EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000012749 (Gene tree)
Gene ID: -
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 7275 bases
Position: chrJH422289.1:3028854-3036128
Accession: 102785204
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000016527	ResIII	PF04851.15	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000016968	-	2508	XM_006789772	ENSNBRP00000016527	835 (aa)	XP_006789835	-

Gene Model

Click here to download ENSNBRG00000012749's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000012749's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000012749	smarcad1a	54	37.395	ENSNBRG00000017998	SMARCA2	79	41.758
ENSNBRG00000012749	smarcad1a	59	31.931	ENSNBRG00000013394	rad54b	53	32.186
ENSNBRG00000012749	smarcad1a	62	33.880	ENSNBRG00000024242	hells	68	33.880

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000012749	smarcad1a	85	61.367	ENSG00000163104	SMARCAD1	97	67.358	Homo_sapiens
ENSNBRG00000012749	smarcad1a	97	82.086	ENSAPOG00000011446	smarcad1a	77	82.108	Acanthochromis_polyacanthus
ENSNBRG00000012749	smarcad1a	85	61.236	ENSAMEG00000005844	SMARCAD1	66	63.127	Ailuropoda_melanoleuca
ENSNBRG00000012749	smarcad1a	84	89.586	ENSACIG00000018326	smarcad1a	95	92.148	Amphilophus_citrinellus
ENSNBRG00000012749	smarcad1a	97	82.598	ENSAOCG00000019762	smarcad1a	77	81.863	Amphiprion_ocellaris
ENSNBRG00000012749	smarcad1a	98	82.339	ENSAPEG00000003889	smarcad1a	77	82.230	Amphiprion_percula
ENSNBRG00000012749	smarcad1a	96	81.134	ENSATEG00000015608	smarcad1a	80	82.432	Anabas_testudineus
ENSNBRG00000012749	smarcad1a	74	67.360	ENSAPLG00000004630	SMARCAD1	68	65.802	Anas_platyrhynchos
ENSNBRG00000012749	smarcad1a	74	66.240	ENSACAG00000013554	SMARCAD1	61	66.240	Anolis_carolinensis
ENSNBRG00000012749	smarcad1a	85	61.227	ENSANAG00000020488	SMARCAD1	75	63.127	Aotus_nancymaae
ENSNBRG00000012749	smarcad1a	97	95.808	ENSACLG00000017063	smarcad1a	76	95.808	Astatotilapia_calliptera
ENSNBRG00000012749	smarcad1a	86	68.188	ENSAMXG00000019130	smarcad1b	73	71.386	Astyanax_mexicanus
ENSNBRG00000012749	smarcad1a	82	68.006	ENSAMXG00000015470	smarcad1a	92	70.846	Astyanax_mexicanus
ENSNBRG00000012749	smarcad1a	85	60.924	ENSBTAG00000017061	SMARCAD1	66	62.794	Bos_taurus
ENSNBRG00000012749	smarcad1a	75	42.271	WBGene00010845	M03C11.8	67	41.518	Caenorhabditis_elegans
ENSNBRG00000012749	smarcad1a	85	61.367	ENSCJAG00000006778	SMARCAD1	66	63.274	Callithrix_jacchus
ENSNBRG00000012749	smarcad1a	85	61.236	ENSCAFG00000010026	SMARCAD1	66	63.127	Canis_familiaris
ENSNBRG00000012749	smarcad1a	85	61.236	ENSCAFG00020003994	SMARCAD1	76	63.127	Canis_lupus_dingo
ENSNBRG00000012749	smarcad1a	85	61.010	ENSCHIG00000012905	SMARCAD1	66	63.127	Capra_hircus
ENSNBRG00000012749	smarcad1a	85	61.376	ENSTSYG00000002706	SMARCAD1	66	63.274	Carlito_syrichta
