EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000012196 (Gene tree)
Gene ID: 102782493
Gene Symbol: rnpc3
Alias: caliban|clbn|zgc:136847
Full Name: RNA-binding protein 40-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 19731 bases
Position: chrJH422431.1:943979-963709
Accession: 102782493
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000015788	RRM_1	PF00076.22	3.2e-15	1	2
ENSNBRP00000015788	RRM_1	PF00076.22	3.2e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000016214	-	1545	XM_006806333	ENSNBRP00000015788	514 (aa)	XP_006806396	-

Gene Model

Click here to download ENSNBRG00000012196's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000012196's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000012196	rnpc3	93	54.251	ENSG00000185946	RNPC3	96	57.895	Homo_sapiens
ENSNBRG00000012196	rnpc3	96	86.228	ENSAPOG00000017371	rnpc3	99	86.228	Acanthochromis_polyacanthus
ENSNBRG00000012196	rnpc3	93	54.858	ENSAMEG00000001694	RNPC3	94	54.858	Ailuropoda_melanoleuca
ENSNBRG00000012196	rnpc3	96	85.127	ENSACIG00000021043	rnpc3	100	85.127	Amphilophus_citrinellus
ENSNBRG00000012196	rnpc3	96	85.039	ENSAOCG00000014052	rnpc3	98	85.039	Amphiprion_ocellaris
ENSNBRG00000012196	rnpc3	96	84.843	ENSAPEG00000008739	rnpc3	98	84.843	Amphiprion_percula
ENSNBRG00000012196	rnpc3	96	80.507	ENSATEG00000021263	rnpc3	99	80.507	Anabas_testudineus
ENSNBRG00000012196	rnpc3	86	56.347	ENSAPLG00000015605	RNPC3	99	56.347	Anas_platyrhynchos
ENSNBRG00000012196	rnpc3	92	55.136	ENSACAG00000002029	RNPC3	96	53.279	Anolis_carolinensis
ENSNBRG00000012196	rnpc3	93	54.343	ENSANAG00000019950	RNPC3	95	54.343	Aotus_nancymaae
ENSNBRG00000012196	rnpc3	97	99.398	ENSACLG00000014702	rnpc3	100	99.398	Astatotilapia_calliptera
ENSNBRG00000012196	rnpc3	97	65.362	ENSAMXG00000033372	rnpc3	99	65.558	Astyanax_mexicanus
ENSNBRG00000012196	rnpc3	93	54.767	ENSBTAG00000019091	RNPC3	95	54.767	Bos_taurus
ENSNBRG00000012196	rnpc3	93	54.379	ENSCJAG00000035686	RNPC3	94	54.453	Callithrix_jacchus
ENSNBRG00000012196	rnpc3	93	54.564	ENSCAFG00000019972	RNPC3	94	54.564	Canis_familiaris
ENSNBRG00000012196	rnpc3	93	54.564	ENSCAFG00020011300	RNPC3	94	54.564	Canis_lupus_dingo
ENSNBRG00000012196	rnpc3	93	55.152	ENSCHIG00000020361	RNPC3	95	54.656	Capra_hircus
ENSNBRG00000012196	rnpc3	93	54.049	ENSTSYG00000030256	RNPC3	95	54.049	Carlito_syrichta
ENSNBRG00000012196	rnpc3	83	44.270	ENSCAPG00000013600	RNPC3	97	44.444	Cavia_aperea
ENSNBRG00000012196	rnpc3	93	53.036	ENSCPOG00000031638	RNPC3	95	52.705	Cavia_porcellus
ENSNBRG00000012196	rnpc3	93	54.141	ENSCCAG00000024301	RNPC3	95	54.141	Cebus_capucinus
