EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000012485 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA-binding E3 ubiquitin-protein ligase MEX3C-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 9862 bases
Position: chrJH422289.1:2192682-2202543
Accession: 102782129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000016161	KH_1	PF00013.29	5e-26	1	2
ENSNBRP00000016161	KH_1	PF00013.29	5e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000016596	-	1524	XM_006789760	ENSNBRP00000016161	507 (aa)	XP_006789823	-

Gene Model

Click here to download ENSNBRG00000012485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000012485's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000012485	-	88	49.049	ENSNBRG00000020089	MEX3D	85	51.168
ENSNBRG00000012485	-	86	50.000	ENSNBRG00000000526	mex3b	89	49.304
ENSNBRG00000012485	-	86	47.403	ENSNBRG00000005141	-	78	46.537

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000012485	-	65	84.772	ENSG00000183496	MEX3B	56	71.269	Homo_sapiens
ENSNBRG00000012485	-	98	76.199	ENSAPOG00000024248	-	82	76.199	Acanthochromis_polyacanthus
ENSNBRG00000012485	-	86	54.565	ENSAPOG00000006457	mex3b	97	53.261	Acanthochromis_polyacanthus
ENSNBRG00000012485	-	95	88.750	ENSACIG00000005655	-	91	88.750	Amphilophus_citrinellus
ENSNBRG00000012485	-	86	55.457	ENSACIG00000017783	mex3b	89	52.784	Amphilophus_citrinellus
ENSNBRG00000012485	-	98	75.844	ENSAOCG00000021347	-	81	75.844	Amphiprion_ocellaris
ENSNBRG00000012485	-	94	51.107	ENSAOCG00000023903	mex3b	92	50.704	Amphiprion_ocellaris
ENSNBRG00000012485	-	94	52.113	ENSAPEG00000000263	mex3b	92	51.107	Amphiprion_percula
ENSNBRG00000012485	-	98	75.666	ENSAPEG00000003579	-	81	75.666	Amphiprion_percula
ENSNBRG00000012485	-	86	50.491	ENSATEG00000012352	mex3b	91	49.206	Anabas_testudineus
ENSNBRG00000012485	-	98	71.250	ENSATEG00000015187	-	100	74.550	Anabas_testudineus
ENSNBRG00000012485	-	85	48.312	ENSACAG00000011072	MEX3B	99	50.000	Anolis_carolinensis
ENSNBRG00000012485	-	65	84.772	ENSANAG00000027164	MEX3B	55	71.269	Aotus_nancymaae
ENSNBRG00000012485	-	98	87.184	ENSACLG00000017634	-	83	87.184	Astatotilapia_calliptera
ENSNBRG00000012485	-	86	50.098	ENSACLG00000025776	mex3b	91	49.105	Astatotilapia_calliptera
ENSNBRG00000012485	-	86	51.308	ENSAMXG00000033615	mex3b	90	50.302	Astyanax_mexicanus
ENSNBRG00000012485	-	50	84.772	ENSBTAG00000052904	MEX3B	54	72.388	Bos_taurus
ENSNBRG00000012485	-	65	80.288	ENSCJAG00000008043	MEX3B	56	68.459	Callithrix_jacchus
ENSNBRG00000012485	-	50	84.772	ENSCAFG00000013759	MEX3B	56	71.269	Canis_familiaris
