EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000012391 (Gene tree)
Gene ID: 102794245
Gene Symbol: gfi1b
Alias: si:ch211-231o6.2
Full Name: zinc finger protein Gfi-1b-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 4053 bases
Position: chrJH422311.1:4852720-4856772
Accession: 102794245
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000016024	zf-C2H2	PF00096.26	3.5e-25	1	5
ENSNBRP00000016024	zf-C2H2	PF00096.26	3.5e-25	2	5
ENSNBRP00000016024	zf-C2H2	PF00096.26	3.5e-25	3	5
ENSNBRP00000016024	zf-C2H2	PF00096.26	3.5e-25	4	5
ENSNBRP00000016024	zf-C2H2	PF00096.26	3.5e-25	5	5
ENSNBRP00000016024	zf-met	PF12874.7	1.5e-07	1	2
ENSNBRP00000016024	zf-met	PF12874.7	1.5e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000016456	-	990	XM_006795643	ENSNBRP00000016024	329 (aa)	XP_006795706	UPI0003EBFEA8

Gene Model

Click here to download ENSNBRG00000012391's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000012391's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000012391	gfi1b	62	43.871	ENSNBRG00000001608	-	95	43.871
ENSNBRG00000012391	gfi1b	93	39.873	ENSNBRG00000021111	zbtb16b	59	39.873
ENSNBRG00000012391	gfi1b	53	37.267	ENSNBRG00000009128	-	57	37.267
ENSNBRG00000012391	gfi1b	52	40.854	ENSNBRG00000009815	-	83	40.854
ENSNBRG00000012391	gfi1b	65	43.103	ENSNBRG00000016666	-	96	43.103
ENSNBRG00000012391	gfi1b	60	38.728	ENSNBRG00000001761	-	57	38.728
ENSNBRG00000012391	gfi1b	94	45.578	ENSNBRG00000024066	-	91	45.578
ENSNBRG00000012391	gfi1b	56	39.759	ENSNBRG00000004381	-	74	43.333
ENSNBRG00000012391	gfi1b	52	42.857	ENSNBRG00000003000	-	82	41.606
ENSNBRG00000012391	gfi1b	57	40.690	ENSNBRG00000016550	-	85	41.176
ENSNBRG00000012391	gfi1b	57	50.388	ENSNBRG00000016234	-	56	45.625
ENSNBRG00000012391	gfi1b	51	43.750	ENSNBRG00000024354	-	94	43.750
ENSNBRG00000012391	gfi1b	51	38.750	ENSNBRG00000007276	-	61	38.750
ENSNBRG00000012391	gfi1b	53	39.779	ENSNBRG00000007602	-	82	44.172
ENSNBRG00000012391	gfi1b	71	41.875	ENSNBRG00000003250	-	89	41.875
ENSNBRG00000012391	gfi1b	96	46.715	ENSNBRG00000000523	-	88	46.715
ENSNBRG00000012391	gfi1b	75	43.976	ENSNBRG00000003124	-	88	49.398
ENSNBRG00000012391	gfi1b	71	45.455	ENSNBRG00000016282	-	93	45.714
ENSNBRG00000012391	gfi1b	68	41.520	ENSNBRG00000008123	-	86	41.520
ENSNBRG00000012391	gfi1b	53	46.250	ENSNBRG00000024020	-	56	46.250
ENSNBRG00000012391	gfi1b	69	40.123	ENSNBRG00000016582	-	89	40.123
ENSNBRG00000012391	gfi1b	58	43.046	ENSNBRG00000002542	-	86	43.046
ENSNBRG00000012391	gfi1b	73	44.526	ENSNBRG00000023956	-	68	44.526
ENSNBRG00000012391	gfi1b	58	40.506	ENSNBRG00000006757	-	81	38.554
ENSNBRG00000012391	gfi1b	53	47.771	ENSNBRG00000015652	-	84	47.771
ENSNBRG00000012391	gfi1b	53	35.000	ENSNBRG00000004976	prdm5	72	35.000
ENSNBRG00000012391	gfi1b	57	39.423	ENSNBRG00000008223	-	81	37.173
