EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000012119 (Gene tree)
Gene ID: -
Gene Symbol: snrpd1
Alias: CHUNP6882|fk26a01|wu:fk26a01|zgc:86929
Full Name: small nuclear ribonucleoprotein Sm D1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 2899 bases
Position: chrJH422285.1:5075937-5078835
Accession: 102792749
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000015640	LSM	PF01423.22	5.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000016065	-	503	XM_006787812	ENSNBRP00000015640	121 (aa)	XP_006787875	-

Gene Model

Click here to download ENSNBRG00000012119's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000012119's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000012119	snrpd1	61	35.135	ENSNBRG00000014306	oscp1a	60	35.135

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000012119	snrpd1	78	95.745	ENSG00000167088	SNRPD1	79	95.745	Homo_sapiens
ENSNBRG00000012119	snrpd1	78	100.000	ENSAPOG00000019446	snrpd1	51	100.000	Acanthochromis_polyacanthus
ENSNBRG00000012119	snrpd1	74	95.556	ENSAMEG00000002576	SNRPD1	77	95.556	Ailuropoda_melanoleuca
ENSNBRG00000012119	snrpd1	72	100.000	ENSACIG00000011263	snrpd1	78	100.000	Amphilophus_citrinellus
ENSNBRG00000012119	snrpd1	78	100.000	ENSAOCG00000007406	snrpd1	79	100.000	Amphiprion_ocellaris
ENSNBRG00000012119	snrpd1	72	100.000	ENSAPEG00000012539	SNRPD1	78	100.000	Amphiprion_percula
ENSNBRG00000012119	snrpd1	78	94.681	ENSAPEG00000014961	snrpd1	78	94.681	Amphiprion_percula
ENSNBRG00000012119	snrpd1	78	100.000	ENSATEG00000014399	snrpd1	79	100.000	Anabas_testudineus
ENSNBRG00000012119	snrpd1	74	95.556	ENSAPLG00000012256	SNRPD1	76	95.556	Anas_platyrhynchos
ENSNBRG00000012119	snrpd1	78	95.745	ENSACAG00000006364	SNRPD1	79	95.745	Anolis_carolinensis
ENSNBRG00000012119	snrpd1	78	95.745	ENSANAG00000025641	SNRPD1	79	95.745	Aotus_nancymaae
ENSNBRG00000012119	snrpd1	72	100.000	ENSACLG00000017406	snrpd1	78	100.000	Astatotilapia_calliptera
ENSNBRG00000012119	snrpd1	78	98.936	ENSAMXG00000004589	snrpd1	79	98.936	Astyanax_mexicanus
ENSNBRG00000012119	snrpd1	78	93.617	ENSBTAG00000012376	-	70	93.617	Bos_taurus
ENSNBRG00000012119	snrpd1	76	91.304	ENSBTAG00000055316	-	79	91.304	Bos_taurus
ENSNBRG00000012119	snrpd1	78	95.745	ENSBTAG00000008292	SNRPD1	79	95.745	Bos_taurus
ENSNBRG00000012119	snrpd1	78	91.489	ENSBTAG00000047266	-	79	91.489	Bos_taurus
ENSNBRG00000012119	snrpd1	73	78.409	WBGene00004916	snr-3	75	74.737	Caenorhabditis_elegans
