EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000012335 (Gene tree)
Gene ID: -
Gene Symbol: rasef
Alias: si:ch73-275j21.1
Full Name: ras and EF-hand domain-containing protein-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 21463 bases
Position: chrJH422289.1:2065905-2087367
Accession: 102780880
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000015979	MMR_HSR1	PF01926.23	5.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000016411	-	1827	XM_006789755	ENSNBRP00000015979	608 (aa)	XP_006789818	-

Gene Model

Click here to download ENSNBRG00000012335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000012335's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000012335	rasef	68	44.444	ENSNBRG00000015888	CRACR2A	76	45.270
ENSNBRG00000012335	rasef	70	43.293	ENSNBRG00000005924	cracr2ab	72	43.293

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000012335	rasef	99	48.883	ENSG00000165105	RASEF	95	48.743	Homo_sapiens
ENSNBRG00000012335	rasef	99	75.822	ENSAPOG00000024369	rasef	95	75.822	Acanthochromis_polyacanthus
ENSNBRG00000012335	rasef	97	49.432	ENSAMEG00000009467	RASEF	94	49.574	Ailuropoda_melanoleuca
ENSNBRG00000012335	rasef	99	80.312	ENSACIG00000005549	rasef	98	80.312	Amphilophus_citrinellus
ENSNBRG00000012335	rasef	99	75.563	ENSAOCG00000011464	rasef	96	75.563	Amphiprion_ocellaris
ENSNBRG00000012335	rasef	99	75.221	ENSAPEG00000003461	rasef	95	75.516	Amphiprion_percula
ENSNBRG00000012335	rasef	99	65.685	ENSATEG00000015032	rasef	100	66.077	Anabas_testudineus
ENSNBRG00000012335	rasef	83	49.570	ENSAPLG00000013969	RASEF	90	49.570	Anas_platyrhynchos
ENSNBRG00000012335	rasef	99	50.504	ENSACAG00000002155	RASEF	95	47.067	Anolis_carolinensis
ENSNBRG00000012335	rasef	99	48.954	ENSANAG00000035226	RASEF	95	48.954	Aotus_nancymaae
ENSNBRG00000012335	rasef	99	73.824	ENSACLG00000017818	rasef	95	73.824	Astatotilapia_calliptera
ENSNBRG00000012335	rasef	99	53.085	ENSAMXG00000011411	rasef	94	53.295	Astyanax_mexicanus
ENSNBRG00000012335	rasef	98	50.870	ENSBTAG00000021751	RASEF	94	51.014	Bos_taurus
ENSNBRG00000012335	rasef	99	49.162	ENSCJAG00000003547	RASEF	94	49.162	Callithrix_jacchus
ENSNBRG00000012335	rasef	96	52.246	ENSCAFG00000001453	RASEF	87	48.295	Canis_familiaris
ENSNBRG00000012335	rasef	96	52.413	ENSCAFG00020023859	RASEF	95	49.101	Canis_lupus_dingo
ENSNBRG00000012335	rasef	99	49.512	ENSCHIG00000020336	RASEF	92	52.551	Capra_hircus
ENSNBRG00000012335	rasef	70	50.400	ENSTSYG00000006987	RASEF	93	50.400	Carlito_syrichta
ENSNBRG00000012335	rasef	72	44.720	ENSCAPG00000010585	-	100	44.720	Cavia_aperea
ENSNBRG00000012335	rasef	82	50.519	ENSCPOG00000005004	RASEF	94	50.519	Cavia_porcellus
ENSNBRG00000012335	rasef	99	49.162	ENSCCAG00000031624	RASEF	94	49.162	Cebus_capucinus
ENSNBRG00000012335	rasef	69	44.804	ENSCLAG00000004622	-	86	44.804	Chinchilla_lanigera
ENSNBRG00000012335	rasef	99	49.369	ENSCSAG00000007663	RASEF	95	49.369	Chlorocebus_sabaeus
ENSNBRG00000012335	rasef	86	49.500	ENSCHOG00000001831	RASEF	97	49.500	Choloepus_hoffmanni
ENSNBRG00000012335	rasef	99	50.514	ENSCPBG00000019037	RASEF	94	50.808	Chrysemys_picta_bellii
