EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000012423 (Gene tree)
Gene ID: -
Gene Symbol: rabl3
Alias: fb40b02|wu:fb40b02|zgc:100876
Full Name: rab-like protein 3-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 4033 bases
Position: chrJH422302.1:1145060-1149092
Accession: 102779363
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000016069	MMR_HSR1	PF01926.23	8.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000016501	-	1707	XM_006793640	ENSNBRP00000016069	235 (aa)	XP_006793703	-

Gene Model

Click here to download ENSNBRG00000012423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000012423's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000012423	rabl3	51	32.231	ENSNBRG00000005082	RAB39B	53	32.231
ENSNBRG00000012423	rabl3	51	31.405	ENSNBRG00000018106	-	53	31.405

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000012423	rabl3	92	87.963	ENSG00000144840	RABL3	100	93.023	Homo_sapiens
ENSNBRG00000012423	rabl3	94	97.738	ENSAPOG00000024479	rabl3	98	97.738	Acanthochromis_polyacanthus
ENSNBRG00000012423	rabl3	92	88.889	ENSAMEG00000004809	RABL3	92	88.889	Ailuropoda_melanoleuca
ENSNBRG00000012423	rabl3	86	98.515	ENSACIG00000014343	rabl3	89	98.515	Amphilophus_citrinellus
ENSNBRG00000012423	rabl3	92	97.706	ENSAOCG00000011851	rabl3	93	97.706	Amphiprion_ocellaris
ENSNBRG00000012423	rabl3	92	97.706	ENSAPEG00000011214	rabl3	93	97.706	Amphiprion_percula
ENSNBRG00000012423	rabl3	94	96.364	ENSATEG00000003503	rabl3	95	99.010	Anabas_testudineus
ENSNBRG00000012423	rabl3	92	84.722	ENSACAG00000011313	-	92	84.722	Anolis_carolinensis
ENSNBRG00000012423	rabl3	92	90.278	ENSANAG00000027278	RABL3	92	90.278	Aotus_nancymaae
ENSNBRG00000012423	rabl3	92	98.157	ENSACLG00000009820	rabl3	93	98.157	Astatotilapia_calliptera
ENSNBRG00000012423	rabl3	92	94.009	ENSAMXG00000038716	rabl3	93	94.009	Astyanax_mexicanus
ENSNBRG00000012423	rabl3	92	90.741	ENSBTAG00000015898	RABL3	92	90.741	Bos_taurus
ENSNBRG00000012423	rabl3	92	90.278	ENSCJAG00000008611	RABL3	92	90.278	Callithrix_jacchus
ENSNBRG00000012423	rabl3	92	89.815	ENSCAFG00000011292	RABL3	82	89.815	Canis_familiaris
ENSNBRG00000012423	rabl3	92	89.815	ENSCAFG00020006397	RABL3	92	89.815	Canis_lupus_dingo
ENSNBRG00000012423	rabl3	92	90.741	ENSCHIG00000017365	RABL3	92	90.741	Capra_hircus
ENSNBRG00000012423	rabl3	92	88.426	ENSCPOG00000009645	RABL3	92	88.426	Cavia_porcellus
ENSNBRG00000012423	rabl3	92	88.426	ENSCATG00000032561	RABL3	92	88.426	Cercocebus_atys
ENSNBRG00000012423	rabl3	92	88.426	ENSCLAG00000010855	RABL3	92	88.426	Chinchilla_lanigera
ENSNBRG00000012423	rabl3	91	88.263	ENSCSAG00000007155	RABL3	91	88.263	Chlorocebus_sabaeus
ENSNBRG00000012423	rabl3	92	88.889	ENSCPBG00000001999	RABL3	92	88.889	Chrysemys_picta_bellii
ENSNBRG00000012423	rabl3	92	88.426	ENSCANG00000031684	RABL3	92	88.426	Colobus_angolensis_palliatus
ENSNBRG00000012423	rabl3	92	86.574	ENSCGRG00001021537	Rabl3	92	86.574	Cricetulus_griseus_chok1gshd
ENSNBRG00000012423	rabl3	92	86.574	ENSCGRG00000002114	Rabl3	92	86.574	Cricetulus_griseus_crigri