ENSNBRG00000012485	-	50	84.772	ENSCAFG00020015832	MEX3B	54	71.269	Canis_lupus_dingo
ENSNBRG00000012485	-	50	84.772	ENSCHIG00000019863	MEX3B	54	72.388	Capra_hircus
ENSNBRG00000012485	-	61	84.118	ENSTSYG00000025636	MEX3B	55	69.295	Carlito_syrichta
ENSNBRG00000012485	-	65	75.909	ENSCCAG00000001259	MEX3B	57	65.636	Cebus_capucinus
ENSNBRG00000012485	-	65	84.772	ENSCATG00000030784	MEX3B	56	71.269	Cercocebus_atys
ENSNBRG00000012485	-	65	84.264	ENSCLAG00000009451	MEX3B	74	69.455	Chinchilla_lanigera
ENSNBRG00000012485	-	65	84.772	ENSCSAG00000015153	MEX3B	56	71.269	Chlorocebus_sabaeus
ENSNBRG00000012485	-	79	67.883	ENSCPBG00000007809	MEX3B	89	50.391	Chrysemys_picta_bellii
ENSNBRG00000012485	-	65	84.772	ENSCANG00000034524	MEX3B	58	69.818	Colobus_angolensis_palliatus
ENSNBRG00000012485	-	65	84.772	ENSCGRG00001016198	Mex3b	55	71.269	Cricetulus_griseus_chok1gshd
ENSNBRG00000012485	-	61	84.118	ENSCGRG00000018461	Mex3b	60	69.295	Cricetulus_griseus_crigri
ENSNBRG00000012485	-	80	69.979	ENSCSEG00000006809	-	70	69.528	Cynoglossus_semilaevis
ENSNBRG00000012485	-	75	70.612	ENSCSEG00000005852	mex3b	70	69.796	Cynoglossus_semilaevis
ENSNBRG00000012485	-	98	65.294	ENSCSEG00000011533	-	99	66.403	Cynoglossus_semilaevis
ENSNBRG00000012485	-	100	70.979	ENSCVAG00000006043	-	83	70.979	Cyprinodon_variegatus
ENSNBRG00000012485	-	88	50.493	ENSDARG00000058369	mex3b	92	50.693	Danio_rerio
ENSNBRG00000012485	-	81	67.384	ENSDNOG00000043628	MEX3B	56	72.119	Dasypus_novemcinctus
ENSNBRG00000012485	-	75	70.428	ENSEBUG00000013015	mex3b	64	69.650	Eptatretus_burgeri
ENSNBRG00000012485	-	86	51.844	ENSEBUG00000007080	mex3b	88	51.931	Eptatretus_burgeri
ENSNBRG00000012485	-	86	55.556	ENSEASG00005007105	MEX3B	69	56.728	Equus_asinus_asinus
ENSNBRG00000012485	-	78	63.973	ENSECAG00000013497	MEX3B	57	65.517	Equus_caballus
ENSNBRG00000012485	-	86	53.097	ENSELUG00000002503	mex3b	89	53.392	Esox_lucius
ENSNBRG00000012485	-	50	84.772	ENSFCAG00000037513	MEX3B	55	71.269	Felis_catus
ENSNBRG00000012485	-	62	69.776	ENSFALG00000011102	MEX3B	54	71.103	Ficedula_albicollis
ENSNBRG00000012485	-	63	67.626	ENSFDAG00000018452	MEX3B	79	71.269	Fukomys_damarensis
ENSNBRG00000012485	-	97	77.823	ENSFHEG00000022740	-	99	76.248	Fundulus_heteroclitus
ENSNBRG00000012485	-	87	67.073	ENSGMOG00000005826	-	100	66.395	Gadus_morhua
ENSNBRG00000012485	-	79	70.037	ENSGALG00000032984	MEX3B	77	67.340	Gallus_gallus
ENSNBRG00000012485	-	90	70.286	ENSGAFG00000013694	-	80	68.952	Gambusia_affinis
ENSNBRG00000012485	-	87	71.094	ENSGACG00000007490	-	100	71.094	Gasterosteus_aculeatus
