EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000012219 (Gene tree)
Gene ID: 102789848
Gene Symbol: -
Alias: PKR
Full Name: interferon-induced%2C double-stranded RNA-activated protein kinase-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 12301 bases
Position: chrJH422447.1:25800-38100
Accession: 102789848
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000015862	dsrm	PF00035.26	8.9e-35	1	2
ENSNBRP00000015862	dsrm	PF00035.26	8.9e-35	2	2
ENSNBRP00000015842	dsrm	PF00035.26	1e-34	1	2
ENSNBRP00000015842	dsrm	PF00035.26	1e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000016292	-	1944	-	ENSNBRP00000015862	647 (aa)	-	-
ENSNBRT00000016271	-	2019	XM_006806919	ENSNBRP00000015842	672 (aa)	XP_006806982	-

Gene Model

Click here to download ENSNBRG00000012219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000012219's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000012219	-	100	72.633	ENSNBRG00000019369	-	100	72.633
ENSNBRG00000012219	-	99	44.990	ENSNBRG00000019433	-	96	56.550
ENSNBRG00000012219	-	99	57.396	ENSNBRG00000011967	eif2ak2	99	57.396

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000012219	-	99	51.599	ENSAPOG00000010706	eif2ak2	98	51.599	Acanthochromis_polyacanthus
ENSNBRG00000012219	-	99	61.236	ENSAPOG00000010636	-	99	60.955	Acanthochromis_polyacanthus
ENSNBRG00000012219	-	86	58.763	ENSAPOG00000010662	eif2ak2	96	46.895	Acanthochromis_polyacanthus
ENSNBRG00000012219	-	100	81.600	ENSACIG00000006777	eif2ak2	100	81.600	Amphilophus_citrinellus
ENSNBRG00000012219	-	99	72.474	ENSACIG00000007027	eif2ak2	99	72.474	Amphilophus_citrinellus
ENSNBRG00000012219	-	79	48.077	ENSACIG00000006710	-	98	47.569	Amphilophus_citrinellus
ENSNBRG00000012219	-	99	60.123	ENSACIG00000006536	eif2ak2	99	60.123	Amphilophus_citrinellus
ENSNBRG00000012219	-	67	59.532	ENSACIG00000006955	-	94	59.532	Amphilophus_citrinellus
ENSNBRG00000012219	-	99	61.818	ENSAOCG00000003414	-	99	62.098	Amphiprion_ocellaris
ENSNBRG00000012219	-	85	59.170	ENSAOCG00000003397	eif2ak2	98	45.614	Amphiprion_ocellaris
ENSNBRG00000012219	-	92	63.481	ENSAPEG00000023879	eif2ak2	99	45.397	Amphiprion_percula
ENSNBRG00000012219	-	99	64.095	ENSAPEG00000023675	eif2ak2	99	64.042	Amphiprion_percula
ENSNBRG00000012219	-	99	61.250	ENSATEG00000015063	eif2ak2	99	61.250	Anabas_testudineus
ENSNBRG00000012219	-	99	58.125	ENSATEG00000015425	eif2ak2	99	58.125	Anabas_testudineus
ENSNBRG00000012219	-	99	61.239	ENSATEG00000015535	eif2ak2	99	60.663	Anabas_testudineus
ENSNBRG00000012219	-	82	53.524	ENSACLG00000023843	-	99	53.407	Astatotilapia_calliptera
ENSNBRG00000012219	-	96	41.705	ENSAMXG00000003716	eif2ak2	99	40.803	Astyanax_mexicanus
ENSNBRG00000012219	-	99	47.970	ENSCSEG00000012820	-	99	59.459	Cynoglossus_semilaevis
ENSNBRG00000012219	-	99	39.235	ENSCSEG00000012878	eif2ak2	99	39.660	Cynoglossus_semilaevis
ENSNBRG00000012219	-	99	52.041	ENSCVAG00000014725	eif2ak2	99	70.833	Cyprinodon_variegatus
ENSNBRG00000012219	-	60	55.660	ENSCVAG00000003185	-	96	54.400	Cyprinodon_variegatus
ENSNBRG00000012219	-	99	40.922	ENSDARG00000068729	eif2ak2	99	41.354	Danio_rerio
ENSNBRG00000012219	-	98	49.826	ENSELUG00000018164	eif2ak2	96	49.826	Esox_lucius
ENSNBRG00000012219	-	85	41.290	ENSGMOG00000018784	eif2ak2	99	50.730	Gadus_morhua
ENSNBRG00000012219	-	83	40.050	ENSGMOG00000018813	eif2ak2	96	51.822	Gadus_morhua
ENSNBRG00000012219	-	84	53.676	ENSGAFG00000005231	-	99	48.780	Gambusia_affinis
ENSNBRG00000012219	-	90	49.828	ENSHBUG00000022216	-	91	54.777	Haplochromis_burtoni
ENSNBRG00000012219	-	99	50.435	ENSHBUG00000022151	-	95	46.091	Haplochromis_burtoni
ENSNBRG00000012219	-	99	48.649	ENSHCOG00000010443	-	99	48.214	Hippocampus_comes