ENSNBRG00000012196	rnpc3	93	54.141	ENSCATG00000002086	RNPC3	94	54.141	Cercocebus_atys
ENSNBRG00000012196	rnpc3	93	41.736	ENSCATG00000035930	-	52	48.750	Cercocebus_atys
ENSNBRG00000012196	rnpc3	93	51.277	ENSCLAG00000005169	RNPC3	95	52.227	Chinchilla_lanigera
ENSNBRG00000012196	rnpc3	93	54.545	ENSCSAG00000001519	RNPC3	94	54.343	Chlorocebus_sabaeus
ENSNBRG00000012196	rnpc3	93	56.939	ENSCPBG00000028311	RNPC3	95	57.143	Chrysemys_picta_bellii
ENSNBRG00000012196	rnpc3	92	38.730	ENSCING00000021276	-	99	38.730	Ciona_intestinalis
ENSNBRG00000012196	rnpc3	91	38.155	ENSCSAVG00000002800	-	76	56.154	Ciona_savignyi
ENSNBRG00000012196	rnpc3	93	53.737	ENSCANG00000031444	RNPC3	94	54.032	Colobus_angolensis_palliatus
ENSNBRG00000012196	rnpc3	94	53.737	ENSCGRG00001019276	Rnpc3	95	53.939	Cricetulus_griseus_chok1gshd
ENSNBRG00000012196	rnpc3	86	51.868	ENSCGRG00000000053	Rnpc3	99	52.088	Cricetulus_griseus_crigri
ENSNBRG00000012196	rnpc3	96	76.876	ENSCSEG00000013475	rnpc3	99	76.876	Cynoglossus_semilaevis
ENSNBRG00000012196	rnpc3	96	79.256	ENSCVAG00000002645	rnpc3	99	79.256	Cyprinodon_variegatus
ENSNBRG00000012196	rnpc3	97	63.938	ENSDARG00000011247	rnpc3	99	64.706	Danio_rerio
ENSNBRG00000012196	rnpc3	93	54.361	ENSDNOG00000044555	-	95	54.361	Dasypus_novemcinctus
ENSNBRG00000012196	rnpc3	93	54.767	ENSDNOG00000047498	-	95	54.767	Dasypus_novemcinctus
ENSNBRG00000012196	rnpc3	93	53.659	ENSDORG00000027343	Rnpc3	95	53.659	Dipodomys_ordii
ENSNBRG00000012196	rnpc3	96	49.618	ENSEBUG00000002068	rnpc3	98	50.586	Eptatretus_burgeri
ENSNBRG00000012196	rnpc3	93	54.767	ENSEASG00005015957	RNPC3	94	54.767	Equus_asinus_asinus
ENSNBRG00000012196	rnpc3	93	54.656	ENSECAG00000021148	RNPC3	94	54.656	Equus_caballus
ENSNBRG00000012196	rnpc3	96	68.199	ENSELUG00000002264	rnpc3	99	66.795	Esox_lucius
ENSNBRG00000012196	rnpc3	93	54.564	ENSFCAG00000024312	RNPC3	94	54.564	Felis_catus
ENSNBRG00000012196	rnpc3	86	56.473	ENSFALG00000002580	RNPC3	99	55.902	Ficedula_albicollis
ENSNBRG00000012196	rnpc3	93	53.846	ENSFDAG00000019948	RNPC3	95	53.846	Fukomys_damarensis
ENSNBRG00000012196	rnpc3	96	75.556	ENSFHEG00000020647	rnpc3	99	75.556	Fundulus_heteroclitus
ENSNBRG00000012196	rnpc3	97	69.307	ENSGMOG00000019213	rnpc3	99	68.849	Gadus_morhua
ENSNBRG00000012196	rnpc3	93	56.352	ENSGALG00000005162	RNPC3	88	56.468	Gallus_gallus
ENSNBRG00000012196	rnpc3	96	77.712	ENSGAFG00000017236	rnpc3	99	77.712	Gambusia_affinis
ENSNBRG00000012196	rnpc3	97	80.588	ENSGACG00000002048	rnpc3	99	80.273	Gasterosteus_aculeatus
ENSNBRG00000012196	rnpc3	93	57.551	ENSGAGG00000008438	RNPC3	94	57.551	Gopherus_agassizii
ENSNBRG00000012196	rnpc3	94	47.835	ENSGGOG00000026201	-	95	47.835	Gorilla_gorilla
