EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000012376 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: si:ch211-231o6.2
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 1007 bases
Position: chrJH422311.1:4845948-4846954
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000015994	zf-C2H2	PF00096.26	6.4e-17	1	4
ENSNBRP00000015994	zf-C2H2	PF00096.26	6.4e-17	2	4
ENSNBRP00000015994	zf-C2H2	PF00096.26	6.4e-17	3	4
ENSNBRP00000015994	zf-C2H2	PF00096.26	6.4e-17	4	4
ENSNBRP00000015994	zf-met	PF12874.7	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000016426	-	390	-	ENSNBRP00000015994	129 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000012376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000012376's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000012376	-	98	36.111	ENSNBRG00000005175	zbtb41	62	36.111
ENSNBRG00000012376	-	98	38.889	ENSNBRG00000019770	-	84	36.893
ENSNBRG00000012376	-	100	39.552	ENSNBRG00000016564	-	80	39.552
ENSNBRG00000012376	-	98	45.588	ENSNBRG00000004822	-	50	45.588
ENSNBRG00000012376	-	98	37.288	ENSNBRG00000000321	-	99	37.719
ENSNBRG00000012376	-	94	42.222	ENSNBRG00000013604	-	72	38.583
ENSNBRG00000012376	-	100	40.909	ENSNBRG00000008123	-	79	41.406
ENSNBRG00000012376	-	98	37.008	ENSNBRG00000024048	-	84	37.008
ENSNBRG00000012376	-	100	37.121	ENSNBRG00000008827	znf319b	88	37.121
ENSNBRG00000012376	-	98	39.394	ENSNBRG00000016550	-	86	39.394
ENSNBRG00000012376	-	100	38.136	ENSNBRG00000024344	-	75	38.136
ENSNBRG00000012376	-	98	41.353	ENSNBRG00000024345	-	95	41.353
ENSNBRG00000012376	-	98	40.385	ENSNBRG00000000577	-	76	40.385
ENSNBRG00000012376	-	98	37.405	ENSNBRG00000003000	-	80	37.405
ENSNBRG00000012376	-	98	39.535	ENSNBRG00000021237	-	77	39.535
ENSNBRG00000012376	-	100	39.844	ENSNBRG00000005823	-	83	39.844
ENSNBRG00000012376	-	98	35.938	ENSNBRG00000024046	-	51	35.938
ENSNBRG00000012376	-	99	38.384	ENSNBRG00000004723	-	85	38.384
ENSNBRG00000012376	-	98	37.209	ENSNBRG00000021355	-	90	37.209
ENSNBRG00000012376	-	99	38.583	ENSNBRG00000007311	-	80	38.583
ENSNBRG00000012376	-	98	36.620	ENSNBRG00000004976	prdm5	53	36.620
ENSNBRG00000012376	-	98	37.984	ENSNBRG00000023960	-	66	37.984
ENSNBRG00000012376	-	98	37.984	ENSNBRG00000016582	-	82	37.984
ENSNBRG00000012376	-	98	40.845	ENSNBRG00000021998	-	53	40.845
ENSNBRG00000012376	-	99	42.373	ENSNBRG00000009815	-	92	42.373
ENSNBRG00000012376	-	100	40.506	ENSNBRG00000010405	-	83	40.000
ENSNBRG00000012376	-	98	39.831	ENSNBRG00000000305	-	78	39.831
ENSNBRG00000012376	-	99	37.963	ENSNBRG00000003250	-	89	36.842
ENSNBRG00000012376	-	99	40.000	ENSNBRG00000022241	-	83	40.000
ENSNBRG00000012376	-	100	36.364	ENSNBRG00000008223	-	78	36.296
ENSNBRG00000012376	-	98	38.462	ENSNBRG00000024019	-	91	38.462
ENSNBRG00000012376	-	98	34.127	ENSNBRG00000019004	-	61	34.127
ENSNBRG00000012376	-	95	56.250	ENSNBRG00000010351	-	88	56.250
ENSNBRG00000012376	-	99	37.313	ENSNBRG00000000492	-	67	37.313
ENSNBRG00000012376	-	100	39.316	ENSNBRG00000016666	-	97	39.316
ENSNBRG00000012376	-	99	44.094	ENSNBRG00000001608	-	94	44.094
ENSNBRG00000012376	-	99	37.815	ENSNBRG00000008106	-	93	37.815
