPPYG00000005215	RNF17	74	36.068	Pongo_abelii
ENSNBRG00000012006	rnf17	85	47.059	ENSPVAG00000013021	RNF17	72	47.059	Pteropus_vampyrus
ENSNBRG00000012006	rnf17	97	53.485	ENSPNAG00000027505	rnf17	91	53.770	Pygocentrus_nattereri
ENSNBRG00000012006	rnf17	82	35.938	ENSRNOG00000008059	Rnf17	73	35.977	Rattus_norvegicus
ENSNBRG00000012006	rnf17	82	35.345	ENSRBIG00000027010	RNF17	78	35.345	Rhinopithecus_bieti
ENSNBRG00000012006	rnf17	82	36.492	ENSRROG00000022801	RNF17	99	35.714	Rhinopithecus_roxellana
ENSNBRG00000012006	rnf17	85	35.979	ENSSBOG00000021661	RNF17	99	35.606	Saimiri_boliviensis_boliviensis
ENSNBRG00000012006	rnf17	85	36.290	ENSSHAG00000005609	RNF17	73	36.156	Sarcophilus_harrisii
ENSNBRG00000012006	rnf17	89	42.931	ENSSFOG00015023037	rnf17	91	42.931	Scleropages_formosus
ENSNBRG00000012006	rnf17	83	68.564	ENSSMAG00000007429	rnf17	80	68.564	Scophthalmus_maximus
ENSNBRG00000012006	rnf17	84	68.750	ENSSDUG00000013530	rnf17	82	68.750	Seriola_dumerili
ENSNBRG00000012006	rnf17	86	62.338	ENSSLDG00000019577	rnf17	80	62.338	Seriola_lalandi_dorsalis
ENSNBRG00000012006	rnf17	78	33.488	ENSSARG00000003016	RNF17	62	33.488	Sorex_araneus
ENSNBRG00000012006	rnf17	85	35.734	ENSSPUG00000008917	RNF17	79	35.493	Sphenodon_punctatus
ENSNBRG00000012006	rnf17	83	69.468	ENSSPAG00000001925	rnf17	82	69.468	Stegastes_partitus
ENSNBRG00000012006	rnf17	81	36.559	ENSSSCG00000009572	RNF17	82	36.158	Sus_scrofa
ENSNBRG00000012006	rnf17	79	34.052	ENSTGUG00000011267	-	100	34.052	Taeniopygia_guttata
ENSNBRG00000012006	rnf17	92	51.724	ENSTRUG00000015498	rnf17	82	51.724	Takifugu_rubripes
ENSNBRG00000012006	rnf17	84	55.726	ENSTNIG00000015681	rnf17	99	55.726	Tetraodon_nigroviridis
ENSNBRG00000012006	rnf17	71	39.004	ENSTBEG00000000282	RNF17	59	39.004	Tupaia_belangeri
ENSNBRG00000012006	rnf17	76	37.344	ENSTTRG00000012698	RNF17	62	37.344	Tursiops_truncatus
ENSNBRG00000012006	rnf17	69	34.056	ENSUMAG00000013953	-	99	34.056	Ursus_maritimus
ENSNBRG00000012006	rnf17	81	37.375	ENSVVUG00000006226	RNF17	75	37.518	Vulpes_vulpes
ENSNBRG00000012006	rnf17	78	35.615	ENSXETG00000034020	RNF17	100	39.259	Xenopus_tropicalis
ENSNBRG00000012006	rnf17	87	60.571	ENSXCOG00000018295	rnf17	88	57.300	Xiphophorus_couchianus
ENSNBRG00000012006	rnf17	87	61.180	ENSXMAG00000014747	rnf17	82	71.875	Xiphophorus_maculatus