EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000012048 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 1995 bases
Position: chrJH422336.1:3522490-3524484
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000015545	MMR_HSR1	PF01926.23	4.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000015968	-	555	-	ENSNBRP00000015545	184 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000012048's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000012048's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000012048	-	88	66.258	ENSNBRG00000007712	-	58	66.258
ENSNBRG00000012048	-	85	67.308	ENSNBRG00000007782	-	72	67.308
ENSNBRG00000012048	-	81	66.216	ENSNBRG00000022072	-	64	66.216
ENSNBRG00000012048	-	92	63.905	ENSNBRG00000007654	-	69	63.905
ENSNBRG00000012048	-	87	70.807	ENSNBRG00000000314	-	67	70.807
ENSNBRG00000012048	-	95	67.606	ENSNBRG00000008018	-	75	67.606
ENSNBRG00000012048	-	87	69.375	ENSNBRG00000001731	-	78	69.375
ENSNBRG00000012048	-	88	67.284	ENSNBRG00000007806	-	61	67.284
ENSNBRG00000012048	-	78	67.361	ENSNBRG00000008076	-	78	67.361
ENSNBRG00000012048	-	97	62.011	ENSNBRG00000022060	-	71	62.011

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000012048	-	94	40.556	ENSG00000124449	IRGC	65	40.556	Homo_sapiens
ENSNBRG00000012048	-	95	47.879	ENSAMEG00000004232	IRGC	51	47.879	Ailuropoda_melanoleuca
ENSNBRG00000012048	-	93	62.428	ENSACIG00000008165	-	68	62.428	Amphilophus_citrinellus
ENSNBRG00000012048	-	92	63.529	ENSACIG00000014652	-	65	64.286	Amphilophus_citrinellus
ENSNBRG00000012048	-	92	62.353	ENSACIG00000000621	-	65	62.353	Amphilophus_citrinellus
ENSNBRG00000012048	-	91	64.497	ENSACIG00000023724	-	68	64.497	Amphilophus_citrinellus
ENSNBRG00000012048	-	95	66.667	ENSACIG00000010992	-	69	67.284	Amphilophus_citrinellus
ENSNBRG00000012048	-	92	64.912	ENSAOCG00000012267	-	62	64.912	Amphiprion_ocellaris
ENSNBRG00000012048	-	88	60.494	ENSAPEG00000002648	-	91	60.494	Amphiprion_percula
ENSNBRG00000012048	-	90	60.714	ENSATEG00000011733	-	69	62.195	Anabas_testudineus
ENSNBRG00000012048	-	91	57.485	ENSATEG00000011665	-	59	59.355	Anabas_testudineus
ENSNBRG00000012048	-	88	63.415	ENSATEG00000011805	-	60	63.415	Anabas_testudineus
ENSNBRG00000012048	-	94	59.770	ENSACLG00000017575	-	61	59.770	Astatotilapia_calliptera
ENSNBRG00000012048	-	86	66.456	ENSACLG00000008069	-	68	66.456	Astatotilapia_calliptera
ENSNBRG00000012048	-	89	90.798	ENSACLG00000026694	-	66	90.062	Astatotilapia_calliptera
ENSNBRG00000012048	-	94	90.173	ENSACLG00000026716	-	58	90.173	Astatotilapia_calliptera
ENSNBRG00000012048	-	86	70.000	ENSACLG00000017807	-	88	70.000	Astatotilapia_calliptera
ENSNBRG00000012048	-	96	43.103	ENSAMXG00000001283	-	67	43.103	Astyanax_mexicanus
ENSNBRG00000012048	-	89	53.049	ENSAMXG00000043797	-	67	53.049	Astyanax_mexicanus
ENSNBRG00000012048	-	87	41.875	ENSAMXG00000038534	-	52	41.176	Astyanax_mexicanus
ENSNBRG00000012048	-	84	49.682	ENSCHOG00000005921	-	62	49.682	Choloepus_hoffmanni
ENSNBRG00000012048	-	88	51.235	ENSCPBG00000021939	-	72	52.055	Chrysemys_picta_bellii
ENSNBRG00000012048	-	95	50.562	ENSCPBG00000006680	-	92	50.562	Chrysemys_picta_bellii
ENSNBRG00000012048	-	88	33.750	ENSCPBG00000013137	-	52	33.750	Chrysemys_picta_bellii
ENSNBRG00000012048	-	95	37.500	ENSCPBG00000021470	-	56	37.500	Chrysemys_picta_bellii