ENSNBRG00000012119	snrpd1	78	95.745	ENSCJAG00000042955	SNRPD1	79	95.745	Callithrix_jacchus
ENSNBRG00000012119	snrpd1	78	95.745	ENSCAFG00000018247	SNRPD1	79	95.745	Canis_familiaris
ENSNBRG00000012119	snrpd1	78	95.745	ENSCAFG00020015914	SNRPD1	73	95.745	Canis_lupus_dingo
ENSNBRG00000012119	snrpd1	76	94.565	ENSCHIG00000005557	SNRPD1	77	94.565	Capra_hircus
ENSNBRG00000012119	snrpd1	78	95.745	ENSTSYG00000030028	SNRPD1	79	95.745	Carlito_syrichta
ENSNBRG00000012119	snrpd1	74	94.444	ENSCAPG00000008103	SNRPD1	78	94.444	Cavia_aperea
ENSNBRG00000012119	snrpd1	78	95.745	ENSCPOG00000004679	SNRPD1	79	95.745	Cavia_porcellus
ENSNBRG00000012119	snrpd1	78	92.553	ENSCCAG00000016652	-	79	92.553	Cebus_capucinus
ENSNBRG00000012119	snrpd1	78	91.489	ENSCCAG00000005390	-	79	91.489	Cebus_capucinus
ENSNBRG00000012119	snrpd1	78	94.681	ENSCCAG00000020611	-	79	94.681	Cebus_capucinus
ENSNBRG00000012119	snrpd1	78	95.745	ENSCCAG00000032658	SNRPD1	79	95.745	Cebus_capucinus
ENSNBRG00000012119	snrpd1	78	95.745	ENSCATG00000039978	SNRPD1	79	95.745	Cercocebus_atys
ENSNBRG00000012119	snrpd1	78	95.745	ENSCLAG00000008691	SNRPD1	79	95.745	Chinchilla_lanigera
ENSNBRG00000012119	snrpd1	78	95.745	ENSCSAG00000017654	SNRPD1	79	95.745	Chlorocebus_sabaeus
ENSNBRG00000012119	snrpd1	79	95.789	ENSCPBG00000023143	SNRPD1	81	95.789	Chrysemys_picta_bellii
ENSNBRG00000012119	snrpd1	71	84.884	ENSCING00000024100	-	69	84.884	Ciona_intestinalis
ENSNBRG00000012119	snrpd1	72	83.908	ENSCSAVG00000004578	-	70	83.908	Ciona_savignyi
ENSNBRG00000012119	snrpd1	78	95.745	ENSCGRG00001021055	-	79	95.745	Cricetulus_griseus_chok1gshd
ENSNBRG00000012119	snrpd1	77	72.043	ENSCGRG00001009945	-	82	72.043	Cricetulus_griseus_chok1gshd
ENSNBRG00000012119	snrpd1	78	95.745	ENSCGRG00000000490	-	79	95.745	Cricetulus_griseus_crigri
ENSNBRG00000012119	snrpd1	77	72.043	ENSCGRG00000006224	-	82	72.043	Cricetulus_griseus_crigri
ENSNBRG00000012119	snrpd1	86	92.381	ENSCSEG00000018141	snrpd1	79	98.936	Cynoglossus_semilaevis
ENSNBRG00000012119	snrpd1	78	100.000	ENSCVAG00000000534	snrpd1	79	100.000	Cyprinodon_variegatus
ENSNBRG00000012119	snrpd1	78	98.936	ENSDARG00000011648	snrpd1	96	97.802	Danio_rerio
ENSNBRG00000012119	snrpd1	78	95.745	ENSDNOG00000040310	SNRPD1	79	95.745	Dasypus_novemcinctus
ENSNBRG00000012119	snrpd1	78	95.745	ENSDORG00000008349	Snrpd1	79	95.745	Dipodomys_ordii
ENSNBRG00000012119	snrpd1	78	80.851	FBgn0261933	SmD1	77	80.208	Drosophila_melanogaster
ENSNBRG00000012119	snrpd1	52	93.651	ENSETEG00000011689	SNRPD1	53	93.651	Echinops_telfairi