ENSNBRG00000012749	smarcad1a	86	54.469	ENSCAPG00000016744	SMARCAD1	74	56.315	Cavia_aperea
ENSNBRG00000012749	smarcad1a	85	61.096	ENSCPOG00000011398	SMARCAD1	66	62.979	Cavia_porcellus
ENSNBRG00000012749	smarcad1a	85	61.367	ENSCCAG00000022264	SMARCAD1	97	67.358	Cebus_capucinus
ENSNBRG00000012749	smarcad1a	85	61.367	ENSCATG00000035663	SMARCAD1	76	63.274	Cercocebus_atys
ENSNBRG00000012749	smarcad1a	85	61.367	ENSCSAG00000004186	SMARCAD1	81	63.274	Chlorocebus_sabaeus
ENSNBRG00000012749	smarcad1a	89	60.160	ENSCPBG00000013203	SMARCAD1	66	63.464	Chrysemys_picta_bellii
ENSNBRG00000012749	smarcad1a	74	49.604	ENSCING00000001688	-	95	49.604	Ciona_intestinalis
ENSNBRG00000012749	smarcad1a	85	61.367	ENSCANG00000003556	SMARCAD1	97	67.358	Colobus_angolensis_palliatus
ENSNBRG00000012749	smarcad1a	85	60.306	ENSCGRG00001015056	Smarcad1	61	66.346	Cricetulus_griseus_chok1gshd
ENSNBRG00000012749	smarcad1a	85	60.306	ENSCGRG00000014087	Smarcad1	61	66.346	Cricetulus_griseus_crigri
ENSNBRG00000012749	smarcad1a	97	75.616	ENSCSEG00000017903	smarcad1a	74	76.306	Cynoglossus_semilaevis
ENSNBRG00000012749	smarcad1a	98	74.178	ENSCSEG00000014419	-	78	75.696	Cynoglossus_semilaevis
ENSNBRG00000012749	smarcad1a	76	75.237	ENSDARG00000073721	smarcad1b	71	72.312	Danio_rerio
ENSNBRG00000012749	smarcad1a	84	70.355	ENSDARG00000014041	smarcad1a	69	72.496	Danio_rerio
ENSNBRG00000012749	smarcad1a	82	62.178	ENSDNOG00000000806	-	66	63.274	Dasypus_novemcinctus
ENSNBRG00000012749	smarcad1a	82	62.049	ENSDORG00000012331	Smarcad1	66	62.887	Dipodomys_ordii
ENSNBRG00000012749	smarcad1a	76	45.101	FBgn0032157	Etl1	76	45.038	Drosophila_melanogaster
ENSNBRG00000012749	smarcad1a	75	48.666	ENSEBUG00000003969	smarcad1a	98	48.265	Eptatretus_burgeri
ENSNBRG00000012749	smarcad1a	85	61.236	ENSEASG00005012382	SMARCAD1	78	61.207	Equus_asinus_asinus
ENSNBRG00000012749	smarcad1a	85	61.236	ENSECAG00000011562	SMARCAD1	66	63.127	Equus_caballus
ENSNBRG00000012749	smarcad1a	80	70.579	ENSELUG00000019154	smarcad1b	68	70.579	Esox_lucius
ENSNBRG00000012749	smarcad1a	86	76.495	ENSELUG00000018535	smarcad1a	67	79.472	Esox_lucius
ENSNBRG00000012749	smarcad1a	85	61.236	ENSFCAG00000003958	SMARCAD1	97	67.358	Felis_catus
ENSNBRG00000012749	smarcad1a	78	66.114	ENSFALG00000006089	SMARCAD1	65	66.114	Ficedula_albicollis
ENSNBRG00000012749	smarcad1a	80	62.979	ENSFDAG00000017027	SMARCAD1	66	62.979	Fukomys_damarensis
ENSNBRG00000012749	smarcad1a	84	80.198	ENSFHEG00000012778	smarcad1a	63	81.341	Fundulus_heteroclitus
ENSNBRG00000012749	smarcad1a	85	78.962	ENSGMOG00000018995	smarcad1a	80	80.842	Gadus_morhua
ENSNBRG00000012749	smarcad1a	85	60.694	ENSGALG00000037339	SMARCAD1	81	63.299	Gallus_gallus
ENSNBRG00000012749	smarcad1a	97	71.656	ENSGAFG00000013498	smarcad1a	61	78.863	Gambusia_affinis
ENSNBRG00000012749	smarcad1a	83	84.218	ENSGACG00000007327	smarcad1a	78	85.398	Gasterosteus_aculeatus