ENSNBRG00000012485	-	91	46.047	ENSGACG00000012530	mex3b	53	71.875	Gasterosteus_aculeatus
ENSNBRG00000012485	-	86	51.852	ENSGAGG00000022839	MEX3B	89	52.033	Gopherus_agassizii
ENSNBRG00000012485	-	65	84.772	ENSGGOG00000000597	MEX3B	56	71.269	Gorilla_gorilla
ENSNBRG00000012485	-	98	87.365	ENSHBUG00000010552	-	82	87.365	Haplochromis_burtoni
ENSNBRG00000012485	-	86	50.000	ENSHBUG00000022683	mex3b	91	49.304	Haplochromis_burtoni
ENSNBRG00000012485	-	65	84.264	ENSHGLG00000012504	MEX3B	55	70.896	Heterocephalus_glaber_female
ENSNBRG00000012485	-	65	84.264	ENSHGLG00100008208	MEX3B	73	70.896	Heterocephalus_glaber_male
ENSNBRG00000012485	-	94	50.101	ENSHCOG00000007290	mex3b	93	51.078	Hippocampus_comes
ENSNBRG00000012485	-	97	64.662	ENSHCOG00000010812	-	98	64.662	Hippocampus_comes
ENSNBRG00000012485	-	86	49.588	ENSIPUG00000023356	mex3b	90	49.692	Ictalurus_punctatus
ENSNBRG00000012485	-	65	84.772	ENSSTOG00000006738	MEX3B	65	72.388	Ictidomys_tridecemlineatus
ENSNBRG00000012485	-	65	84.772	ENSJJAG00000015411	Mex3b	55	71.269	Jaculus_jaculus
ENSNBRG00000012485	-	99	70.053	ENSKMAG00000021181	MEX3B	84	71.080	Kryptolebias_marmoratus
ENSNBRG00000012485	-	92	50.984	ENSLBEG00000015131	mex3b	99	49.802	Labrus_bergylta
ENSNBRG00000012485	-	73	69.690	ENSLBEG00000007607	-	68	69.690	Labrus_bergylta
ENSNBRG00000012485	-	86	50.888	ENSLOCG00000012858	mex3b	90	51.195	Lepisosteus_oculatus
ENSNBRG00000012485	-	78	66.667	ENSLAFG00000006027	MEX3B	95	84.343	Loxodonta_africana
ENSNBRG00000012485	-	65	84.772	ENSMFAG00000037608	MEX3B	55	71.269	Macaca_fascicularis
ENSNBRG00000012485	-	65	80.288	ENSMMUG00000018639	MEX3B	56	68.459	Macaca_mulatta
ENSNBRG00000012485	-	65	84.772	ENSMNEG00000043420	MEX3B	55	71.269	Macaca_nemestrina
ENSNBRG00000012485	-	65	84.772	ENSMLEG00000037832	MEX3B	58	71.269	Mandrillus_leucophaeus
ENSNBRG00000012485	-	97	82.584	ENSMAMG00000001370	-	80	79.586	Mastacembelus_armatus
ENSNBRG00000012485	-	86	50.787	ENSMAMG00000011325	mex3b	91	49.304	Mastacembelus_armatus
ENSNBRG00000012485	-	86	50.000	ENSMZEG00005003082	mex3b	91	49.304	Maylandia_zebra
ENSNBRG00000012485	-	98	87.184	ENSMZEG00005004908	-	83	87.184	Maylandia_zebra
ENSNBRG00000012485	-	50	84.772	ENSMAUG00000001211	Mex3b	55	71.269	Mesocricetus_auratus
ENSNBRG00000012485	-	50	84.264	ENSMICG00000043733	MEX3B	55	72.015	Microcebus_murinus
ENSNBRG00000012485	-	65	84.772	ENSMOCG00000019726	Mex3b	55	71.269	Microtus_ochrogaster
ENSNBRG00000012485	-	98	77.535	ENSMMOG00000000120	-	99	77.535	Mola_mola
ENSNBRG00000012485	-	83	48.361	ENSMMOG00000015373	mex3b	88	47.433	Mola_mola