ENSNBRG00000012119	snrpd1	79	90.625	ENSEBUG00000003170	snrpd1	95	90.625	Eptatretus_burgeri
ENSNBRG00000012119	snrpd1	72	95.402	ENSEASG00005002433	SNRPD1	78	95.402	Equus_asinus_asinus
ENSNBRG00000012119	snrpd1	72	95.402	ENSECAG00000014373	SNRPD1	78	95.402	Equus_caballus
ENSNBRG00000012119	snrpd1	74	95.506	ENSEEUG00000004987	SNRPD1	100	95.506	Erinaceus_europaeus
ENSNBRG00000012119	snrpd1	78	97.872	ENSELUG00000000088	snrpd1	79	97.872	Esox_lucius
ENSNBRG00000012119	snrpd1	78	95.745	ENSFCAG00000012352	SNRPD1	79	95.745	Felis_catus
ENSNBRG00000012119	snrpd1	72	95.402	ENSFALG00000002646	SNRPD1	78	95.402	Ficedula_albicollis
ENSNBRG00000012119	snrpd1	78	98.936	ENSGMOG00000015607	snrpd1	79	98.936	Gadus_morhua
ENSNBRG00000012119	snrpd1	78	95.745	ENSGALG00000041334	SNRPD1	79	95.745	Gallus_gallus
ENSNBRG00000012119	snrpd1	78	100.000	ENSGAFG00000011171	snrpd1	79	100.000	Gambusia_affinis
ENSNBRG00000012119	snrpd1	78	98.936	ENSGACG00000005201	SNRPD1	79	98.936	Gasterosteus_aculeatus
ENSNBRG00000012119	snrpd1	78	95.745	ENSGAGG00000011197	SNRPD1	79	95.745	Gopherus_agassizii
ENSNBRG00000012119	snrpd1	78	90.426	ENSGGOG00000026706	-	78	90.426	Gorilla_gorilla
ENSNBRG00000012119	snrpd1	78	95.745	ENSGGOG00000041053	SNRPD1	79	95.745	Gorilla_gorilla
ENSNBRG00000012119	snrpd1	95	98.261	ENSHBUG00000003236	snrpd1	79	100.000	Haplochromis_burtoni
ENSNBRG00000012119	snrpd1	78	95.745	ENSHGLG00000007152	SNRPD1	79	95.745	Heterocephalus_glaber_female
ENSNBRG00000012119	snrpd1	78	95.745	ENSHGLG00100008618	SNRPD1	79	95.745	Heterocephalus_glaber_male
ENSNBRG00000012119	snrpd1	78	100.000	ENSIPUG00000003576	snrpd1	79	100.000	Ictalurus_punctatus
ENSNBRG00000012119	snrpd1	78	95.745	ENSSTOG00000000485	SNRPD1	79	95.745	Ictidomys_tridecemlineatus
ENSNBRG00000012119	snrpd1	78	95.745	ENSJJAG00000017698	Snrpd1	79	95.745	Jaculus_jaculus
ENSNBRG00000012119	snrpd1	78	100.000	ENSKMAG00000005987	snrpd1	79	100.000	Kryptolebias_marmoratus
ENSNBRG00000012119	snrpd1	78	100.000	ENSLBEG00000003327	snrpd1	79	100.000	Labrus_bergylta
ENSNBRG00000012119	snrpd1	78	95.745	ENSLACG00000001955	SNRPD1	79	95.745	Latimeria_chalumnae
ENSNBRG00000012119	snrpd1	76	94.565	ENSLOCG00000002003	snrpd1	79	94.565	Lepisosteus_oculatus
ENSNBRG00000012119	snrpd1	77	93.548	ENSLAFG00000005819	SNRPD1	79	93.548	Loxodonta_africana
ENSNBRG00000012119	snrpd1	78	95.745	ENSMFAG00000042080	SNRPD1	79	95.745	Macaca_fascicularis
ENSNBRG00000012119	snrpd1	74	95.506	ENSMMUG00000003992	SNRPD1	76	95.506	Macaca_mulatta