ENSNBRG00000012335	rasef	99	48.743	ENSCANG00000034081	RASEF	95	48.603	Colobus_angolensis_palliatus
ENSNBRG00000012335	rasef	82	51.134	ENSCGRG00001001324	Rasef	94	51.134	Cricetulus_griseus_chok1gshd
ENSNBRG00000012335	rasef	76	50.372	ENSCGRG00000006455	Rasef	94	50.372	Cricetulus_griseus_crigri
ENSNBRG00000012335	rasef	96	66.828	ENSCSEG00000017898	rasef	93	66.828	Cynoglossus_semilaevis
ENSNBRG00000012335	rasef	99	60.825	ENSCVAG00000006168	rasef	93	61.119	Cyprinodon_variegatus
ENSNBRG00000012335	rasef	99	52.958	ENSDARG00000076250	rasef	99	50.896	Danio_rerio
ENSNBRG00000012335	rasef	99	50.069	ENSDNOG00000006002	RASEF	87	50.069	Dasypus_novemcinctus
ENSNBRG00000012335	rasef	75	50.000	ENSDORG00000015570	Rasef	94	50.285	Dipodomys_ordii
ENSNBRG00000012335	rasef	99	41.543	ENSEBUG00000012629	rasef	96	41.543	Eptatretus_burgeri
ENSNBRG00000012335	rasef	59	56.667	ENSEBUG00000012179	rasef	62	56.667	Eptatretus_burgeri
ENSNBRG00000012335	rasef	99	52.053	ENSEASG00005015967	RASEF	94	52.053	Equus_asinus_asinus
ENSNBRG00000012335	rasef	99	51.301	ENSECAG00000000324	RASEF	95	51.301	Equus_caballus
ENSNBRG00000012335	rasef	82	50.000	ENSEEUG00000008455	RASEF	100	50.000	Erinaceus_europaeus
ENSNBRG00000012335	rasef	99	49.300	ENSFCAG00000002416	RASEF	94	49.860	Felis_catus
ENSNBRG00000012335	rasef	82	52.586	ENSFDAG00000013428	RASEF	94	52.586	Fukomys_damarensis
ENSNBRG00000012335	rasef	99	69.970	ENSFHEG00000022470	rasef	92	69.970	Fundulus_heteroclitus
ENSNBRG00000012335	rasef	86	86.127	ENSGMOG00000010090	rasef	100	84.746	Gadus_morhua
ENSNBRG00000012335	rasef	99	48.429	ENSGALG00000012576	RASEF	97	48.711	Gallus_gallus
ENSNBRG00000012335	rasef	100	71.010	ENSGAFG00000013735	rasef	94	71.010	Gambusia_affinis
ENSNBRG00000012335	rasef	94	61.889	ENSGAGG00000007338	RASEF	95	45.560	Gopherus_agassizii
ENSNBRG00000012335	rasef	99	48.883	ENSGGOG00000006651	RASEF	95	48.883	Gorilla_gorilla
ENSNBRG00000012335	rasef	99	73.499	ENSHBUG00000010345	rasef	95	73.353	Haplochromis_burtoni
ENSNBRG00000012335	rasef	99	49.501	ENSHGLG00000000399	RASEF	94	49.501	Heterocephalus_glaber_female
ENSNBRG00000012335	rasef	82	51.910	ENSHGLG00100008043	RASEF	94	51.910	Heterocephalus_glaber_male
ENSNBRG00000012335	rasef	99	62.179	ENSHCOG00000010976	rasef	95	62.179	Hippocampus_comes
ENSNBRG00000012335	rasef	96	62.701	ENSIPUG00000008768	rasef	80	62.701	Ictalurus_punctatus
ENSNBRG00000012335	rasef	99	48.252	ENSSTOG00000004311	RASEF	95	48.464	Ictidomys_tridecemlineatus
ENSNBRG00000012335	rasef	82	52.076	ENSJJAG00000023215	Rasef	94	52.069	Jaculus_jaculus
ENSNBRG00000012335	rasef	99	60.895	ENSKMAG00000021106	rasef	85	61.039	Kryptolebias_marmoratus
ENSNBRG00000012335	rasef	99	67.449	ENSLBEG00000021098	-	94	68.232	Labrus_bergylta
ENSNBRG00000012335	rasef	99	51.585	ENSLACG00000010849	RASEF	95	51.873	Latimeria_chalumnae
ENSNBRG00000012335	rasef	99	55.162	ENSLOCG00000002094	rasef	94	55.162	Lepisosteus_oculatus
ENSNBRG00000012335	rasef	83	52.604	ENSLAFG00000010552	RASEF	94	52.604	Loxodonta_africana
ENSNBRG00000012335	rasef	99	48.743	ENSMFAG00000046414	RASEF	95	49.162	Macaca_fascicularis