ENSNBRG00000012749	smarcad1a	87	60.923	ENSGAGG00000008582	SMARCAD1	65	64.201	Gopherus_agassizii
ENSNBRG00000012749	smarcad1a	85	61.367	ENSGGOG00000023001	SMARCAD1	66	63.274	Gorilla_gorilla
ENSNBRG00000012749	smarcad1a	97	95.931	ENSHBUG00000011042	smarcad1a	76	95.931	Haplochromis_burtoni
ENSNBRG00000012749	smarcad1a	80	62.979	ENSHGLG00000005070	SMARCAD1	66	62.979	Heterocephalus_glaber_female
ENSNBRG00000012749	smarcad1a	80	62.979	ENSHGLG00100006812	SMARCAD1	66	62.979	Heterocephalus_glaber_male
ENSNBRG00000012749	smarcad1a	90	72.919	ENSHCOG00000007848	smarcad1a	63	76.531	Hippocampus_comes
ENSNBRG00000012749	smarcad1a	77	73.053	ENSIPUG00000022817	smarcad1b	73	70.354	Ictalurus_punctatus
ENSNBRG00000012749	smarcad1a	84	68.006	ENSIPUG00000000242	smarcad1a	66	74.224	Ictalurus_punctatus
ENSNBRG00000012749	smarcad1a	80	62.794	ENSSTOG00000001227	SMARCAD1	66	62.794	Ictidomys_tridecemlineatus
ENSNBRG00000012749	smarcad1a	87	60.109	ENSJJAG00000022342	Smarcad1	61	66.346	Jaculus_jaculus
ENSNBRG00000012749	smarcad1a	92	78.913	ENSKMAG00000021351	smarcad1a	76	76.572	Kryptolebias_marmoratus
ENSNBRG00000012749	smarcad1a	88	84.060	ENSLBEG00000008088	smarcad1a	73	79.618	Labrus_bergylta
ENSNBRG00000012749	smarcad1a	77	73.375	ENSLOCG00000012909	smarcad1a	68	72.065	Lepisosteus_oculatus
ENSNBRG00000012749	smarcad1a	85	59.607	ENSLAFG00000000040	SMARCAD1	66	61.799	Loxodonta_africana
ENSNBRG00000012749	smarcad1a	85	61.367	ENSMFAG00000042606	SMARCAD1	76	63.274	Macaca_fascicularis
ENSNBRG00000012749	smarcad1a	85	61.367	ENSMMUG00000022242	SMARCAD1	76	63.274	Macaca_mulatta
ENSNBRG00000012749	smarcad1a	85	61.367	ENSMNEG00000038117	SMARCAD1	97	67.358	Macaca_nemestrina
ENSNBRG00000012749	smarcad1a	85	61.367	ENSMLEG00000038333	SMARCAD1	97	67.358	Mandrillus_leucophaeus
ENSNBRG00000012749	smarcad1a	91	84.052	ENSMAMG00000000933	smarcad1a	76	80.491	Mastacembelus_armatus
ENSNBRG00000012749	smarcad1a	97	91.985	ENSMZEG00005005203	smarcad1a	76	91.985	Maylandia_zebra
ENSNBRG00000012749	smarcad1a	73	64.782	ENSMGAG00000005577	SMARCAD1	64	64.782	Meleagris_gallopavo
ENSNBRG00000012749	smarcad1a	86	60.137	ENSMAUG00000008417	Smarcad1	66	63.289	Mesocricetus_auratus
ENSNBRG00000012749	smarcad1a	85	61.064	ENSMICG00000009746	SMARCAD1	61	66.454	Microcebus_murinus
ENSNBRG00000012749	smarcad1a	85	60.979	ENSMOCG00000017142	Smarcad1	69	61.254	Microtus_ochrogaster
ENSNBRG00000012749	smarcad1a	82	87.609	ENSMMOG00000000275	smarcad1a	91	85.823	Mola_mola
ENSNBRG00000012749	smarcad1a	85	61.925	ENSMODG00000019268	SMARCAD1	61	67.468	Monodelphis_domestica
ENSNBRG00000012749	smarcad1a	74	66.346	MGP_CAROLIEiJ_G0028458	-	50	66.346	Mus_caroli
ENSNBRG00000012749	smarcad1a	74	66.346	ENSMUSG00000029920	Smarcad1	61	66.346	Mus_musculus
ENSNBRG00000012749	smarcad1a	74	66.346	MGP_PahariEiJ_G0022198	Smarcad1	61	66.346	Mus_pahari