ENSNBRG00000012119	snrpd1	78	95.745	ENSMNEG00000041296	SNRPD1	79	95.745	Macaca_nemestrina
ENSNBRG00000012119	snrpd1	78	95.745	ENSMLEG00000028659	SNRPD1	79	95.745	Mandrillus_leucophaeus
ENSNBRG00000012119	snrpd1	78	100.000	ENSMAMG00000012971	snrpd1	79	100.000	Mastacembelus_armatus
ENSNBRG00000012119	snrpd1	78	100.000	ENSMZEG00005004685	snrpd1	79	100.000	Maylandia_zebra
ENSNBRG00000012119	snrpd1	74	95.556	ENSMGAG00000011598	SNRPD1	74	95.556	Meleagris_gallopavo
ENSNBRG00000012119	snrpd1	76	94.565	ENSMAUG00000006829	-	60	94.565	Mesocricetus_auratus
ENSNBRG00000012119	snrpd1	78	79.787	ENSMAUG00000016502	-	85	79.787	Mesocricetus_auratus
ENSNBRG00000012119	snrpd1	78	79.787	ENSMAUG00000016467	-	85	79.787	Mesocricetus_auratus
ENSNBRG00000012119	snrpd1	78	95.745	ENSMICG00000044066	SNRPD1	79	95.745	Microcebus_murinus
ENSNBRG00000012119	snrpd1	78	95.745	ENSMOCG00000017367	Snrpd1	79	95.745	Microtus_ochrogaster
ENSNBRG00000012119	snrpd1	78	100.000	ENSMMOG00000019089	snrpd1	79	100.000	Mola_mola
ENSNBRG00000012119	snrpd1	78	95.745	ENSMODG00000021487	SNRPD1	79	95.745	Monodelphis_domestica
ENSNBRG00000012119	snrpd1	78	100.000	ENSMALG00000014459	snrpd1	79	100.000	Monopterus_albus
ENSNBRG00000012119	snrpd1	78	95.745	MGP_CAROLIEiJ_G0021994	Snrpd1	79	95.745	Mus_caroli
ENSNBRG00000012119	snrpd1	78	95.745	ENSMUSG00000002477	Snrpd1	79	95.745	Mus_musculus
ENSNBRG00000012119	snrpd1	78	95.745	MGP_PahariEiJ_G0018731	Snrpd1	79	95.745	Mus_pahari
ENSNBRG00000012119	snrpd1	78	95.745	MGP_SPRETEiJ_G0022910	Snrpd1	79	95.745	Mus_spretus
ENSNBRG00000012119	snrpd1	74	95.556	ENSMPUG00000005567	-	77	95.556	Mustela_putorius_furo
ENSNBRG00000012119	snrpd1	78	94.681	ENSMPUG00000020041	-	79	94.681	Mustela_putorius_furo
ENSNBRG00000012119	snrpd1	76	94.565	ENSMLUG00000009124	SNRPD1	71	94.565	Myotis_lucifugus
ENSNBRG00000012119	snrpd1	78	95.745	ENSNGAG00000023946	Snrpd1	79	95.745	Nannospalax_galili
ENSNBRG00000012119	snrpd1	78	92.553	ENSNLEG00000031430	SNRPD1	78	92.553	Nomascus_leucogenys
ENSNBRG00000012119	snrpd1	78	95.745	ENSODEG00000005764	SNRPD1	79	95.745	Octodon_degus
ENSNBRG00000012119	snrpd1	78	100.000	ENSONIG00000002486	snrpd1	79	100.000	Oreochromis_niloticus
ENSNBRG00000012119	snrpd1	74	87.778	ENSOANG00000004638	-	76	87.912	Ornithorhynchus_anatinus
ENSNBRG00000012119	snrpd1	74	95.556	ENSOCUG00000023761	-	77	95.556	Oryctolagus_cuniculus
ENSNBRG00000012119	snrpd1	78	94.681	ENSOCUG00000014399	-	79	94.681	Oryctolagus_cuniculus