ENSNBRG00000012391	gfi1b	78	42.308	ENSNBRG00000000321	-	96	46.875
ENSNBRG00000012391	gfi1b	67	49.180	ENSNBRG00000002902	-	97	49.180
ENSNBRG00000012391	gfi1b	56	39.623	ENSNBRG00000000305	-	78	39.623
ENSNBRG00000012391	gfi1b	56	45.185	ENSNBRG00000024014	-	60	45.185
ENSNBRG00000012391	gfi1b	61	45.333	ENSNBRG00000024019	-	86	45.333
ENSNBRG00000012391	gfi1b	56	41.573	ENSNBRG00000016603	-	87	41.573
ENSNBRG00000012391	gfi1b	61	42.537	ENSNBRG00000021237	-	89	42.537
ENSNBRG00000012391	gfi1b	53	40.714	ENSNBRG00000005849	-	84	40.714
ENSNBRG00000012391	gfi1b	72	43.125	ENSNBRG00000016577	si:dkey-182i3.9	89	43.125
ENSNBRG00000012391	gfi1b	61	40.120	ENSNBRG00000001641	-	69	40.120
ENSNBRG00000012391	gfi1b	88	45.205	ENSNBRG00000009075	znf236	72	45.205
ENSNBRG00000012391	gfi1b	70	35.374	ENSNBRG00000000708	-	93	35.374
ENSNBRG00000012391	gfi1b	50	43.478	ENSNBRG00000013604	-	72	43.478
ENSNBRG00000012391	gfi1b	57	38.983	ENSNBRG00000005796	-	95	38.983
ENSNBRG00000012391	gfi1b	60	43.038	ENSNBRG00000004822	-	51	43.038
ENSNBRG00000012391	gfi1b	69	38.462	ENSNBRG00000024294	-	75	38.462
ENSNBRG00000012391	gfi1b	68	39.091	ENSNBRG00000024293	-	78	39.450
ENSNBRG00000012391	gfi1b	53	40.625	ENSNBRG00000004557	-	84	40.625
ENSNBRG00000012391	gfi1b	51	45.570	ENSNBRG00000010405	-	86	45.588
ENSNBRG00000012391	gfi1b	88	46.988	ENSNBRG00000014088	-	99	47.020
ENSNBRG00000012391	gfi1b	57	41.860	ENSNBRG00000021967	-	66	41.860
ENSNBRG00000012391	gfi1b	53	38.182	ENSNBRG00000009811	-	85	38.182
ENSNBRG00000012391	gfi1b	58	45.113	ENSNBRG00000024048	-	82	45.113
ENSNBRG00000012391	gfi1b	51	40.476	ENSNBRG00000010194	-	70	40.476
ENSNBRG00000012391	gfi1b	51	67.407	ENSNBRG00000012376	-	100	67.407
ENSNBRG00000012391	gfi1b	74	34.167	ENSNBRG00000005175	zbtb41	77	34.167
ENSNBRG00000012391	gfi1b	54	42.857	ENSNBRG00000015442	ZNF319	89	42.857
ENSNBRG00000012391	gfi1b	53	43.210	ENSNBRG00000024344	-	71	42.953
ENSNBRG00000012391	gfi1b	72	42.484	ENSNBRG00000015873	-	96	42.484
ENSNBRG00000012391	gfi1b	52	43.478	ENSNBRG00000024179	-	61	43.478
ENSNBRG00000012391	gfi1b	51	43.571	ENSNBRG00000022241	-	83	43.571
ENSNBRG00000012391	gfi1b	67	42.336	ENSNBRG00000024046	-	52	42.336
ENSNBRG00000012391	gfi1b	58	45.509	ENSNBRG00000023229	-	76	45.509
ENSNBRG00000012391	gfi1b	76	46.237	ENSNBRG00000013583	-	93	46.237
ENSNBRG00000012391	gfi1b	54	43.609	ENSNBRG00000008827	znf319b	91	43.609
ENSNBRG00000012391	gfi1b	50	77.477	ENSNBRG00000001834	-	87	77.477
ENSNBRG00000012391	gfi1b	50	44.242	ENSNBRG00000000492	-	54	44.242
ENSNBRG00000012391	gfi1b	85	43.709	ENSNBRG00000013501	-	89	43.709
ENSNBRG00000012391	gfi1b	81	43.590	ENSNBRG00000001163	-	97	43.590
ENSNBRG00000012391	gfi1b	68	40.625	ENSNBRG00000005823	-	83	40.625
ENSNBRG00000012391	gfi1b	68	48.101	ENSNBRG00000019770	-	86	47.222
