EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000012039 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ataxin-2-like protein-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 9413 bases
Position: chrJH422419.1:356256-365668
Accession: 102797898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000015582	PAM2	PF07145.15	1.8e-05	1	1
ENSNBRP00000015582	LsmAD	PF06741.13	8.3e-15	1	1
ENSNBRP00000015582	SM-ATX	PF14438.6	2.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000016005	-	2742	XM_006805703	ENSNBRP00000015582	914 (aa)	XP_006805766	-

Gene Model

Click here to download ENSNBRG00000012039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000012039's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000012039	-	54	50.284	ENSNBRG00000020833	-	97	47.805
ENSNBRG00000012039	-	64	51.254	ENSNBRG00000015794	atxn2	71	51.254

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000012039	-	55	47.137	ENSG00000168488	ATXN2L	100	65.957	Homo_sapiens
ENSNBRG00000012039	-	96	46.254	ENSAPOG00000010103	atxn2l	95	53.053	Acanthochromis_polyacanthus
ENSNBRG00000012039	-	97	84.956	ENSAPOG00000021412	-	92	89.710	Acanthochromis_polyacanthus
ENSNBRG00000012039	-	95	46.723	ENSACIG00000024435	atxn2l	98	50.522	Amphilophus_citrinellus
ENSNBRG00000012039	-	93	82.462	ENSACIG00000014731	-	99	82.659	Amphilophus_citrinellus
ENSNBRG00000012039	-	100	73.120	ENSAOCG00000002581	-	92	89.737	Amphiprion_ocellaris
ENSNBRG00000012039	-	59	86.372	ENSAPEG00000011038	-	93	89.474	Amphiprion_percula
ENSNBRG00000012039	-	59	84.547	ENSATEG00000019382	-	93	88.802	Anabas_testudineus
ENSNBRG00000012039	-	55	51.210	ENSATEG00000017689	atxn2l	95	49.390	Anabas_testudineus
ENSNBRG00000012039	-	59	95.560	ENSACLG00000009975	-	90	98.148	Astatotilapia_calliptera
ENSNBRG00000012039	-	71	49.267	ENSCPBG00000003859	ATXN2L	57	57.741	Chrysemys_picta_bellii
ENSNBRG00000012039	-	84	63.322	ENSEASG00005014992	ATXN2L	87	63.322	Equus_asinus_asinus
ENSNBRG00000012039	-	55	62.712	ENSGMOG00000000316	atxn2l	92	63.559	Gadus_morhua
ENSNBRG00000012039	-	57	79.083	ENSGAFG00000019364	-	73	79.083	Gambusia_affinis
ENSNBRG00000012039	-	85	60.328	ENSGAGG00000006078	ATXN2L	66	62.544	Gopherus_agassizii
ENSNBRG00000012039	-	59	95.382	ENSHBUG00000007997	-	90	97.884	Haplochromis_burtoni
ENSNBRG00000012039	-	91	85.389	ENSHCOG00000017587	-	100	85.389	Hippocampus_comes
ENSNBRG00000012039	-	59	59.826	ENSIPUG00000001761	atxn2l	53	58.221	Ictalurus_punctatus
ENSNBRG00000012039	-	95	42.974	ENSJJAG00000005629	Atxn2l	63	62.182	Jaculus_jaculus
ENSNBRG00000012039	-	55	83.852	ENSKMAG00000021450	-	53	80.515	Kryptolebias_marmoratus
ENSNBRG00000012039	-	99	84.697	ENSMAMG00000013005	-	89	85.752	Mastacembelus_armatus
ENSNBRG00000012039	-	59	95.560	ENSMZEG00005013869	-	90	98.148	Maylandia_zebra
ENSNBRG00000012039	-	95	75.623	ENSMMOG00000001440	-	97	76.923	Mola_mola
ENSNBRG00000012039	-	95	76.617	ENSMALG00000008430	-	94	77.072	Monopterus_albus
ENSNBRG00000012039	-	93	45.386	MGP_CAROLIEiJ_G0030450	Atxn2l	76	69.048	Mus_caroli
ENSNBRG00000012039	-	92	44.361	ENSMUSG00000032637	Atxn2l	76	69.048	Mus_musculus
ENSNBRG00000012039	-	92	46.053	MGP_SPRETEiJ_G0031564	Atxn2l	76	69.048	Mus_spretus
ENSNBRG00000012039	-	66	62.182	ENSNGAG00000021446	Atxn2l	61	62.182	Nannospalax_galili
ENSNBRG00000012039	-	55	51.402	ENSONIG00000009388	atxn2l	95	49.343	Oreochromis_niloticus
ENSNBRG00000012039	-	57	94.862	ENSONIG00000011478	-	90	97.354	Oreochromis_niloticus
ENSNBRG00000012039	-	59	79.965	ENSORLG00000006059	-	89	85.450	Oryzias_latipes
ENSNBRG00000012039	-	100	83.641	ENSOMEG00000021118	-	97	75.073	Oryzias_melastigma
ENSNBRG00000012039	-	55	63.853	ENSPKIG00000018462	-	95	59.448	Paramormyrops_kingsleyae
ENSNBRG00000012039	-	94	43.650	ENSPSIG00000004866	ATXN2L	66	62.278	Pelodiscus_sinensis
ENSNBRG00000012039	-	77	79.310	ENSPMGG00000014821	-	99	79.487	Periophthalmus_magnuspinnatus
ENSNBRG00000012039	-	57	79.266	ENSPFOG00000005935	-	56	76.256	Poecilia_formosa
ENSNBRG00000012039	-	98	78.716	ENSPLAG00000017094	-	93	82.895	Poecilia_latipinna
ENSNBRG00000012039	-	55	81.518	ENSPMEG00000017227	-	56	76.256	Poecilia_mexicana
ENSNBRG00000012039	-	57	79.450	ENSPREG00000023090	-	56	76.430	Poecilia_reticulata
ENSNBRG00000012039	-	92	41.444	ENSPVAG00000003958	ATXN2L	58	54.035	Pteropus_vampyrus
ENSNBRG00000012039	-	95	44.983	ENSPNYG00000012482	atxn2l	93	49.834	Pundamilia_nyererei
ENSNBRG00000012039	-	59	95.560	ENSPNYG00000017058	-	90	98.148	Pundamilia_nyererei
ENSNBRG00000012039	-	97	55.313	ENSSFOG00015001018	atxn2l	96	53.571	Scleropages_formosus
ENSNBRG00000012039	-	55	52.710	ENSSMAG00000016365	atxn2l	54	53.918	Scophthalmus_maximus
ENSNBRG00000012039	-	98	88.714	ENSSDUG00000023014	-	92	89.764	Seriola_dumerili
ENSNBRG00000012039	-	54	80.990	ENSSLDG00000017701	-	98	72.607	Seriola_lalandi_dorsalis
ENSNBRG00000012039	-	59	79.574	ENSTRUG00000007132	-	93	79.135	Takifugu_rubripes
ENSNBRG00000012039	-	66	63.158	ENSTTRG00000005913	ATXN2L	60	63.158	Tursiops_truncatus
ENSNBRG00000012039	-	95	39.348	ENSUMAG00000009437	ATXN2L	92	49.648	Ursus_maritimus
ENSNBRG00000012039	-	57	77.555	ENSXMAG00000010133	-	56	75.172	Xiphophorus_maculatus