ENSNBRG00000012485	-	64	84.264	ENSMODG00000019387	MEX3B	67	70.000	Monodelphis_domestica
ENSNBRG00000012485	-	79	70.213	ENSMALG00000009589	-	77	71.542	Monopterus_albus
ENSNBRG00000012485	-	65	84.772	MGP_CAROLIEiJ_G0029937	Mex3b	69	71.269	Mus_caroli
ENSNBRG00000012485	-	65	84.772	ENSMUSG00000057706	Mex3b	69	71.269	Mus_musculus
ENSNBRG00000012485	-	65	84.772	MGP_PahariEiJ_G0013158	Mex3b	69	71.269	Mus_pahari
ENSNBRG00000012485	-	65	84.772	MGP_SPRETEiJ_G0031039	Mex3b	69	70.896	Mus_spretus
ENSNBRG00000012485	-	50	84.772	ENSMPUG00000015493	MEX3B	56	71.269	Mustela_putorius_furo
ENSNBRG00000012485	-	50	84.772	ENSNGAG00000010102	Mex3b	55	71.269	Nannospalax_galili
ENSNBRG00000012485	-	65	77.778	ENSNLEG00000036285	MEX3B	55	66.171	Nomascus_leucogenys
ENSNBRG00000012485	-	50	81.250	ENSOPRG00000009604	MEX3B	63	66.897	Ochotona_princeps
ENSNBRG00000012485	-	50	84.264	ENSODEG00000015600	MEX3B	55	70.896	Octodon_degus
ENSNBRG00000012485	-	86	50.000	ENSONIG00000003391	mex3b	91	49.304	Oreochromis_niloticus
ENSNBRG00000012485	-	97	91.171	ENSONIG00000015037	-	100	91.171	Oreochromis_niloticus
ENSNBRG00000012485	-	86	48.713	ENSOCUG00000011603	MEX3B	91	49.802	Oryctolagus_cuniculus
ENSNBRG00000012485	-	100	71.777	ENSORLG00000004985	-	83	71.951	Oryzias_latipes
ENSNBRG00000012485	-	100	71.204	ENSORLG00020020174	-	83	71.902	Oryzias_latipes_hni
ENSNBRG00000012485	-	100	71.379	ENSORLG00015008649	-	83	72.077	Oryzias_latipes_hsok
ENSNBRG00000012485	-	97	73.118	ENSOMEG00000023339	-	81	74.373	Oryzias_melastigma
ENSNBRG00000012485	-	64	84.772	ENSOGAG00000029664	MEX3B	55	71.269	Otolemur_garnettii
ENSNBRG00000012485	-	65	84.772	ENSPPAG00000020407	MEX3B	56	71.269	Pan_paniscus
ENSNBRG00000012485	-	65	84.772	ENSPTRG00000007373	MEX3B	55	71.269	Pan_troglodytes
ENSNBRG00000012485	-	65	84.772	ENSPANG00000015634	MEX3B	56	71.269	Papio_anubis
ENSNBRG00000012485	-	78	69.925	ENSPKIG00000018385	mex3b	91	49.206	Paramormyrops_kingsleyae
ENSNBRG00000012485	-	92	50.515	ENSPKIG00000019969	-	99	51.546	Paramormyrops_kingsleyae
ENSNBRG00000012485	-	86	50.308	ENSPSIG00000007979	MEX3B	89	51.318	Pelodiscus_sinensis
ENSNBRG00000012485	-	86	51.688	ENSPMGG00000015808	mex3b	91	51.931	Periophthalmus_magnuspinnatus
ENSNBRG00000012485	-	97	67.681	ENSPMGG00000017559	-	95	67.355	Periophthalmus_magnuspinnatus
ENSNBRG00000012485	-	86	41.750	ENSPMAG00000000125	mex3b	99	42.424	Petromyzon_marinus
ENSNBRG00000012485	-	97	74.812	ENSPFOG00000018999	-	84	75.376	Poecilia_formosa
ENSNBRG00000012485	-	97	73.592	ENSPLAG00000002303	-	98	71.923	Poecilia_latipinna
ENSNBRG00000012485	-	97	73.346	ENSPMEG00000006448	-	98	73.735	Poecilia_mexicana