ENSNBRG00000012423	rabl3	76	95.506	ENSCSEG00000014982	rabl3	85	95.506	Cynoglossus_semilaevis
ENSNBRG00000012423	rabl3	76	97.191	ENSCVAG00000009904	rabl3	91	97.191	Cyprinodon_variegatus
ENSNBRG00000012423	rabl3	92	95.370	ENSDARG00000040959	rabl3	93	96.094	Danio_rerio
ENSNBRG00000012423	rabl3	92	88.889	ENSDNOG00000008174	RABL3	92	88.889	Dasypus_novemcinctus
ENSNBRG00000012423	rabl3	92	88.426	ENSETEG00000010206	RABL3	91	88.426	Echinops_telfairi
ENSNBRG00000012423	rabl3	92	90.278	ENSECAG00000023059	RABL3	92	90.278	Equus_caballus
ENSNBRG00000012423	rabl3	92	83.796	ENSEEUG00000002897	RABL3	91	83.796	Erinaceus_europaeus
ENSNBRG00000012423	rabl3	92	94.009	ENSELUG00000014758	rabl3	93	94.009	Esox_lucius
ENSNBRG00000012423	rabl3	92	89.815	ENSFCAG00000031879	RABL3	82	89.815	Felis_catus
ENSNBRG00000012423	rabl3	92	87.037	ENSFALG00000005296	RABL3	92	87.037	Ficedula_albicollis
ENSNBRG00000012423	rabl3	92	88.426	ENSFDAG00000000307	RABL3	92	88.426	Fukomys_damarensis
ENSNBRG00000012423	rabl3	92	94.907	ENSFHEG00000011273	rabl3	93	94.907	Fundulus_heteroclitus
ENSNBRG00000012423	rabl3	92	94.009	ENSGMOG00000007845	rabl3	93	94.009	Gadus_morhua
ENSNBRG00000012423	rabl3	92	88.426	ENSGALG00000014949	RABL3	92	88.426	Gallus_gallus
ENSNBRG00000012423	rabl3	92	94.009	ENSGAFG00000015953	rabl3	93	94.009	Gambusia_affinis
ENSNBRG00000012423	rabl3	91	95.327	ENSGACG00000007387	rabl3	100	95.349	Gasterosteus_aculeatus
ENSNBRG00000012423	rabl3	92	89.352	ENSGAGG00000003677	RABL3	92	89.352	Gopherus_agassizii
ENSNBRG00000012423	rabl3	92	87.963	ENSGGOG00000006059	RABL3	92	87.963	Gorilla_gorilla
ENSNBRG00000012423	rabl3	100	97.021	ENSHBUG00000019478	rabl3	93	97.021	Haplochromis_burtoni
ENSNBRG00000012423	rabl3	92	88.426	ENSHGLG00000014491	RABL3	92	88.426	Heterocephalus_glaber_female
ENSNBRG00000012423	rabl3	92	88.426	ENSHGLG00100004866	RABL3	92	88.426	Heterocephalus_glaber_male
ENSNBRG00000012423	rabl3	76	98.876	ENSHCOG00000019245	rabl3	91	98.876	Hippocampus_comes
ENSNBRG00000012423	rabl3	94	91.403	ENSIPUG00000012657	rabl3	96	91.403	Ictalurus_punctatus
ENSNBRG00000012423	rabl3	92	88.018	ENSSTOG00000019452	RABL3	92	88.018	Ictidomys_tridecemlineatus
ENSNBRG00000012423	rabl3	92	78.241	ENSJJAG00000023553	Rabl3	91	78.241	Jaculus_jaculus
ENSNBRG00000012423	rabl3	92	90.323	ENSKMAG00000015464	rabl3	93	90.323	Kryptolebias_marmoratus
ENSNBRG00000012423	rabl3	92	96.330	ENSLBEG00000010627	-	93	96.330	Labrus_bergylta
ENSNBRG00000012423	rabl3	92	96.330	ENSLBEG00000020595	rabl3	93	96.330	Labrus_bergylta
ENSNBRG00000012423	rabl3	94	90.909	ENSLOCG00000006265	rabl3	93	90.909	Lepisosteus_oculatus
ENSNBRG00000012423	rabl3	92	88.479	ENSLAFG00000003711	RABL3	92	88.479	Loxodonta_africana
ENSNBRG00000012423	rabl3	92	88.426	ENSMFAG00000031923	RABL3	92	88.426	Macaca_fascicularis
ENSNBRG00000012423	rabl3	92	77.778	ENSMMUG00000001594	RABL3	91	77.778	Macaca_mulatta
ENSNBRG00000012423	rabl3	92	88.426	ENSMNEG00000043980	RABL3	92	88.426	Macaca_nemestrina