ENSNBRG00000012376	-	100	39.823	ENSNBRG00000004557	-	61	39.823
ENSNBRG00000012376	-	99	40.157	ENSNBRG00000005805	-	95	40.157
ENSNBRG00000012376	-	98	38.235	ENSNBRG00000006757	-	68	38.889
ENSNBRG00000012376	-	98	39.683	ENSNBRG00000024014	-	58	39.683
ENSNBRG00000012376	-	98	41.379	ENSNBRG00000024066	-	80	41.379
ENSNBRG00000012376	-	98	40.000	ENSNBRG00000007384	-	50	40.000
ENSNBRG00000012376	-	100	39.098	ENSNBRG00000010194	-	63	39.098
ENSNBRG00000012376	-	98	56.522	ENSNBRG00000016234	-	66	56.522
ENSNBRG00000012376	-	99	41.935	ENSNBRG00000002542	-	82	41.935
ENSNBRG00000012376	-	100	37.838	ENSNBRG00000009075	znf236	57	35.461
ENSNBRG00000012376	-	99	36.275	ENSNBRG00000006411	-	75	36.275
ENSNBRG00000012376	-	98	34.307	ENSNBRG00000009811	-	86	34.307
ENSNBRG00000012376	-	95	37.864	ENSNBRG00000019481	-	93	37.500
ENSNBRG00000012376	-	98	35.165	ENSNBRG00000000708	-	91	35.165
ENSNBRG00000012376	-	98	40.000	ENSNBRG00000010987	-	72	40.000
ENSNBRG00000012376	-	99	33.835	ENSNBRG00000004381	-	71	32.283
ENSNBRG00000012376	-	100	39.048	ENSNBRG00000015652	-	83	39.048
ENSNBRG00000012376	-	98	41.463	ENSNBRG00000003124	-	89	40.777
ENSNBRG00000012376	-	94	39.683	ENSNBRG00000023956	-	54	39.683
ENSNBRG00000012376	-	100	40.741	ENSNBRG00000016603	-	89	40.741
ENSNBRG00000012376	-	99	39.683	ENSNBRG00000024179	-	60	39.683
ENSNBRG00000012376	-	99	39.394	ENSNBRG00000009279	-	90	39.394
ENSNBRG00000012376	-	98	36.090	ENSNBRG00000018718	zbtb47b	57	36.364
ENSNBRG00000012376	-	98	40.945	ENSNBRG00000006125	-	91	40.945
ENSNBRG00000012376	-	99	46.000	ENSNBRG00000014088	-	96	46.000
ENSNBRG00000012376	-	99	40.299	ENSNBRG00000024051	-	50	40.299
ENSNBRG00000012376	-	99	41.322	ENSNBRG00000004523	-	89	41.322
ENSNBRG00000012376	-	98	39.437	ENSNBRG00000016577	si:dkey-182i3.9	91	35.385
ENSNBRG00000012376	-	98	38.793	ENSNBRG00000016219	-	82	38.095
ENSNBRG00000012376	-	84	59.649	ENSNBRG00000001834	-	89	59.649
ENSNBRG00000012376	-	100	40.260	ENSNBRG00000015442	ZNF319	81	40.260
ENSNBRG00000012376	-	98	42.857	ENSNBRG00000015873	-	95	38.636
ENSNBRG00000012376	-	98	39.806	ENSNBRG00000000523	-	65	39.806
ENSNBRG00000012376	-	99	37.594	ENSNBRG00000005796	-	91	37.594
ENSNBRG00000012376	-	98	41.333	ENSNBRG00000024086	-	54	41.333
ENSNBRG00000012376	-	99	45.312	ENSNBRG00000016282	-	93	45.312
ENSNBRG00000012376	-	99	40.741	ENSNBRG00000023229	-	75	40.741
ENSNBRG00000012376	-	100	67.407	ENSNBRG00000012391	gfi1b	51	67.407
ENSNBRG00000012376	-	100	39.370	ENSNBRG00000024054	-	57	39.370
ENSNBRG00000012376	-	98	40.741	ENSNBRG00000001163	-	89	40.336
ENSNBRG00000012376	-	100	36.842	ENSNBRG00000004792	-	51	36.842
ENSNBRG00000012376	-	100	39.806	ENSNBRG00000016169	-	65	39.806
ENSNBRG00000012376	-	99	36.434	ENSNBRG00000009128	-	57	35.714
ENSNBRG00000012376	-	98	41.221	ENSNBRG00000013501	-	76	41.221
ENSNBRG00000012376	-	99	38.272	ENSNBRG00000001641	-	70	35.938
ENSNBRG00000012376	-	95	37.288	ENSNBRG00000000793	-	99	37.288
ENSNBRG00000012376	-	98	41.270	ENSNBRG00000000960	-	95	40.476
ENSNBRG00000012376	-	99	38.889	ENSNBRG00000013583	-	89	38.889
ENSNBRG00000012376	-	100	38.931	ENSNBRG00000021967	-	65	38.931
ENSNBRG00000012376	-	98	37.313	ENSNBRG00000024293	-	85	37.313
