EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000012748 (Gene tree)
Gene ID: -
Gene Symbol: larp6b
Alias: im:7142825|wu:fa55b04|zgc:162969
Full Name: La ribonucleoprotein domain family%2C member 6b
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 3124 bases
Position: chrJH422296.1:3201229-3204352
Accession: ZDB-GENE-041008-244
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000016498	La	PF05383.17	1.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000016939	-	1194	-	ENSNBRP00000016498	397 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000012748's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000012748's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000012748	larp6b	87	30.673	ENSNBRG00000008120	larp6a	77	30.673

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000012748	larp6b	90	57.341	ENSAPOG00000003568	-	93	57.341	Acanthochromis_polyacanthus
ENSNBRG00000012748	larp6b	93	68.835	ENSACIG00000008349	-	84	68.835	Amphilophus_citrinellus
ENSNBRG00000012748	larp6b	90	60.606	ENSAOCG00000004646	larp6b	92	60.606	Amphiprion_ocellaris
ENSNBRG00000012748	larp6b	90	60.606	ENSAPEG00000022748	-	91	60.606	Amphiprion_percula
ENSNBRG00000012748	larp6b	93	59.249	ENSATEG00000021222	-	92	59.249	Anabas_testudineus
ENSNBRG00000012748	larp6b	96	95.312	ENSACLG00000009988	larp6b	96	95.833	Astatotilapia_calliptera
ENSNBRG00000012748	larp6b	52	48.182	ENSAMXG00000018956	larp6b	88	35.849	Astyanax_mexicanus
ENSNBRG00000012748	larp6b	95	47.258	ENSCVAG00000012145	-	94	47.258	Cyprinodon_variegatus
ENSNBRG00000012748	larp6b	89	35.529	ENSDARG00000003968	larp6b	88	35.529	Danio_rerio
ENSNBRG00000012748	larp6b	86	36.250	ENSELUG00000021677	larp6b	83	36.250	Esox_lucius
ENSNBRG00000012748	larp6b	93	51.604	ENSFHEG00000010409	-	83	51.604	Fundulus_heteroclitus
ENSNBRG00000012748	larp6b	92	52.304	ENSGAFG00000020138	-	89	52.304	Gambusia_affinis
ENSNBRG00000012748	larp6b	95	96.296	ENSHBUG00000012344	larp6b	93	96.296	Haplochromis_burtoni
ENSNBRG00000012748	larp6b	89	34.699	ENSIPUG00000007609	larp6b	88	34.541	Ictalurus_punctatus
ENSNBRG00000012748	larp6b	91	57.576	ENSLBEG00000016460	-	99	57.576	Labrus_bergylta
ENSNBRG00000012748	larp6b	94	60.847	ENSMAMG00000005509	-	93	60.847	Mastacembelus_armatus
ENSNBRG00000012748	larp6b	96	95.052	ENSMZEG00005024390	larp6b	96	95.573	Maylandia_zebra
ENSNBRG00000012748	larp6b	90	53.371	ENSPLAG00000005133	-	94	53.371	Poecilia_latipinna
ENSNBRG00000012748	larp6b	90	53.371	ENSPMEG00000019947	-	96	53.371	Poecilia_mexicana
ENSNBRG00000012748	larp6b	92	51.762	ENSPREG00000011853	-	87	51.762	Poecilia_reticulata
ENSNBRG00000012748	larp6b	90	94.475	ENSPNYG00000007025	larp6b	86	94.475	Pundamilia_nyererei
ENSNBRG00000012748	larp6b	87	35.872	ENSPNAG00000023854	larp6b	84	35.872	Pygocentrus_nattereri
ENSNBRG00000012748	larp6b	69	62.909	ENSSDUG00000009842	-	89	59.060	Seriola_dumerili
ENSNBRG00000012748	larp6b	88	61.254	ENSSLDG00000017081	-	80	61.254	Seriola_lalandi_dorsalis
ENSNBRG00000012748	larp6b	90	60.054	ENSSPAG00000014320	-	93	59.536	Stegastes_partitus
ENSNBRG00000012748	larp6b	92	52.162	ENSXCOG00000018917	-	93	52.162	Xiphophorus_couchianus
ENSNBRG00000012748	larp6b	92	52.162	ENSXMAG00000025734	-	94	52.162	Xiphophorus_maculatus