EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000012007 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 7167 bases
Position: chrJH422323.1:3110924-3118090
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000015489	RVT_1	PF00078.27	3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000015912	-	477	-	ENSNBRP00000015489	158 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000012007's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000012007's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000012007	-	77	42.063	ENSNBRG00000001191	-	67	42.063
ENSNBRG00000012007	-	76	53.719	ENSNBRG00000024357	-	68	53.719
ENSNBRG00000012007	-	89	39.041	ENSNBRG00000021767	-	60	39.437

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000012007	-	77	46.281	ENSAPEG00000007794	-	59	46.281	Amphiprion_percula
ENSNBRG00000012007	-	76	44.628	ENSACLG00000015452	-	64	44.628	Astatotilapia_calliptera
ENSNBRG00000012007	-	73	43.966	ENSACLG00000011781	-	64	43.966	Astatotilapia_calliptera
ENSNBRG00000012007	-	86	46.715	ENSCVAG00000018200	-	88	46.715	Cyprinodon_variegatus
ENSNBRG00000012007	-	82	38.686	ENSHBUG00000020518	-	59	38.686	Haplochromis_burtoni
ENSNBRG00000012007	-	73	52.991	ENSHBUG00000023310	-	54	52.991	Haplochromis_burtoni
ENSNBRG00000012007	-	76	46.667	ENSIPUG00000017061	-	53	46.667	Ictalurus_punctatus
ENSNBRG00000012007	-	77	50.000	ENSMAMG00000019150	-	57	50.000	Mastacembelus_armatus
ENSNBRG00000012007	-	50	45.570	ENSMAMG00000017010	-	52	46.835	Mastacembelus_armatus
ENSNBRG00000012007	-	84	47.761	ENSMZEG00005015165	-	75	47.761	Maylandia_zebra
ENSNBRG00000012007	-	64	45.545	ENSMZEG00005007816	-	51	45.545	Maylandia_zebra
ENSNBRG00000012007	-	75	37.815	ENSMMOG00000020155	-	68	37.190	Mola_mola
ENSNBRG00000012007	-	76	45.000	ENSMALG00000000917	-	57	45.000	Monopterus_albus
ENSNBRG00000012007	-	76	43.333	ENSMALG00000006417	-	69	43.333	Monopterus_albus
ENSNBRG00000012007	-	76	44.167	ENSMALG00000015013	-	52	44.167	Monopterus_albus
ENSNBRG00000012007	-	75	33.898	ENSORLG00000027612	-	56	33.898	Oryzias_latipes
ENSNBRG00000012007	-	63	41.000	ENSORLG00000022855	-	50	41.000	Oryzias_latipes
ENSNBRG00000012007	-	90	34.177	ENSORLG00000024000	-	56	34.177	Oryzias_latipes
ENSNBRG00000012007	-	82	41.221	ENSORLG00000022033	-	60	41.221	Oryzias_latipes
ENSNBRG00000012007	-	76	58.333	ENSORLG00020018147	-	52	58.333	Oryzias_latipes_hni
ENSNBRG00000012007	-	76	48.760	ENSORLG00020012794	-	50	48.760	Oryzias_latipes_hni
ENSNBRG00000012007	-	73	43.966	ENSORLG00020001640	-	57	43.966	Oryzias_latipes_hni
ENSNBRG00000012007	-	77	39.669	ENSPMGG00000001725	-	59	39.669	Periophthalmus_magnuspinnatus
ENSNBRG00000012007	-	76	45.833	ENSPNYG00000022945	-	65	45.833	Pundamilia_nyererei
ENSNBRG00000012007	-	77	48.361	ENSPNYG00000006290	-	58	48.361	Pundamilia_nyererei
ENSNBRG00000012007	-	77	57.377	ENSPNAG00000024994	-	76	57.377	Pygocentrus_nattereri
ENSNBRG00000012007	-	62	51.020	ENSSDUG00000006485	-	53	51.020	Seriola_dumerili
ENSNBRG00000012007	-	63	46.535	ENSXETG00000031733	-	61	46.535	Xenopus_tropicalis
ENSNBRG00000012007	-	72	39.831	ENSXCOG00000003154	-	77	40.000	Xiphophorus_couchianus