ENSNBRG00000012391	gfi1b	53	45.714	ENSNBRG00000019481	-	91	43.636
ENSNBRG00000012391	gfi1b	51	40.426	ENSNBRG00000008106	-	92	40.426
ENSNBRG00000012391	gfi1b	51	43.885	ENSNBRG00000004792	-	53	43.885
ENSNBRG00000012391	gfi1b	50	40.741	ENSNBRG00000018718	zbtb47b	67	40.741
ENSNBRG00000012391	gfi1b	68	42.361	ENSNBRG00000004523	-	92	42.361
ENSNBRG00000012391	gfi1b	52	50.000	ENSNBRG00000006411	-	74	50.000
ENSNBRG00000012391	gfi1b	71	43.860	ENSNBRG00000024345	-	89	43.860
ENSNBRG00000012391	gfi1b	52	45.000	ENSNBRG00000016169	-	66	45.000
ENSNBRG00000012391	gfi1b	82	47.794	ENSNBRG00000000577	-	90	47.794
ENSNBRG00000012391	gfi1b	60	43.750	ENSNBRG00000023960	-	66	43.750
ENSNBRG00000012391	gfi1b	61	43.976	ENSNBRG00000024054	-	61	43.976
ENSNBRG00000012391	gfi1b	71	38.750	ENSNBRG00000002946	-	57	38.750
ENSNBRG00000012391	gfi1b	99	37.956	ENSNBRG00000011785	snai2	98	37.956
ENSNBRG00000012391	gfi1b	57	43.103	ENSNBRG00000004723	-	88	43.103
ENSNBRG00000012391	gfi1b	85	45.695	ENSNBRG00000000960	-	98	46.250
ENSNBRG00000012391	gfi1b	50	77.876	ENSNBRG00000010351	-	88	77.876
ENSNBRG00000012391	gfi1b	53	46.552	ENSNBRG00000009279	-	89	46.552
ENSNBRG00000012391	gfi1b	50	41.875	ENSNBRG00000007384	-	50	41.875
ENSNBRG00000012391	gfi1b	54	40.000	ENSNBRG00000020314	si:dkey-89b17.4	50	40.000
ENSNBRG00000012391	gfi1b	50	49.107	ENSNBRG00000006125	-	91	49.107
ENSNBRG00000012391	gfi1b	70	43.609	ENSNBRG00000016219	-	85	43.609
ENSNBRG00000012391	gfi1b	51	41.772	ENSNBRG00000005805	-	93	41.772
ENSNBRG00000012391	gfi1b	59	45.625	ENSNBRG00000024086	-	64	45.625
ENSNBRG00000012391	gfi1b	52	43.373	ENSNBRG00000010987	-	73	43.373
ENSNBRG00000012391	gfi1b	51	45.631	ENSNBRG00000007311	-	80	45.631
ENSNBRG00000012391	gfi1b	50	42.105	ENSNBRG00000019004	-	61	42.105
ENSNBRG00000012391	gfi1b	55	40.397	ENSNBRG00000021355	-	90	40.397
ENSNBRG00000012391	gfi1b	56	37.791	ENSNBRG00000016564	-	81	37.791

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000012391	gfi1b	99	78.182	ENSAPOG00000001296	gfi1b	99	78.182	Acanthochromis_polyacanthus
ENSNBRG00000012391	gfi1b	100	78.116	ENSACIG00000002190	gfi1b	100	78.116	Amphilophus_citrinellus
ENSNBRG00000012391	gfi1b	99	77.576	ENSAOCG00000021187	gfi1b	99	77.576	Amphiprion_ocellaris
ENSNBRG00000012391	gfi1b	99	78.182	ENSAPEG00000016196	gfi1b	99	78.182	Amphiprion_percula
ENSNBRG00000012391	gfi1b	100	78.485	ENSATEG00000002534	gfi1b	100	78.485	Anabas_testudineus
ENSNBRG00000012391	gfi1b	100	58.261	ENSAPLG00000003373	GFI1B	100	58.261	Anas_platyrhynchos
ENSNBRG00000012391	gfi1b	100	97.568	ENSACLG00000027053	gfi1b	100	97.568	Astatotilapia_calliptera
ENSNBRG00000012391	gfi1b	100	67.456	ENSAMXG00000037544	GFI1B	100	67.456	Astyanax_mexicanus
ENSNBRG00000012391	gfi1b	100	56.250	ENSCAPG00000010404	GFI1B	100	56.250	Cavia_aperea