ENSNBRG00000012048	-	87	56.522	ENSCVAG00000011039	-	54	56.522	Cyprinodon_variegatus
ENSNBRG00000012048	-	88	58.385	ENSCVAG00000011026	-	61	58.385	Cyprinodon_variegatus
ENSNBRG00000012048	-	92	57.647	ENSCVAG00000000472	-	65	57.647	Cyprinodon_variegatus
ENSNBRG00000012048	-	85	57.595	ENSCVAG00000018094	-	67	57.595	Cyprinodon_variegatus
ENSNBRG00000012048	-	84	57.692	ENSFHEG00000008542	-	65	57.692	Fundulus_heteroclitus
ENSNBRG00000012048	-	94	56.000	ENSGMOG00000000661	-	64	56.000	Gadus_morhua
ENSNBRG00000012048	-	93	55.491	ENSGMOG00000014685	-	56	58.750	Gadus_morhua
ENSNBRG00000012048	-	82	47.436	ENSGAGG00000002093	-	71	47.436	Gopherus_agassizii
ENSNBRG00000012048	-	96	54.802	ENSGAGG00000011615	-	79	55.056	Gopherus_agassizii
ENSNBRG00000012048	-	88	61.111	ENSHBUG00000008052	-	57	67.123	Haplochromis_burtoni
ENSNBRG00000012048	-	80	66.892	ENSHBUG00000016080	-	70	66.892	Haplochromis_burtoni
ENSNBRG00000012048	-	83	60.526	ENSHBUG00000004969	-	90	60.526	Haplochromis_burtoni
ENSNBRG00000012048	-	91	60.355	ENSHBUG00000020228	-	67	60.355	Haplochromis_burtoni
ENSNBRG00000012048	-	92	69.822	ENSHBUG00000007885	-	62	69.412	Haplochromis_burtoni
ENSNBRG00000012048	-	92	65.680	ENSHBUG00000023667	-	67	65.680	Haplochromis_burtoni
ENSNBRG00000012048	-	96	43.529	ENSIPUG00000012630	-	66	43.529	Ictalurus_punctatus
ENSNBRG00000012048	-	93	47.977	ENSJJAG00000023378	-	70	52.128	Jaculus_jaculus
ENSNBRG00000012048	-	94	60.000	ENSLBEG00000014554	-	80	60.000	Labrus_bergylta
ENSNBRG00000012048	-	96	62.570	ENSLBEG00000005157	-	65	62.570	Labrus_bergylta
ENSNBRG00000012048	-	94	62.286	ENSLBEG00000014433	-	69	62.286	Labrus_bergylta
ENSNBRG00000012048	-	95	63.068	ENSLBEG00000024117	-	69	63.429	Labrus_bergylta
ENSNBRG00000012048	-	95	61.364	ENSLBEG00000005277	-	71	61.364	Labrus_bergylta
ENSNBRG00000012048	-	85	62.025	ENSLBEG00000014225	-	88	62.025	Labrus_bergylta
ENSNBRG00000012048	-	94	52.695	ENSLACG00000016534	-	50	52.695	Latimeria_chalumnae
ENSNBRG00000012048	-	84	51.613	ENSLACG00000005910	-	50	51.613	Latimeria_chalumnae
ENSNBRG00000012048	-	82	47.333	ENSLACG00000006215	-	51	47.333	Latimeria_chalumnae
ENSNBRG00000012048	-	94	59.770	ENSMZEG00005027717	-	65	59.770	Maylandia_zebra
ENSNBRG00000012048	-	95	64.571	ENSMZEG00005013284	-	67	66.272	Maylandia_zebra
ENSNBRG00000012048	-	93	59.302	ENSMZEG00005027737	-	65	59.302	Maylandia_zebra
ENSNBRG00000012048	-	83	59.211	ENSMZEG00005027736	-	90	59.211	Maylandia_zebra
ENSNBRG00000012048	-	92	52.907	ENSMZEG00005027732	-	50	54.386	Maylandia_zebra
ENSNBRG00000012048	-	96	62.147	ENSMZEG00005027730	-	70	62.147	Maylandia_zebra
ENSNBRG00000012048	-	84	48.101	ENSMOCG00000002764	-	75	48.101	Microtus_ochrogaster
ENSNBRG00000012048	-	94	49.425	ENSMMOG00000018247	irgf3	61	49.425	Mola_mola
ENSNBRG00000012048	-	60	47.748	MGP_CAROLIEiJ_G0022304	-	68	47.748	Mus_caroli
ENSNBRG00000012048	-	86	38.994	MGP_CAROLIEiJ_G0016256	Irgm1	54	38.994	Mus_caroli
ENSNBRG00000012048	-	92	45.455	ENSMUSG00000078920	Ifi47	78	46.104	Mus_musculus
ENSNBRG00000012048	-	89	50.000	ENSMUSG00000078922	Tgtp1	68	48.889	Mus_musculus
ENSNBRG00000012048	-	91	50.299	ENSMUSG00000069892	9930111J21Rik2	58	44.444	Mus_musculus
ENSNBRG00000012048	-	91	50.898	ENSMUSG00000069893	9930111J21Rik1	58	44.444	Mus_musculus
ENSNBRG00000012048	-	92	50.581	MGP_PahariEiJ_G0017404	-	69	50.000	Mus_pahari