ENSNBRG00000012196	rnpc3	79	100.000	ENSHBUG00000015966	rnpc3	85	100.000	Haplochromis_burtoni
ENSNBRG00000012196	rnpc3	93	53.106	ENSHGLG00000001708	RNPC3	95	53.106	Heterocephalus_glaber_female
ENSNBRG00000012196	rnpc3	93	53.106	ENSHGLG00100003005	RNPC3	95	53.106	Heterocephalus_glaber_male
ENSNBRG00000012196	rnpc3	96	75.149	ENSHCOG00000017135	rnpc3	99	75.149	Hippocampus_comes
ENSNBRG00000012196	rnpc3	96	63.492	ENSIPUG00000002916	rnpc3	99	63.796	Ictalurus_punctatus
ENSNBRG00000012196	rnpc3	93	53.846	ENSSTOG00000025020	RNPC3	95	53.846	Ictidomys_tridecemlineatus
ENSNBRG00000012196	rnpc3	93	52.857	ENSJJAG00000010203	Rnpc3	95	52.857	Jaculus_jaculus
ENSNBRG00000012196	rnpc3	96	80.439	ENSKMAG00000017358	rnpc3	100	80.040	Kryptolebias_marmoratus
ENSNBRG00000012196	rnpc3	96	82.376	ENSLBEG00000024901	rnpc3	97	82.376	Labrus_bergylta
ENSNBRG00000012196	rnpc3	96	58.135	ENSLACG00000005720	RNPC3	92	55.952	Latimeria_chalumnae
ENSNBRG00000012196	rnpc3	96	64.625	ENSLOCG00000007986	rnpc3	99	61.660	Lepisosteus_oculatus
ENSNBRG00000012196	rnpc3	93	54.472	ENSLAFG00000032342	RNPC3	95	54.545	Loxodonta_africana
ENSNBRG00000012196	rnpc3	93	41.788	ENSMFAG00000002917	-	98	42.634	Macaca_fascicularis
ENSNBRG00000012196	rnpc3	93	54.141	ENSMFAG00000002004	RNPC3	94	54.141	Macaca_fascicularis
ENSNBRG00000012196	rnpc3	93	53.939	ENSMMUG00000018039	RNPC3	94	53.939	Macaca_mulatta
ENSNBRG00000012196	rnpc3	75	52.683	ENSMMUG00000002098	-	85	52.174	Macaca_mulatta
ENSNBRG00000012196	rnpc3	93	50.909	ENSMNEG00000033950	RNPC3	94	50.909	Macaca_nemestrina
ENSNBRG00000012196	rnpc3	93	40.625	ENSMNEG00000029209	-	99	41.814	Macaca_nemestrina
ENSNBRG00000012196	rnpc3	93	41.260	ENSMLEG00000034644	-	95	41.129	Mandrillus_leucophaeus
ENSNBRG00000012196	rnpc3	93	54.141	ENSMLEG00000033628	RNPC3	94	54.141	Mandrillus_leucophaeus
ENSNBRG00000012196	rnpc3	96	73.031	ENSMAMG00000007496	rnpc3	99	73.031	Mastacembelus_armatus
ENSNBRG00000012196	rnpc3	97	95.376	ENSMZEG00005020233	rnpc3	100	95.720	Maylandia_zebra
ENSNBRG00000012196	rnpc3	86	56.484	ENSMGAG00000006381	RNPC3	99	56.484	Meleagris_gallopavo
ENSNBRG00000012196	rnpc3	93	54.397	ENSMAUG00000001358	Rnpc3	95	54.397	Mesocricetus_auratus
ENSNBRG00000012196	rnpc3	93	53.737	ENSMICG00000029591	RNPC3	95	53.737	Microcebus_murinus
ENSNBRG00000012196	rnpc3	93	54.361	ENSMOCG00000013423	Rnpc3	94	54.361	Microtus_ochrogaster
ENSNBRG00000012196	rnpc3	96	76.566	ENSMMOG00000005309	rnpc3	99	78.384	Mola_mola
ENSNBRG00000012196	rnpc3	94	55.828	ENSMODG00000002946	RNPC3	95	55.828	Monodelphis_domestica
ENSNBRG00000012196	rnpc3	95	76.587	ENSMALG00000015471	rnpc3	99	76.587	Monopterus_albus