ENSNBRG00000012391	gfi1b	100	55.652	ENSCPBG00000021186	GFI1B	100	55.652	Chrysemys_picta_bellii
ENSNBRG00000012391	gfi1b	100	73.414	ENSCSEG00000001315	gfi1b	100	73.414	Cynoglossus_semilaevis
ENSNBRG00000012391	gfi1b	100	71.125	ENSCVAG00000017168	gfi1b	100	71.125	Cyprinodon_variegatus
ENSNBRG00000012391	gfi1b	100	67.647	ENSDARG00000079947	gfi1b	99	82.353	Danio_rerio
ENSNBRG00000012391	gfi1b	70	48.908	ENSEEUG00000012609	-	98	48.908	Erinaceus_europaeus
ENSNBRG00000012391	gfi1b	99	69.436	ENSELUG00000016933	gfi1b	99	69.436	Esox_lucius
ENSNBRG00000012391	gfi1b	100	53.476	ENSFALG00000001479	GFI1B	100	53.476	Ficedula_albicollis
ENSNBRG00000012391	gfi1b	100	75.076	ENSFHEG00000015138	gfi1b	100	75.076	Fundulus_heteroclitus
ENSNBRG00000012391	gfi1b	74	80.738	ENSGMOG00000019123	gfi1b	91	80.738	Gadus_morhua
ENSNBRG00000012391	gfi1b	100	56.695	ENSGALG00000003478	GFI1B	100	56.695	Gallus_gallus
ENSNBRG00000012391	gfi1b	71	88.936	ENSGAFG00000003059	gfi1b	100	88.936	Gambusia_affinis
ENSNBRG00000012391	gfi1b	99	70.822	ENSGACG00000018134	gfi1b	99	70.822	Gasterosteus_aculeatus
ENSNBRG00000012391	gfi1b	100	56.484	ENSGAGG00000021327	GFI1B	100	56.484	Gopherus_agassizii
ENSNBRG00000012391	gfi1b	100	97.568	ENSHBUG00000005451	gfi1b	100	97.568	Haplochromis_burtoni
ENSNBRG00000012391	gfi1b	99	71.646	ENSHCOG00000013713	gfi1b	99	71.646	Hippocampus_comes
ENSNBRG00000012391	gfi1b	100	69.851	ENSIPUG00000012769	gfi1b	100	69.851	Ictalurus_punctatus
ENSNBRG00000012391	gfi1b	99	50.663	ENSJJAG00000016355	Gfi1b	100	50.663	Jaculus_jaculus
ENSNBRG00000012391	gfi1b	100	72.508	ENSKMAG00000016047	gfi1b	100	72.508	Kryptolebias_marmoratus
ENSNBRG00000012391	gfi1b	99	75.227	ENSLBEG00000020297	gfi1b	99	75.831	Labrus_bergylta
ENSNBRG00000012391	gfi1b	99	59.403	ENSLACG00000012207	GFI1B	99	59.403	Latimeria_chalumnae
ENSNBRG00000012391	gfi1b	99	64.985	ENSLOCG00000005750	gfi1b	99	64.985	Lepisosteus_oculatus
ENSNBRG00000012391	gfi1b	100	54.913	ENSLAFG00000022367	GFI1B	100	54.913	Loxodonta_africana
ENSNBRG00000012391	gfi1b	100	79.027	ENSMAMG00000003040	gfi1b	100	79.027	Mastacembelus_armatus
ENSNBRG00000012391	gfi1b	100	96.960	ENSMZEG00005015594	gfi1b	100	96.960	Maylandia_zebra
ENSNBRG00000012391	gfi1b	100	56.410	ENSMGAG00000006129	GFI1B	100	56.410	Meleagris_gallopavo
ENSNBRG00000012391	gfi1b	99	77.204	ENSMMOG00000011764	gfi1b	99	77.204	Mola_mola
ENSNBRG00000012391	gfi1b	99	51.070	ENSMODG00000012600	GFI1B	99	51.070	Monodelphis_domestica
ENSNBRG00000012391	gfi1b	99	77.439	ENSMALG00000004034	gfi1b	99	77.439	Monopterus_albus
ENSNBRG00000012391	gfi1b	99	58.383	ENSNGAG00000003333	Gfi1b	100	58.383	Nannospalax_galili
ENSNBRG00000012391	gfi1b	100	98.176	ENSONIG00000013011	gfi1b	100	98.176	Oreochromis_niloticus
ENSNBRG00000012391	gfi1b	100	57.478	ENSOANG00000014723	GFI1B	100	57.478	Ornithorhynchus_anatinus