ENSNBRG00000012485	-	97	73.036	ENSPREG00000018559	-	81	71.429	Poecilia_reticulata
ENSNBRG00000012485	-	71	54.617	ENSPPYG00000006723	-	65	57.825	Pongo_abelii
ENSNBRG00000012485	-	61	84.118	ENSPCAG00000014150	MEX3B	78	68.952	Procavia_capensis
ENSNBRG00000012485	-	50	84.772	ENSPCOG00000019807	MEX3B	55	72.388	Propithecus_coquereli
ENSNBRG00000012485	-	50	84.772	ENSPVAG00000000093	MEX3B	56	71.269	Pteropus_vampyrus
ENSNBRG00000012485	-	86	50.000	ENSPNYG00000019384	mex3b	88	49.304	Pundamilia_nyererei
ENSNBRG00000012485	-	98	87.184	ENSPNYG00000010418	-	82	87.184	Pundamilia_nyererei
ENSNBRG00000012485	-	86	55.856	ENSPNAG00000002109	mex3b	93	54.730	Pygocentrus_nattereri
ENSNBRG00000012485	-	65	84.772	ENSRNOG00000025142	Mex3b	69	71.269	Rattus_norvegicus
ENSNBRG00000012485	-	65	84.772	ENSRBIG00000033099	MEX3B	56	71.269	Rhinopithecus_bieti
ENSNBRG00000012485	-	65	84.772	ENSRROG00000041868	MEX3B	56	71.269	Rhinopithecus_roxellana
ENSNBRG00000012485	-	86	54.084	ENSSFOG00015016308	mex3b	91	53.642	Scleropages_formosus
ENSNBRG00000012485	-	86	49.390	ENSSFOG00015016667	mex3b	87	50.000	Scleropages_formosus
ENSNBRG00000012485	-	86	50.000	ENSSMAG00000017078	mex3b	91	48.713	Scophthalmus_maximus
ENSNBRG00000012485	-	85	73.160	ENSSMAG00000001075	-	100	71.523	Scophthalmus_maximus
ENSNBRG00000012485	-	86	50.392	ENSSDUG00000013254	mex3b	91	49.109	Seriola_dumerili
ENSNBRG00000012485	-	97	76.122	ENSSDUG00000022255	-	98	80.716	Seriola_dumerili
ENSNBRG00000012485	-	99	75.000	ENSSLDG00000024917	-	82	75.350	Seriola_lalandi_dorsalis
ENSNBRG00000012485	-	86	50.392	ENSSLDG00000014620	mex3b	91	49.109	Seriola_lalandi_dorsalis
ENSNBRG00000012485	-	89	73.596	ENSSPAG00000002581	-	77	73.970	Stegastes_partitus
ENSNBRG00000012485	-	86	54.048	ENSSPAG00000011854	mex3b	90	53.611	Stegastes_partitus
ENSNBRG00000012485	-	65	84.772	ENSSSCG00000038491	MEX3B	55	71.269	Sus_scrofa
ENSNBRG00000012485	-	98	70.125	ENSTRUG00000011888	-	81	70.125	Takifugu_rubripes
ENSNBRG00000012485	-	86	51.368	ENSTRUG00000000367	mex3b	92	49.895	Takifugu_rubripes
ENSNBRG00000012485	-	86	52.954	ENSTNIG00000003398	mex3b	90	51.055	Tetraodon_nigroviridis
ENSNBRG00000012485	-	50	76.256	ENSUAMG00000019302	MEX3B	57	65.862	Ursus_americanus
ENSNBRG00000012485	-	52	81.043	ENSVVUG00000004955	MEX3B	55	68.858	Vulpes_vulpes
ENSNBRG00000012485	-	86	51.363	ENSXETG00000027601	mex3b	89	51.867	Xenopus_tropicalis
ENSNBRG00000012485	-	69	70.324	ENSXCOG00000005190	-	92	72.703	Xiphophorus_couchianus
ENSNBRG00000012485	-	97	73.703	ENSXMAG00000015283	-	81	72.093	Xiphophorus_maculatus