ENSNBRG00000012749	smarcad1a	74	66.346	MGP_SPRETEiJ_G0029462	Smarcad1	61	66.346	Mus_spretus
ENSNBRG00000012749	smarcad1a	85	61.236	ENSMPUG00000002111	SMARCAD1	66	63.127	Mustela_putorius_furo
ENSNBRG00000012749	smarcad1a	87	60.244	ENSMLUG00000000425	SMARCAD1	65	63.189	Myotis_lucifugus
ENSNBRG00000012749	smarcad1a	85	60.674	ENSNGAG00000000810	Smarcad1	62	66.186	Nannospalax_galili
ENSNBRG00000012749	smarcad1a	85	61.367	ENSNLEG00000014225	SMARCAD1	97	67.358	Nomascus_leucogenys
ENSNBRG00000012749	smarcad1a	85	61.399	ENSODEG00000004334	SMARCAD1	66	63.289	Octodon_degus
ENSNBRG00000012749	smarcad1a	85	95.728	ENSONIG00000015059	smarcad1a	75	90.602	Oreochromis_niloticus
ENSNBRG00000012749	smarcad1a	74	68.371	ENSOANG00000013764	SMARCAD1	81	64.845	Ornithorhynchus_anatinus
ENSNBRG00000012749	smarcad1a	82	61.891	ENSOCUG00000017283	SMARCAD1	66	62.979	Oryctolagus_cuniculus
ENSNBRG00000012749	smarcad1a	94	75.128	ENSORLG00000004869	smarcad1a	74	76.148	Oryzias_latipes
ENSNBRG00000012749	smarcad1a	94	76.276	ENSORLG00020020569	smarcad1a	74	76.276	Oryzias_latipes_hni
ENSNBRG00000012749	smarcad1a	94	75.255	ENSORLG00015009045	smarcad1a	74	76.276	Oryzias_latipes_hsok
ENSNBRG00000012749	smarcad1a	97	75.307	ENSOMEG00000023032	smarcad1a	66	82.969	Oryzias_melastigma
ENSNBRG00000012749	smarcad1a	85	60.784	ENSOGAG00000011444	SMARCAD1	66	62.647	Otolemur_garnettii
ENSNBRG00000012749	smarcad1a	85	61.010	ENSOARG00000017851	SMARCAD1	66	63.127	Ovis_aries
ENSNBRG00000012749	smarcad1a	85	61.367	ENSPPAG00000035715	SMARCAD1	66	63.274	Pan_paniscus
ENSNBRG00000012749	smarcad1a	85	61.236	ENSPPRG00000024756	SMARCAD1	97	67.358	Panthera_pardus
ENSNBRG00000012749	smarcad1a	85	61.064	ENSPTIG00000017868	SMARCAD1	66	63.088	Panthera_tigris_altaica
ENSNBRG00000012749	smarcad1a	85	61.367	ENSPTRG00000023126	SMARCAD1	97	67.358	Pan_troglodytes
ENSNBRG00000012749	smarcad1a	85	60.000	ENSPANG00000019757	SMARCAD1	65	63.217	Papio_anubis
ENSNBRG00000012749	smarcad1a	87	61.058	ENSPSIG00000010255	SMARCAD1	65	64.497	Pelodiscus_sinensis
ENSNBRG00000012749	smarcad1a	75	78.309	ENSPMGG00000010735	smarcad1a	94	76.692	Periophthalmus_magnuspinnatus
ENSNBRG00000012749	smarcad1a	84	53.315	ENSPEMG00000001854	Smarcad1	66	55.244	Peromyscus_maniculatus_bairdii
ENSNBRG00000012749	smarcad1a	82	55.698	ENSPMAG00000003516	smarcad1a	67	57.016	Petromyzon_marinus
ENSNBRG00000012749	smarcad1a	88	60.509	ENSPCIG00000008137	SMARCAD1	90	64.776	Phascolarctos_cinereus
ENSNBRG00000012749	smarcad1a	97	75.490	ENSPFOG00000019116	smarcad1a	63	82.945	Poecilia_formosa
ENSNBRG00000012749	smarcad1a	97	75.368	ENSPLAG00000000108	smarcad1a	63	82.799	Poecilia_latipinna
ENSNBRG00000012749	smarcad1a	97	75.490	ENSPMEG00000009155	smarcad1a	63	82.945	Poecilia_mexicana
ENSNBRG00000012749	smarcad1a	97	75.398	ENSPREG00000018185	smarcad1a	70	82.945	Poecilia_reticulata