ENSNBRG00000012423	rabl3	92	88.426	ENSMLEG00000028177	RABL3	92	88.426	Mandrillus_leucophaeus
ENSNBRG00000012423	rabl3	92	97.235	ENSMAMG00000015155	rabl3	93	97.235	Mastacembelus_armatus
ENSNBRG00000012423	rabl3	92	98.157	ENSMZEG00005002607	rabl3	93	98.157	Maylandia_zebra
ENSNBRG00000012423	rabl3	92	86.574	ENSMAUG00000013022	Rabl3	92	86.574	Mesocricetus_auratus
ENSNBRG00000012423	rabl3	92	89.352	ENSMICG00000049288	RABL3	92	89.352	Microcebus_murinus
ENSNBRG00000012423	rabl3	92	86.111	ENSMOCG00000015237	Rabl3	92	86.111	Microtus_ochrogaster
ENSNBRG00000012423	rabl3	86	97.537	ENSMMOG00000005628	rabl3	89	97.537	Mola_mola
ENSNBRG00000012423	rabl3	92	89.815	ENSMODG00000018232	RABL3	92	89.815	Monodelphis_domestica
ENSNBRG00000012423	rabl3	86	96.552	ENSMALG00000018837	rabl3	86	96.552	Monopterus_albus
ENSNBRG00000012423	rabl3	92	87.037	MGP_CAROLIEiJ_G0020728	Rabl3	100	92.248	Mus_caroli
ENSNBRG00000012423	rabl3	92	87.037	ENSMUSG00000022827	Rabl3	100	92.248	Mus_musculus
ENSNBRG00000012423	rabl3	94	85.909	MGP_PahariEiJ_G0016429	Rabl3	100	92.248	Mus_pahari
ENSNBRG00000012423	rabl3	92	87.037	MGP_SPRETEiJ_G0021628	Rabl3	100	92.248	Mus_spretus
ENSNBRG00000012423	rabl3	92	89.815	ENSMPUG00000008257	RABL3	82	89.815	Mustela_putorius_furo
ENSNBRG00000012423	rabl3	91	89.767	ENSMLUG00000014113	RABL3	91	89.767	Myotis_lucifugus
ENSNBRG00000012423	rabl3	92	78.241	ENSNGAG00000001939	Rabl3	92	78.241	Nannospalax_galili
ENSNBRG00000012423	rabl3	92	88.426	ENSNLEG00000031723	RABL3	92	88.426	Nomascus_leucogenys
ENSNBRG00000012423	rabl3	92	88.426	ENSMEUG00000006606	RABL3	92	88.426	Notamacropus_eugenii
ENSNBRG00000012423	rabl3	92	88.426	ENSODEG00000004758	-	92	88.426	Octodon_degus
ENSNBRG00000012423	rabl3	92	99.078	ENSONIG00000004281	rabl3	93	99.078	Oreochromis_niloticus
ENSNBRG00000012423	rabl3	91	87.850	ENSOANG00000003928	RABL3	91	87.850	Ornithorhynchus_anatinus
ENSNBRG00000012423	rabl3	95	94.643	ENSORLG00000020457	rabl3	94	94.545	Oryzias_latipes
ENSNBRG00000012423	rabl3	94	94.545	ENSORLG00020008991	rabl3	91	97.044	Oryzias_latipes_hni
ENSNBRG00000012423	rabl3	94	94.545	ENSORLG00015005649	rabl3	83	94.545	Oryzias_latipes_hsok
ENSNBRG00000012423	rabl3	94	95.909	ENSOMEG00000015066	rabl3	94	95.909	Oryzias_melastigma
ENSNBRG00000012423	rabl3	92	88.889	ENSOGAG00000005961	RABL3	92	88.889	Otolemur_garnettii
ENSNBRG00000012423	rabl3	92	90.741	ENSOARG00000019939	RABL3	92	90.741	Ovis_aries
ENSNBRG00000012423	rabl3	86	86.634	ENSPPAG00000036997	RABL3	79	86.634	Pan_paniscus
ENSNBRG00000012423	rabl3	92	89.815	ENSPPRG00000016325	RABL3	92	89.815	Panthera_pardus
ENSNBRG00000012423	rabl3	92	89.815	ENSPTIG00000018021	RABL3	92	89.815	Panthera_tigris_altaica
ENSNBRG00000012423	rabl3	92	87.963	ENSPTRG00000015272	RABL3	92	87.963	Pan_troglodytes
ENSNBRG00000012423	rabl3	92	88.426	ENSPANG00000001339	RABL3	92	88.426	Papio_anubis
ENSNBRG00000012423	rabl3	92	93.548	ENSPKIG00000007818	rabl3	93	93.548	Paramormyrops_kingsleyae
ENSNBRG00000012423	rabl3	92	88.426	ENSPSIG00000011358	RABL3	92	88.426	Pelodiscus_sinensis