ENSNBRG00000012335	rasef	99	48.540	ENSMNEG00000044341	RASEF	95	48.957	Macaca_nemestrina
ENSNBRG00000012335	rasef	99	48.883	ENSMLEG00000034579	RASEF	95	49.302	Mandrillus_leucophaeus
ENSNBRG00000012335	rasef	90	60.835	ENSMAMG00000001536	rasef	97	62.761	Mastacembelus_armatus
ENSNBRG00000012335	rasef	99	89.052	ENSMZEG00005004819	rasef	99	89.052	Maylandia_zebra
ENSNBRG00000012335	rasef	82	51.389	ENSMAUG00000010820	Rasef	94	51.389	Mesocricetus_auratus
ENSNBRG00000012335	rasef	97	48.933	ENSMICG00000011836	RASEF	94	49.581	Microcebus_murinus
ENSNBRG00000012335	rasef	83	50.947	ENSMOCG00000000943	Rasef	94	50.279	Microtus_ochrogaster
ENSNBRG00000012335	rasef	99	68.252	ENSMMOG00000000102	rasef	96	68.252	Mola_mola
ENSNBRG00000012335	rasef	99	48.596	ENSMODG00000009037	RASEF	95	49.017	Monodelphis_domestica
ENSNBRG00000012335	rasef	99	68.935	ENSMALG00000009830	rasef	95	66.568	Monopterus_albus
ENSNBRG00000012335	rasef	83	51.127	MGP_CAROLIEiJ_G0026109	Rasef	94	50.652	Mus_caroli
ENSNBRG00000012335	rasef	99	50.659	ENSMUSG00000043003	Rasef	94	50.838	Mus_musculus
ENSNBRG00000012335	rasef	82	51.042	MGP_PahariEiJ_G0028447	Rasef	94	50.652	Mus_pahari
ENSNBRG00000012335	rasef	83	51.473	MGP_SPRETEiJ_G0027075	Rasef	94	51.024	Mus_spretus
ENSNBRG00000012335	rasef	76	49.257	ENSMPUG00000013070	RASEF	94	49.257	Mustela_putorius_furo
ENSNBRG00000012335	rasef	99	48.883	ENSMLUG00000013108	RASEF	94	49.231	Myotis_lucifugus
ENSNBRG00000012335	rasef	76	51.571	ENSNGAG00000014878	Rasef	94	51.571	Nannospalax_galili
ENSNBRG00000012335	rasef	99	48.464	ENSNLEG00000003245	RASEF	95	48.883	Nomascus_leucogenys
ENSNBRG00000012335	rasef	99	45.582	ENSMEUG00000016412	RASEF	94	45.863	Notamacropus_eugenii
ENSNBRG00000012335	rasef	88	50.000	ENSOPRG00000002742	-	80	50.000	Ochotona_princeps
ENSNBRG00000012335	rasef	99	80.636	ENSONIG00000015021	rasef	99	80.636	Oreochromis_niloticus
ENSNBRG00000012335	rasef	99	45.961	ENSOANG00000010379	RASEF	95	45.822	Ornithorhynchus_anatinus
ENSNBRG00000012335	rasef	99	47.759	ENSOCUG00000001548	RASEF	94	47.759	Oryctolagus_cuniculus
ENSNBRG00000012335	rasef	99	57.247	ENSORLG00000005076	rasef	92	57.247	Oryzias_latipes
ENSNBRG00000012335	rasef	99	58.571	ENSORLG00020020049	rasef	92	56.955	Oryzias_latipes_hni
ENSNBRG00000012335	rasef	99	58.571	ENSORLG00015008479	rasef	92	58.126	Oryzias_latipes_hsok
ENSNBRG00000012335	rasef	99	57.227	ENSOMEG00000023457	rasef	99	57.375	Oryzias_melastigma
ENSNBRG00000012335	rasef	83	52.931	ENSOGAG00000012724	RASEF	94	52.931	Otolemur_garnettii
ENSNBRG00000012335	rasef	100	49.246	ENSOARG00000009073	RASEF	90	49.383	Ovis_aries
ENSNBRG00000012335	rasef	99	50.145	ENSPPAG00000042152	RASEF	94	50.434	Pan_paniscus
ENSNBRG00000012335	rasef	99	49.093	ENSPPRG00000008487	RASEF	94	49.651	Panthera_pardus
ENSNBRG00000012335	rasef	86	53.000	ENSPTIG00000006676	RASEF	90	50.200	Panthera_tigris_altaica
ENSNBRG00000012335	rasef	99	50.145	ENSPTRG00000021052	RASEF	94	50.434	Pan_troglodytes
ENSNBRG00000012335	rasef	99	49.302	ENSPANG00000024899	RASEF	95	49.721	Papio_anubis
ENSNBRG00000012335	rasef	87	50.166	ENSPSIG00000017699	RASEF	92	50.497	Pelodiscus_sinensis