ENSNBRG00000012219	-	97	41.395	ENSIPUG00000019933	eif2ak2	97	42.222	Ictalurus_punctatus
ENSNBRG00000012219	-	98	60.624	ENSMAMG00000017342	eif2ak2	99	67.812	Mastacembelus_armatus
ENSNBRG00000012219	-	99	44.785	ENSMAMG00000017311	eif2ak2	99	44.785	Mastacembelus_armatus
ENSNBRG00000012219	-	88	58.333	ENSMZEG00005009773	eif2ak2	99	53.793	Maylandia_zebra
ENSNBRG00000012219	-	99	51.026	ENSMZEG00005009825	eif2ak2	99	51.026	Maylandia_zebra
ENSNBRG00000012219	-	98	57.599	ENSMMOG00000000711	-	97	57.599	Mola_mola
ENSNBRG00000012219	-	99	71.605	ENSMALG00000005083	eif2ak2	99	71.605	Monopterus_albus
ENSNBRG00000012219	-	99	41.424	ENSMALG00000005115	eif2ak2	98	41.752	Monopterus_albus
ENSNBRG00000012219	-	99	47.308	ENSONIG00000010933	-	100	51.367	Oreochromis_niloticus
ENSNBRG00000012219	-	99	46.539	ENSORLG00000012432	eif2ak2	99	46.392	Oryzias_latipes
ENSNBRG00000012219	-	99	48.217	ENSORLG00000018980	-	99	48.271	Oryzias_latipes
ENSNBRG00000012219	-	99	45.399	ENSORLG00020014073	eif2ak2	99	48.772	Oryzias_latipes_hni
ENSNBRG00000012219	-	99	48.359	ENSORLG00020014108	-	99	48.415	Oryzias_latipes_hni
ENSNBRG00000012219	-	99	42.020	ENSORLG00015023155	eif2ak2	98	54.688	Oryzias_latipes_hsok
ENSNBRG00000012219	-	99	48.359	ENSORLG00015023149	eif2ak2	99	48.271	Oryzias_latipes_hsok
ENSNBRG00000012219	-	99	45.575	ENSOMEG00000019857	eif2ak2	99	53.968	Oryzias_melastigma
ENSNBRG00000012219	-	92	47.771	ENSOMEG00000019925	-	100	47.771	Oryzias_melastigma
ENSNBRG00000012219	-	99	41.449	ENSPKIG00000024036	eif2ak2	99	41.594	Paramormyrops_kingsleyae
ENSNBRG00000012219	-	77	52.000	ENSPMGG00000001624	-	96	52.000	Periophthalmus_magnuspinnatus
ENSNBRG00000012219	-	99	52.790	ENSPMGG00000001652	eif2ak2	97	69.048	Periophthalmus_magnuspinnatus
ENSNBRG00000012219	-	99	56.897	ENSPLAG00000023307	-	99	65.217	Poecilia_latipinna
ENSNBRG00000012219	-	86	53.138	ENSPMEG00000013631	eif2ak2	99	43.047	Poecilia_mexicana
ENSNBRG00000012219	-	99	54.506	ENSPMEG00000013612	-	99	54.506	Poecilia_mexicana
ENSNBRG00000012219	-	98	41.167	ENSPREG00000007905	-	98	41.167	Poecilia_reticulata
ENSNBRG00000012219	-	99	57.647	ENSPNYG00000014187	eif2ak2	99	57.647	Pundamilia_nyererei
ENSNBRG00000012219	-	96	44.912	ENSPNYG00000023883	-	99	43.601	Pundamilia_nyererei
ENSNBRG00000012219	-	99	76.799	ENSPNYG00000014220	-	99	77.320	Pundamilia_nyererei
ENSNBRG00000012219	-	99	44.444	ENSPNAG00000000508	eif2ak2	99	42.593	Pygocentrus_nattereri
ENSNBRG00000012219	-	97	48.381	ENSSMAG00000010296	-	96	55.882	Scophthalmus_maximus
ENSNBRG00000012219	-	99	63.286	ENSSDUG00000002837	eif2ak2	99	63.286	Seriola_dumerili
ENSNBRG00000012219	-	98	47.242	ENSSDUG00000002922	eif2ak2	99	47.666	Seriola_dumerili
ENSNBRG00000012219	-	99	55.571	ENSSLDG00000024874	eif2ak2	99	55.983	Seriola_lalandi_dorsalis
ENSNBRG00000012219	-	87	58.725	ENSSLDG00000024886	-	99	47.814	Seriola_lalandi_dorsalis
ENSNBRG00000012219	-	56	68.812	ENSSLDG00000024867	eif2ak2	99	46.154	Seriola_lalandi_dorsalis
ENSNBRG00000012219	-	99	64.095	ENSSLDG00000024893	-	99	63.877	Seriola_lalandi_dorsalis
ENSNBRG00000012219	-	56	44.474	ENSSPAG00000007476	-	81	43.622	Stegastes_partitus
ENSNBRG00000012219	-	98	46.445	ENSSPAG00000007629	-	98	48.025	Stegastes_partitus
ENSNBRG00000012219	-	92	54.386	ENSTRUG00000022205	-	97	54.386	Takifugu_rubripes
ENSNBRG00000012219	-	93	39.474	ENSXETG00000009025	pkr2	99	39.474	Xenopus_tropicalis
ENSNBRG00000012219	-	86	41.882	ENSXCOG00000006961	-	97	41.882	Xiphophorus_couchianus
ENSNBRG00000012219	-	93	54.740	ENSXMAG00000006521	eif2ak2	99	54.740	Xiphophorus_maculatus
ENSNBRG00000012219	-	98	45.220	ENSXMAG00000006536	eif2ak2	97	51.379	Xiphophorus_maculatus