ENSNBRG00000012196	rnpc3	93	54.786	MGP_CAROLIEiJ_G0025555	Rnpc3	96	54.786	Mus_caroli
ENSNBRG00000012196	rnpc3	93	54.970	ENSMUSG00000027981	Rnpc3	99	53.319	Mus_musculus
ENSNBRG00000012196	rnpc3	93	54.564	MGP_PahariEiJ_G0027001	Rnpc3	96	54.564	Mus_pahari
ENSNBRG00000012196	rnpc3	93	51.473	MGP_SPRETEiJ_G0026505	Rnpc3	96	54.767	Mus_spretus
ENSNBRG00000012196	rnpc3	93	54.490	ENSMPUG00000007349	RNPC3	94	54.049	Mustela_putorius_furo
ENSNBRG00000012196	rnpc3	93	54.234	ENSMLUG00000028743	RNPC3	94	54.234	Myotis_lucifugus
ENSNBRG00000012196	rnpc3	93	54.361	ENSNGAG00000010939	Rnpc3	95	54.361	Nannospalax_galili
ENSNBRG00000012196	rnpc3	93	54.251	ENSNLEG00000012013	RNPC3	95	54.251	Nomascus_leucogenys
ENSNBRG00000012196	rnpc3	93	52.834	ENSODEG00000007612	RNPC3	95	52.834	Octodon_degus
ENSNBRG00000012196	rnpc3	97	93.346	ENSONIG00000004770	rnpc3	100	94.057	Oreochromis_niloticus
ENSNBRG00000012196	rnpc3	88	56.009	ENSOANG00000008220	RNPC3	99	56.009	Ornithorhynchus_anatinus
ENSNBRG00000012196	rnpc3	97	52.611	ENSOCUG00000004016	RNPC3	95	53.737	Oryctolagus_cuniculus
ENSNBRG00000012196	rnpc3	96	77.510	ENSORLG00000005694	rnpc3	99	77.264	Oryzias_latipes
ENSNBRG00000012196	rnpc3	96	77.465	ENSORLG00020005513	rnpc3	99	77.600	Oryzias_latipes_hni
ENSNBRG00000012196	rnpc3	96	77.264	ENSORLG00015002179	rnpc3	99	77.264	Oryzias_latipes_hsok
ENSNBRG00000012196	rnpc3	96	78.068	ENSOMEG00000017737	rnpc3	99	78.068	Oryzias_melastigma
ENSNBRG00000012196	rnpc3	93	54.656	ENSOGAG00000026182	RNPC3	95	54.656	Otolemur_garnettii
ENSNBRG00000012196	rnpc3	93	55.152	ENSOARG00000018719	RNPC3	95	54.656	Ovis_aries
ENSNBRG00000012196	rnpc3	93	54.032	ENSPPAG00000037459	RNPC3	95	54.032	Pan_paniscus
ENSNBRG00000012196	rnpc3	94	48.660	ENSPPAG00000030278	-	97	48.660	Pan_paniscus
ENSNBRG00000012196	rnpc3	93	54.472	ENSPPRG00000020246	RNPC3	94	54.472	Panthera_pardus
ENSNBRG00000012196	rnpc3	93	54.472	ENSPTIG00000009887	RNPC3	96	54.472	Panthera_tigris_altaica
ENSNBRG00000012196	rnpc3	94	48.041	ENSPTRG00000044227	-	97	48.041	Pan_troglodytes
ENSNBRG00000012196	rnpc3	93	53.939	ENSPTRG00000033902	RNPC3	95	53.939	Pan_troglodytes
ENSNBRG00000012196	rnpc3	93	44.467	ENSPANG00000029957	-	96	42.308	Papio_anubis
ENSNBRG00000012196	rnpc3	93	54.251	ENSPANG00000012137	RNPC3	94	54.251	Papio_anubis
ENSNBRG00000012196	rnpc3	97	65.234	ENSPKIG00000008828	rnpc3	99	63.086	Paramormyrops_kingsleyae
ENSNBRG00000012196	rnpc3	62	53.517	ENSPSIG00000007396	RNPC3	99	54.740	Pelodiscus_sinensis
ENSNBRG00000012196	rnpc3	96	65.878	ENSPMGG00000011742	rnpc3	98	65.606	Periophthalmus_magnuspinnatus
ENSNBRG00000012196	rnpc3	89	50.851	ENSPEMG00000020112	Rnpc3	99	52.088	Peromyscus_maniculatus_bairdii