ENSNBRG00000012423	rabl3	86	96.552	ENSPMGG00000015794	rabl3	92	96.552	Periophthalmus_magnuspinnatus
ENSNBRG00000012423	rabl3	92	86.574	ENSPEMG00000016913	Rabl3	92	86.574	Peromyscus_maniculatus_bairdii
ENSNBRG00000012423	rabl3	92	88.426	ENSPCIG00000018922	RABL3	92	88.426	Phascolarctos_cinereus
ENSNBRG00000012423	rabl3	92	94.931	ENSPFOG00000008586	rabl3	93	94.931	Poecilia_formosa
ENSNBRG00000012423	rabl3	92	94.931	ENSPLAG00000014482	rabl3	93	94.931	Poecilia_latipinna
ENSNBRG00000012423	rabl3	92	94.931	ENSPMEG00000002295	rabl3	93	94.931	Poecilia_mexicana
ENSNBRG00000012423	rabl3	92	94.470	ENSPREG00000014815	rabl3	93	94.470	Poecilia_reticulata
ENSNBRG00000012423	rabl3	92	88.426	ENSPPYG00000013501	RABL3	92	88.426	Pongo_abelii
ENSNBRG00000012423	rabl3	92	89.815	ENSPCOG00000022230	RABL3	92	89.815	Propithecus_coquereli
ENSNBRG00000012423	rabl3	92	87.963	ENSPVAG00000010013	RABL3	92	87.963	Pteropus_vampyrus
ENSNBRG00000012423	rabl3	92	98.618	ENSPNYG00000006659	rabl3	93	98.618	Pundamilia_nyererei
ENSNBRG00000012423	rabl3	92	95.392	ENSPNAG00000000748	rabl3	93	95.392	Pygocentrus_nattereri
ENSNBRG00000012423	rabl3	92	86.574	ENSRNOG00000026085	Rabl3	92	86.574	Rattus_norvegicus
ENSNBRG00000012423	rabl3	92	88.426	ENSRBIG00000040941	RABL3	92	88.426	Rhinopithecus_bieti
ENSNBRG00000012423	rabl3	92	88.426	ENSRROG00000043745	RABL3	92	88.426	Rhinopithecus_roxellana
ENSNBRG00000012423	rabl3	92	90.278	ENSSBOG00000004022	RABL3	92	90.278	Saimiri_boliviensis_boliviensis
ENSNBRG00000012423	rabl3	92	88.426	ENSSHAG00000012233	RABL3	92	88.426	Sarcophilus_harrisii
ENSNBRG00000012423	rabl3	92	93.548	ENSSFOG00015010171	rabl3	93	93.548	Scleropages_formosus
ENSNBRG00000012423	rabl3	92	95.872	ENSSMAG00000002403	rabl3	93	95.872	Scophthalmus_maximus
ENSNBRG00000012423	rabl3	92	97.696	ENSSDUG00000012078	rabl3	93	97.696	Seriola_dumerili
ENSNBRG00000012423	rabl3	92	98.157	ENSSLDG00000021899	rabl3	93	98.157	Seriola_lalandi_dorsalis
ENSNBRG00000012423	rabl3	92	89.352	ENSSARG00000008316	RABL3	92	89.352	Sorex_araneus
ENSNBRG00000012423	rabl3	94	88.182	ENSSPUG00000017490	RABL3	93	88.182	Sphenodon_punctatus
ENSNBRG00000012423	rabl3	93	98.624	ENSSPAG00000011642	rabl3	93	98.157	Stegastes_partitus
ENSNBRG00000012423	rabl3	92	90.278	ENSSSCG00000035258	RABL3	92	90.278	Sus_scrofa
ENSNBRG00000012423	rabl3	92	87.500	ENSTGUG00000013374	RABL3	92	87.500	Taeniopygia_guttata
ENSNBRG00000012423	rabl3	77	96.133	ENSTRUG00000007846	RABL3	100	97.656	Takifugu_rubripes
ENSNBRG00000012423	rabl3	92	75.463	ENSTBEG00000005153	RABL3	92	75.463	Tupaia_belangeri
ENSNBRG00000012423	rabl3	92	88.889	ENSUAMG00000005299	RABL3	92	88.889	Ursus_americanus
ENSNBRG00000012423	rabl3	92	88.426	ENSUMAG00000025256	RABL3	82	88.426	Ursus_maritimus
ENSNBRG00000012423	rabl3	92	90.278	ENSVPAG00000003776	RABL3	92	90.278	Vicugna_pacos
ENSNBRG00000012423	rabl3	92	89.815	ENSVVUG00000022300	RABL3	82	89.815	Vulpes_vulpes
ENSNBRG00000012423	rabl3	92	94.931	ENSXMAG00000003244	rabl3	93	94.931	Xiphophorus_maculatus