ENSNBRG00000012335	rasef	99	61.086	ENSPMGG00000015499	rasef	86	92.157	Periophthalmus_magnuspinnatus
ENSNBRG00000012335	rasef	82	50.868	ENSPEMG00000002797	Rasef	94	50.868	Peromyscus_maniculatus_bairdii
ENSNBRG00000012335	rasef	93	51.899	ENSPMAG00000001634	rasef	85	52.532	Petromyzon_marinus
ENSNBRG00000012335	rasef	99	47.899	ENSPCIG00000027655	RASEF	95	47.899	Phascolarctos_cinereus
ENSNBRG00000012335	rasef	99	70.301	ENSPFOG00000018924	rasef	95	70.301	Poecilia_formosa
ENSNBRG00000012335	rasef	82	67.086	ENSPLAG00000022907	RASEF	91	67.086	Poecilia_latipinna
ENSNBRG00000012335	rasef	99	66.519	ENSPMEG00000006546	rasef	95	66.519	Poecilia_mexicana
ENSNBRG00000012335	rasef	100	71.303	ENSPREG00000018728	rasef	93	71.303	Poecilia_reticulata
ENSNBRG00000012335	rasef	99	48.743	ENSPPYG00000019320	RASEF	95	48.883	Pongo_abelii
ENSNBRG00000012335	rasef	99	49.304	ENSPCOG00000022979	RASEF	94	49.721	Propithecus_coquereli
ENSNBRG00000012335	rasef	99	48.531	ENSPVAG00000003682	RASEF	94	49.086	Pteropus_vampyrus
ENSNBRG00000012335	rasef	99	83.881	ENSPNYG00000010579	rasef	95	83.881	Pundamilia_nyererei
ENSNBRG00000012335	rasef	50	64.217	ENSPNAG00000016447	rasef	95	53.644	Pygocentrus_nattereri
ENSNBRG00000012335	rasef	99	49.707	ENSRNOG00000024190	Rasef	94	49.707	Rattus_norvegicus
ENSNBRG00000012335	rasef	99	49.022	ENSRBIG00000039516	RASEF	95	48.883	Rhinopithecus_bieti
ENSNBRG00000012335	rasef	99	49.162	ENSRROG00000044397	RASEF	99	49.022	Rhinopithecus_roxellana
ENSNBRG00000012335	rasef	99	47.917	ENSSBOG00000029298	RASEF	94	47.917	Saimiri_boliviensis_boliviensis
ENSNBRG00000012335	rasef	99	55.087	ENSSFOG00015009014	rasef	95	55.087	Scleropages_formosus
ENSNBRG00000012335	rasef	99	65.743	ENSSMAG00000000942	rasef	95	65.743	Scophthalmus_maximus
ENSNBRG00000012335	rasef	98	75.208	ENSSDUG00000022228	rasef	93	75.372	Seriola_dumerili
ENSNBRG00000012335	rasef	99	75.325	ENSSLDG00000001784	rasef	90	75.325	Seriola_lalandi_dorsalis
ENSNBRG00000012335	rasef	99	49.415	ENSSPUG00000002899	RASEF	95	48.126	Sphenodon_punctatus
ENSNBRG00000012335	rasef	99	69.408	ENSSPAG00000002442	rasef	92	69.553	Stegastes_partitus
ENSNBRG00000012335	rasef	86	53.010	ENSSSCG00000040707	-	88	53.010	Sus_scrofa
ENSNBRG00000012335	rasef	99	46.220	ENSTGUG00000003216	RASEF	94	46.220	Taeniopygia_guttata
ENSNBRG00000012335	rasef	99	72.148	ENSTRUG00000011541	rasef	95	72.148	Takifugu_rubripes
ENSNBRG00000012335	rasef	99	64.888	ENSTNIG00000006010	rasef	95	64.888	Tetraodon_nigroviridis
ENSNBRG00000012335	rasef	99	45.315	ENSTTRG00000002061	RASEF	94	45.594	Tursiops_truncatus
ENSNBRG00000012335	rasef	99	50.360	ENSUAMG00000021591	RASEF	94	50.360	Ursus_americanus
ENSNBRG00000012335	rasef	83	52.241	ENSUMAG00000004670	RASEF	89	52.241	Ursus_maritimus
ENSNBRG00000012335	rasef	84	51.597	ENSVVUG00000029736	RASEF	92	51.973	Vulpes_vulpes
ENSNBRG00000012335	rasef	99	47.994	ENSXETG00000016758	mgc147600	95	47.994	Xenopus_tropicalis
ENSNBRG00000012335	rasef	82	60.545	ENSXCOG00000005178	rasef	83	60.545	Xiphophorus_couchianus
ENSNBRG00000012335	rasef	100	71.010	ENSXMAG00000015129	rasef	95	71.239	Xiphophorus_maculatus