ENSNBRG00000012048	-	82	42.000	MGP_PahariEiJ_G0017392	Irgm1	51	42.000	Mus_pahari
ENSNBRG00000012048	-	88	43.293	MGP_SPRETEiJ_G0017099	9930111J21Rik2	71	43.077	Mus_spretus
ENSNBRG00000012048	-	86	40.881	MGP_SPRETEiJ_G0017097	Irgm1	54	40.881	Mus_spretus
ENSNBRG00000012048	-	93	43.503	ENSMLUG00000009743	-	50	43.503	Myotis_lucifugus
ENSNBRG00000012048	-	97	40.541	ENSOPRG00000004262	IRGC	61	40.541	Ochotona_princeps
ENSNBRG00000012048	-	90	50.299	ENSOANG00000001820	-	56	50.299	Ornithorhynchus_anatinus
ENSNBRG00000012048	-	92	42.604	ENSPKIG00000001724	IRGC	60	44.667	Paramormyrops_kingsleyae
ENSNBRG00000012048	-	93	47.191	ENSPSIG00000008699	-	62	47.191	Pelodiscus_sinensis
ENSNBRG00000012048	-	95	60.795	ENSPMGG00000022164	-	71	60.795	Periophthalmus_magnuspinnatus
ENSNBRG00000012048	-	92	55.294	ENSPMGG00000023020	-	68	55.294	Periophthalmus_magnuspinnatus
ENSNBRG00000012048	-	92	56.471	ENSPMGG00000023541	-	66	58.385	Periophthalmus_magnuspinnatus
ENSNBRG00000012048	-	92	50.292	ENSPEMG00000015679	-	54	44.118	Peromyscus_maniculatus_bairdii
ENSNBRG00000012048	-	93	55.422	ENSPLAG00000023485	-	53	55.422	Poecilia_latipinna
ENSNBRG00000012048	-	92	61.176	ENSPLAG00000016196	-	65	62.112	Poecilia_latipinna
ENSNBRG00000012048	-	92	59.412	ENSPMEG00000011302	-	69	59.412	Poecilia_mexicana
ENSNBRG00000012048	-	83	55.844	ENSPREG00000004310	-	71	56.250	Poecilia_reticulata
ENSNBRG00000012048	-	92	63.529	ENSPNYG00000023912	-	66	63.529	Pundamilia_nyererei
ENSNBRG00000012048	-	95	59.091	ENSPNYG00000004835	-	67	59.884	Pundamilia_nyererei
ENSNBRG00000012048	-	93	61.628	ENSPNYG00000007188	-	68	63.473	Pundamilia_nyererei
ENSNBRG00000012048	-	99	66.447	ENSPNYG00000023728	-	74	66.447	Pundamilia_nyererei
ENSNBRG00000012048	-	90	62.275	ENSPNYG00000021714	-	61	62.275	Pundamilia_nyererei
ENSNBRG00000012048	-	89	67.485	ENSPNYG00000021508	-	60	67.485	Pundamilia_nyererei
ENSNBRG00000012048	-	86	70.625	ENSPNYG00000023680	-	85	70.625	Pundamilia_nyererei
ENSNBRG00000012048	-	85	57.325	ENSPNYG00000023816	-	90	56.024	Pundamilia_nyererei
ENSNBRG00000012048	-	97	47.561	ENSPNAG00000023934	-	67	47.561	Pygocentrus_nattereri
ENSNBRG00000012048	-	94	47.953	ENSPNAG00000000207	-	67	59.322	Pygocentrus_nattereri
ENSNBRG00000012048	-	90	49.697	ENSPNAG00000029024	-	65	46.429	Pygocentrus_nattereri
ENSNBRG00000012048	-	61	66.964	ENSSLDG00000006807	-	80	66.964	Seriola_lalandi_dorsalis
ENSNBRG00000012048	-	66	70.248	ENSSLDG00000014712	-	51	70.248	Seriola_lalandi_dorsalis
ENSNBRG00000012048	-	91	34.731	ENSSPUG00000015934	-	52	35.443	Sphenodon_punctatus
ENSNBRG00000012048	-	89	52.121	ENSSPUG00000015920	-	50	52.121	Sphenodon_punctatus
ENSNBRG00000012048	-	89	62.424	ENSSPAG00000007371	-	83	62.424	Stegastes_partitus
ENSNBRG00000012048	-	92	61.765	ENSSPAG00000006926	-	66	61.765	Stegastes_partitus
ENSNBRG00000012048	-	92	62.941	ENSSPAG00000001416	-	71	62.941	Stegastes_partitus
ENSNBRG00000012048	-	92	59.302	ENSTRUG00000001895	-	81	59.302	Takifugu_rubripes
ENSNBRG00000012048	-	94	60.000	ENSTRUG00000005821	-	68	60.000	Takifugu_rubripes
ENSNBRG00000012048	-	92	62.573	ENSTNIG00000000695	-	97	62.573	Tetraodon_nigroviridis
ENSNBRG00000012048	-	95	61.364	ENSTNIG00000000142	-	51	61.364	Tetraodon_nigroviridis
ENSNBRG00000012048	-	94	53.672	ENSTNIG00000000212	-	50	53.672	Tetraodon_nigroviridis