ENSNBRG00000012119	snrpd1	72	100.000	ENSORLG00000012516	snrpd1	78	100.000	Oryzias_latipes
ENSNBRG00000012119	snrpd1	78	100.000	ENSORLG00020005743	snrpd1	79	100.000	Oryzias_latipes_hni
ENSNBRG00000012119	snrpd1	78	100.000	ENSORLG00015013402	snrpd1	79	100.000	Oryzias_latipes_hsok
ENSNBRG00000012119	snrpd1	78	100.000	ENSOMEG00000011571	snrpd1	79	100.000	Oryzias_melastigma
ENSNBRG00000012119	snrpd1	75	94.505	ENSOGAG00000007833	SNRPD1	77	93.478	Otolemur_garnettii
ENSNBRG00000012119	snrpd1	78	95.745	ENSOARG00000003413	-	71	95.745	Ovis_aries
ENSNBRG00000012119	snrpd1	78	95.745	ENSPPAG00000042593	SNRPD1	79	95.745	Pan_paniscus
ENSNBRG00000012119	snrpd1	78	65.957	ENSPPRG00000005009	-	73	65.957	Panthera_pardus
ENSNBRG00000012119	snrpd1	78	95.745	ENSPPRG00000002399	SNRPD1	79	95.745	Panthera_pardus
ENSNBRG00000012119	snrpd1	74	95.506	ENSPTIG00000013206	SNRPD1	78	95.506	Panthera_tigris_altaica
ENSNBRG00000012119	snrpd1	78	89.362	ENSPTRG00000050159	-	80	89.362	Pan_troglodytes
ENSNBRG00000012119	snrpd1	78	95.745	ENSPTRG00000009909	SNRPD1	79	95.745	Pan_troglodytes
ENSNBRG00000012119	snrpd1	78	95.745	ENSPANG00000023478	SNRPD1	79	95.745	Papio_anubis
ENSNBRG00000012119	snrpd1	78	97.872	ENSPKIG00000003985	SNRPD1	79	97.872	Paramormyrops_kingsleyae
ENSNBRG00000012119	snrpd1	72	100.000	ENSPKIG00000021610	snrpd1	78	100.000	Paramormyrops_kingsleyae
ENSNBRG00000012119	snrpd1	78	100.000	ENSPMGG00000001862	snrpd1	79	100.000	Periophthalmus_magnuspinnatus
ENSNBRG00000012119	snrpd1	78	95.745	ENSPEMG00000014773	-	79	95.745	Peromyscus_maniculatus_bairdii
ENSNBRG00000012119	snrpd1	79	82.474	ENSPMAG00000003938	-	79	83.333	Petromyzon_marinus
ENSNBRG00000012119	snrpd1	78	95.745	ENSPCIG00000020320	SNRPD1	79	95.745	Phascolarctos_cinereus
ENSNBRG00000012119	snrpd1	78	100.000	ENSPFOG00000012448	SNRPD1	83	100.000	Poecilia_formosa
ENSNBRG00000012119	snrpd1	78	100.000	ENSPLAG00000006738	snrpd1	83	100.000	Poecilia_latipinna
ENSNBRG00000012119	snrpd1	78	100.000	ENSPMEG00000021942	snrpd1	83	100.000	Poecilia_mexicana
ENSNBRG00000012119	snrpd1	78	100.000	ENSPREG00000007094	snrpd1	79	100.000	Poecilia_reticulata
ENSNBRG00000012119	snrpd1	78	95.745	ENSPPYG00000025874	SNRPD1	79	95.745	Pongo_abelii
ENSNBRG00000012119	snrpd1	78	95.745	ENSPCOG00000013327	SNRPD1	79	95.745	Propithecus_coquereli
ENSNBRG00000012119	snrpd1	78	95.745	ENSPVAG00000005511	SNRPD1	63	95.745	Pteropus_vampyrus
ENSNBRG00000012119	snrpd1	95	98.261	ENSPNYG00000010941	snrpd1	57	98.261	Pundamilia_nyererei