ENSNBRG00000012391	gfi1b	100	55.319	ENSORLG00000014390	GFI1B	96	64.260	Oryzias_latipes
ENSNBRG00000012391	gfi1b	100	70.213	ENSORLG00020003719	GFI1B	100	70.213	Oryzias_latipes_hni
ENSNBRG00000012391	gfi1b	100	69.605	ENSORLG00015017142	gfi1b	100	69.605	Oryzias_latipes_hsok
ENSNBRG00000012391	gfi1b	100	70.213	ENSOMEG00000015149	GFI1B	100	70.821	Oryzias_melastigma
ENSNBRG00000012391	gfi1b	100	57.101	ENSOGAG00000008879	GFI1B	100	57.396	Otolemur_garnettii
ENSNBRG00000012391	gfi1b	100	67.062	ENSPKIG00000007643	gfi1b	100	67.062	Paramormyrops_kingsleyae
ENSNBRG00000012391	gfi1b	100	54.958	ENSPSIG00000012112	GFI1B	100	54.958	Pelodiscus_sinensis
ENSNBRG00000012391	gfi1b	72	78.776	ENSPMGG00000006021	gfi1b	78	80.000	Periophthalmus_magnuspinnatus
ENSNBRG00000012391	gfi1b	99	49.202	ENSPCIG00000019724	GFI1B	99	49.202	Phascolarctos_cinereus
ENSNBRG00000012391	gfi1b	100	75.595	ENSPFOG00000003460	gfi1b	100	75.595	Poecilia_formosa
ENSNBRG00000012391	gfi1b	99	74.631	ENSPLAG00000017181	GFI1B	99	74.631	Poecilia_latipinna
ENSNBRG00000012391	gfi1b	100	76.970	ENSPLAG00000021960	GFI1B	100	76.970	Poecilia_latipinna
ENSNBRG00000012391	gfi1b	100	76.970	ENSPMEG00000019220	gfi1b	100	76.970	Poecilia_mexicana
ENSNBRG00000012391	gfi1b	100	76.970	ENSPMEG00000001556	GFI1B	100	76.970	Poecilia_mexicana
ENSNBRG00000012391	gfi1b	100	76.061	ENSPREG00000021718	gfi1b	100	76.061	Poecilia_reticulata
ENSNBRG00000012391	gfi1b	100	92.401	ENSPNYG00000018422	gfi1b	100	92.401	Pundamilia_nyererei
ENSNBRG00000012391	gfi1b	100	68.843	ENSPNAG00000021118	gfi1b	100	68.843	Pygocentrus_nattereri
ENSNBRG00000012391	gfi1b	99	46.133	ENSSHAG00000006462	GFI1B	99	46.133	Sarcophilus_harrisii
ENSNBRG00000012391	gfi1b	83	61.566	ENSSFOG00015011566	gfi1b	90	61.566	Scleropages_formosus
ENSNBRG00000012391	gfi1b	99	74.695	ENSSMAG00000015181	gfi1b	99	74.390	Scophthalmus_maximus
ENSNBRG00000012391	gfi1b	100	79.331	ENSSDUG00000011604	gfi1b	100	79.331	Seriola_dumerili
ENSNBRG00000012391	gfi1b	100	78.723	ENSSLDG00000013823	gfi1b	100	78.723	Seriola_lalandi_dorsalis
ENSNBRG00000012391	gfi1b	99	48.580	ENSSPUG00000016039	GFI1B	99	48.580	Sphenodon_punctatus
ENSNBRG00000012391	gfi1b	100	76.900	ENSSPAG00000022914	gfi1b	100	76.900	Stegastes_partitus
ENSNBRG00000012391	gfi1b	50	90.351	ENSTGUG00000005282	-	99	90.351	Taeniopygia_guttata
ENSNBRG00000012391	gfi1b	99	74.390	ENSTRUG00000004525	gfi1b	99	74.390	Takifugu_rubripes
ENSNBRG00000012391	gfi1b	99	72.948	ENSTNIG00000003834	gfi1b	99	72.948	Tetraodon_nigroviridis
ENSNBRG00000012391	gfi1b	100	42.857	ENSTBEG00000014459	GFI1B	100	42.857	Tupaia_belangeri
ENSNBRG00000012391	gfi1b	99	56.647	ENSXETG00000006263	gfi1b	99	57.391	Xenopus_tropicalis
ENSNBRG00000012391	gfi1b	100	76.667	ENSXMAG00000027589	gfi1b	100	76.667	Xiphophorus_maculatus