ENSNBRG00000012196	rnpc3	92	41.843	ENSPMAG00000003778	rnpc3	95	44.576	Petromyzon_marinus
ENSNBRG00000012196	rnpc3	94	56.442	ENSPCIG00000004415	-	95	56.442	Phascolarctos_cinereus
ENSNBRG00000012196	rnpc3	96	79.882	ENSPFOG00000009895	rnpc3	99	79.882	Poecilia_formosa
ENSNBRG00000012196	rnpc3	96	79.684	ENSPLAG00000012023	rnpc3	99	79.684	Poecilia_latipinna
ENSNBRG00000012196	rnpc3	99	78.736	ENSPMEG00000003663	rnpc3	99	80.079	Poecilia_mexicana
ENSNBRG00000012196	rnpc3	96	79.406	ENSPREG00000010206	rnpc3	99	79.406	Poecilia_reticulata
ENSNBRG00000012196	rnpc3	77	50.000	ENSPPYG00000001102	RNPC3	93	50.242	Pongo_abelii
ENSNBRG00000012196	rnpc3	97	99.197	ENSPNYG00000020603	rnpc3	100	99.197	Pundamilia_nyererei
ENSNBRG00000012196	rnpc3	98	57.905	ENSPNAG00000000524	rnpc3	92	58.880	Pygocentrus_nattereri
ENSNBRG00000012196	rnpc3	93	54.065	ENSRNOG00000017310	Rnpc3	95	54.065	Rattus_norvegicus
ENSNBRG00000012196	rnpc3	93	51.008	ENSRBIG00000043897	RNPC3	94	51.008	Rhinopithecus_bieti
ENSNBRG00000012196	rnpc3	93	54.141	ENSRROG00000032334	RNPC3	94	54.141	Rhinopithecus_roxellana
ENSNBRG00000012196	rnpc3	93	54.453	ENSSBOG00000024473	RNPC3	95	54.453	Saimiri_boliviensis_boliviensis
ENSNBRG00000012196	rnpc3	94	55.466	ENSSHAG00000011859	RNPC3	95	55.466	Sarcophilus_harrisii
ENSNBRG00000012196	rnpc3	96	68.119	ENSSFOG00015013055	rnpc3	99	69.672	Scleropages_formosus
ENSNBRG00000012196	rnpc3	96	79.297	ENSSMAG00000020346	rnpc3	99	79.297	Scophthalmus_maximus
ENSNBRG00000012196	rnpc3	96	84.314	ENSSDUG00000006600	rnpc3	99	84.314	Seriola_dumerili
ENSNBRG00000012196	rnpc3	96	84.314	ENSSLDG00000007979	rnpc3	99	84.314	Seriola_lalandi_dorsalis
ENSNBRG00000012196	rnpc3	93	53.320	ENSSPUG00000003872	-	92	53.320	Sphenodon_punctatus
ENSNBRG00000012196	rnpc3	94	55.758	ENSSPUG00000008539	-	95	55.758	Sphenodon_punctatus
ENSNBRG00000012196	rnpc3	96	84.569	ENSSPAG00000005633	rnpc3	99	83.567	Stegastes_partitus
ENSNBRG00000012196	rnpc3	93	53.452	ENSSSCG00000037254	RNPC3	95	55.172	Sus_scrofa
ENSNBRG00000012196	rnpc3	86	57.047	ENSTGUG00000004795	-	99	57.047	Taeniopygia_guttata
ENSNBRG00000012196	rnpc3	96	76.693	ENSTNIG00000018963	rnpc3	99	76.693	Tetraodon_nigroviridis
ENSNBRG00000012196	rnpc3	93	54.767	ENSUMAG00000007775	RNPC3	96	54.767	Ursus_maritimus
ENSNBRG00000012196	rnpc3	93	54.564	ENSVVUG00000000331	RNPC3	94	54.564	Vulpes_vulpes
ENSNBRG00000012196	rnpc3	93	44.622	ENSXETG00000025027	rnpc3	96	43.888	Xenopus_tropicalis
ENSNBRG00000012196	rnpc3	50	78.788	ENSXCOG00000005013	rnpc3	99	78.150	Xiphophorus_couchianus
ENSNBRG00000012196	rnpc3	96	78.698	ENSXMAG00000006495	rnpc3	99	78.698	Xiphophorus_maculatus