ENSNBRG00000012119	snrpd1	78	97.872	ENSPNAG00000017824	snrpd1	79	97.872	Pygocentrus_nattereri
ENSNBRG00000012119	snrpd1	78	95.745	ENSRNOG00000013714	Snrpd1	79	95.745	Rattus_norvegicus
ENSNBRG00000012119	snrpd1	78	95.745	ENSRBIG00000022996	SNRPD1	79	95.745	Rhinopithecus_bieti
ENSNBRG00000012119	snrpd1	78	95.745	ENSRROG00000027640	SNRPD1	79	95.745	Rhinopithecus_roxellana
ENSNBRG00000012119	snrpd1	78	95.745	ENSSBOG00000020998	SNRPD1	79	95.745	Saimiri_boliviensis_boliviensis
ENSNBRG00000012119	snrpd1	78	95.745	ENSSHAG00000011791	SNRPD1	79	95.745	Sarcophilus_harrisii
ENSNBRG00000012119	snrpd1	92	90.179	ENSSFOG00015022253	-	79	98.936	Scleropages_formosus
ENSNBRG00000012119	snrpd1	78	98.936	ENSSFOG00015008809	-	79	98.936	Scleropages_formosus
ENSNBRG00000012119	snrpd1	78	98.936	ENSSMAG00000008765	snrpd1	79	98.936	Scophthalmus_maximus
ENSNBRG00000012119	snrpd1	75	97.802	ENSSDUG00000010521	snrpd1	77	97.802	Seriola_dumerili
ENSNBRG00000012119	snrpd1	78	100.000	ENSSLDG00000011858	snrpd1	79	100.000	Seriola_lalandi_dorsalis
ENSNBRG00000012119	snrpd1	55	97.015	ENSSARG00000004271	SNRPD1	100	97.015	Sorex_araneus
ENSNBRG00000012119	snrpd1	78	95.745	ENSSPUG00000002824	SNRPD1	79	95.745	Sphenodon_punctatus
ENSNBRG00000012119	snrpd1	72	100.000	ENSSPAG00000015229	snrpd1	78	100.000	Stegastes_partitus
ENSNBRG00000012119	snrpd1	78	95.745	ENSSSCG00000003701	SNRPD1	79	95.745	Sus_scrofa
ENSNBRG00000012119	snrpd1	74	95.556	ENSTGUG00000005095	SNRPD1	76	95.556	Taeniopygia_guttata
ENSNBRG00000012119	snrpd1	72	97.701	ENSTRUG00000008977	snrpd1	78	97.701	Takifugu_rubripes
ENSNBRG00000012119	snrpd1	64	94.872	ENSTNIG00000001224	snrpd1	75	94.872	Tetraodon_nigroviridis
ENSNBRG00000012119	snrpd1	52	93.651	ENSTBEG00000013776	SNRPD1	72	93.651	Tupaia_belangeri
ENSNBRG00000012119	snrpd1	74	95.556	ENSTTRG00000002654	SNRPD1	78	95.556	Tursiops_truncatus
ENSNBRG00000012119	snrpd1	79	94.792	ENSUAMG00000013431	SNRPD1	96	94.792	Ursus_americanus
ENSNBRG00000012119	snrpd1	78	95.745	ENSUMAG00000019740	SNRPD1	79	95.745	Ursus_maritimus
ENSNBRG00000012119	snrpd1	78	95.745	ENSVPAG00000010056	SNRPD1	63	95.745	Vicugna_pacos
ENSNBRG00000012119	snrpd1	72	95.402	ENSVVUG00000004009	SNRPD1	78	95.402	Vulpes_vulpes
ENSNBRG00000012119	snrpd1	78	93.617	ENSXETG00000027354	snrpd1	79	93.617	Xenopus_tropicalis
ENSNBRG00000012119	snrpd1	78	100.000	ENSXCOG00000020108	snrpd1	79	100.000	Xiphophorus_couchianus
ENSNBRG00000012119	snrpd1	78	100.000	ENSXMAG00000003368	snrpd1	79	100.000	Xiphophorus_maculatus