ENSNBRG00000012749	smarcad1a	85	60.918	ENSPPYG00000014935	SMARCAD1	66	62.794	Pongo_abelii
ENSNBRG00000012749	smarcad1a	73	58.211	ENSPCOG00000020478	SMARCAD1	69	60.345	Propithecus_coquereli
ENSNBRG00000012749	smarcad1a	82	61.406	ENSPVAG00000001760	SMARCAD1	65	62.969	Pteropus_vampyrus
ENSNBRG00000012749	smarcad1a	100	96.048	ENSPNYG00000010087	smarcad1a	100	96.048	Pundamilia_nyererei
ENSNBRG00000012749	smarcad1a	87	68.320	ENSPNAG00000010099	smarcad1b	71	72.864	Pygocentrus_nattereri
ENSNBRG00000012749	smarcad1a	90	66.931	ENSPNAG00000001663	smarcad1a	69	71.598	Pygocentrus_nattereri
ENSNBRG00000012749	smarcad1a	74	66.667	ENSRNOG00000006391	Smarcad1	61	66.667	Rattus_norvegicus
ENSNBRG00000012749	smarcad1a	85	61.367	ENSRBIG00000041989	SMARCAD1	66	63.274	Rhinopithecus_bieti
ENSNBRG00000012749	smarcad1a	85	61.367	ENSRROG00000035309	SMARCAD1	66	63.274	Rhinopithecus_roxellana
ENSNBRG00000012749	smarcad1a	85	61.367	ENSSBOG00000032114	SMARCAD1	97	67.358	Saimiri_boliviensis_boliviensis
ENSNBRG00000012749	smarcad1a	85	61.925	ENSSHAG00000001279	SMARCAD1	61	67.788	Sarcophilus_harrisii
ENSNBRG00000012749	smarcad1a	82	70.360	ENSSFOG00015020909	smarcad1a	89	71.620	Scleropages_formosus
ENSNBRG00000012749	smarcad1a	91	66.877	ENSSFOG00015016814	smarcad1b	66	74.370	Scleropages_formosus
ENSNBRG00000012749	smarcad1a	97	82.095	ENSSMAG00000001326	smarcad1a	76	80.268	Scophthalmus_maximus
ENSNBRG00000012749	smarcad1a	98	82.382	ENSSDUG00000022338	smarcad1a	99	81.753	Seriola_dumerili
ENSNBRG00000012749	smarcad1a	97	81.395	ENSSLDG00000024986	smarcad1a	76	81.151	Seriola_lalandi_dorsalis
ENSNBRG00000012749	smarcad1a	69	69.031	ENSSPUG00000004633	SMARCAD1	97	69.031	Sphenodon_punctatus
ENSNBRG00000012749	smarcad1a	97	81.863	ENSSPAG00000001970	smarcad1a	77	82.375	Stegastes_partitus
ENSNBRG00000012749	smarcad1a	85	61.236	ENSSSCG00000009193	SMARCAD1	80	63.127	Sus_scrofa
ENSNBRG00000012749	smarcad1a	85	61.241	ENSTGUG00000003127	SMARCAD1	88	63.492	Taeniopygia_guttata
ENSNBRG00000012749	smarcad1a	84	83.803	ENSTNIG00000017585	smarcad1a	77	86.222	Tetraodon_nigroviridis
ENSNBRG00000012749	smarcad1a	69	69.815	ENSTBEG00000002789	SMARCAD1	57	69.815	Tupaia_belangeri
ENSNBRG00000012749	smarcad1a	85	60.870	ENSTTRG00000000226	SMARCAD1	67	63.134	Tursiops_truncatus
ENSNBRG00000012749	smarcad1a	85	61.236	ENSUAMG00000022262	SMARCAD1	73	63.220	Ursus_americanus
ENSNBRG00000012749	smarcad1a	85	61.236	ENSUMAG00000004549	SMARCAD1	66	63.127	Ursus_maritimus
ENSNBRG00000012749	smarcad1a	85	61.236	ENSVVUG00000007271	SMARCAD1	82	63.018	Vulpes_vulpes
ENSNBRG00000012749	smarcad1a	87	54.993	ENSXETG00000019214	smarcad1	76	58.493	Xenopus_tropicalis
ENSNBRG00000012749	smarcad1a	98	70.878	ENSXCOG00000005232	smarcad1a	85	81.487	Xiphophorus_couchianus
ENSNBRG00000012749	smarcad1a	96	75.990	ENSXMAG00000015350	smarcad1a	63	82.362	Xiphophorus_maculatus