ENSNBRG00000012376	-	98	39.683	ENSNBRG00000024354	-	91	39.683
ENSNBRG00000012376	-	99	38.462	ENSNBRG00000005849	-	89	38.462
ENSNBRG00000012376	-	98	39.815	ENSNBRG00000007602	-	78	39.815
ENSNBRG00000012376	-	94	39.370	ENSNBRG00000024020	-	52	39.370
ENSNBRG00000012376	-	99	36.641	ENSNBRG00000024294	-	63	32.468
ENSNBRG00000012376	-	98	35.938	ENSNBRG00000002946	-	50	35.938
ENSNBRG00000012376	-	98	38.393	ENSNBRG00000002902	-	97	37.302

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000012376	-	100	67.407	ENSACIG00000002190	gfi1b	55	67.407	Amphilophus_citrinellus
ENSNBRG00000012376	-	100	67.407	ENSACLG00000027053	gfi1b	52	67.407	Astatotilapia_calliptera
ENSNBRG00000012376	-	100	62.222	ENSCAPG00000010404	GFI1B	56	50.299	Cavia_aperea
ENSNBRG00000012376	-	99	67.164	ENSDARG00000079947	gfi1b	57	67.164	Danio_rerio
ENSNBRG00000012376	-	99	65.185	ENSGMOG00000019123	gfi1b	51	65.185	Gadus_morhua
ENSNBRG00000012376	-	99	66.418	ENSGAFG00000003059	gfi1b	71	66.418	Gambusia_affinis
ENSNBRG00000012376	-	100	67.407	ENSHBUG00000005451	gfi1b	52	67.407	Haplochromis_burtoni
ENSNBRG00000012376	-	99	62.687	ENSLAFG00000022367	GFI1B	51	54.478	Loxodonta_africana
ENSNBRG00000012376	-	100	66.667	ENSMZEG00005015594	gfi1b	52	66.667	Maylandia_zebra
ENSNBRG00000012376	-	99	67.164	ENSMMOG00000011764	gfi1b	55	67.164	Mola_mola
ENSNBRG00000012376	-	99	51.497	ENSMODG00000012600	GFI1B	56	51.497	Monodelphis_domestica
ENSNBRG00000012376	-	99	61.940	ENSNGAG00000003333	Gfi1b	56	49.701	Nannospalax_galili
ENSNBRG00000012376	-	100	87.407	ENSONIG00000013011	gfi1b	89	87.407	Oreochromis_niloticus
ENSNBRG00000012376	-	99	64.179	ENSOANG00000014723	GFI1B	55	64.179	Ornithorhynchus_anatinus
ENSNBRG00000012376	-	99	66.418	ENSORLG00020003719	GFI1B	54	66.418	Oryzias_latipes_hni
ENSNBRG00000012376	-	100	65.926	ENSORLG00015017142	gfi1b	52	65.926	Oryzias_latipes_hsok
ENSNBRG00000012376	-	99	66.418	ENSOMEG00000015149	GFI1B	52	66.418	Oryzias_melastigma
ENSNBRG00000012376	-	99	60.741	ENSOGAG00000008879	GFI1B	51	60.741	Otolemur_garnettii
ENSNBRG00000012376	-	99	50.898	ENSPCIG00000019724	GFI1B	56	50.898	Phascolarctos_cinereus
ENSNBRG00000012376	-	99	65.672	ENSPFOG00000003460	gfi1b	50	65.672	Poecilia_formosa
ENSNBRG00000012376	-	99	65.672	ENSPLAG00000021960	GFI1B	51	65.672	Poecilia_latipinna
ENSNBRG00000012376	-	99	65.672	ENSPMEG00000001556	GFI1B	51	65.672	Poecilia_mexicana
ENSNBRG00000012376	-	99	65.672	ENSPMEG00000019220	gfi1b	51	65.672	Poecilia_mexicana
ENSNBRG00000012376	-	99	66.418	ENSPREG00000021718	gfi1b	51	66.418	Poecilia_reticulata
ENSNBRG00000012376	-	100	67.407	ENSPNYG00000018422	gfi1b	53	67.407	Pundamilia_nyererei
ENSNBRG00000012376	-	99	43.452	ENSSHAG00000006462	GFI1B	56	43.452	Sarcophilus_harrisii
ENSNBRG00000012376	-	100	64.035	ENSTGUG00000005282	-	100	64.035	Taeniopygia_guttata
ENSNBRG00000012376	-	99	67.164	ENSTRUG00000004525	gfi1b	51	67.164	Takifugu_rubripes
ENSNBRG00000012376	-	99	67.164	ENSTNIG00000003834	gfi1b	51	67.164	Tetraodon_nigroviridis
ENSNBRG00000012376	-	99	65.672	ENSXETG00000006263	gfi1b	53	65.672	Xenopus_tropicalis
ENSNBRG00000012376	-	99	65.672	ENSXMAG00000027589	gfi1b	51	65.672	Xiphophorus_maculatus