EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000012873 (Gene tree)
Gene ID: 102778372
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA-binding domain-containing protein 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 49695 bases
Position: chrJH422278.1:7911051-7960745
Accession: 102778372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000016774	S1	PF00575.23	2.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000017229	-	2517	-	ENSNBRP00000016778	838 (aa)	-	-
ENSNBRT00000017224	-	2862	XM_006783609	ENSNBRP00000016774	953 (aa)	XP_006783672	-

Gene Model

Click here to download ENSNBRG00000012873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000012873's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000012873	si:ch211-117n7.8	96	51.559	ENSG00000068784	SRBD1	98	50.199	Homo_sapiens
ENSNBRG00000012873	si:ch211-117n7.8	100	80.140	ENSAPOG00000005103	si:ch211-117n7.8	98	79.840	Acanthochromis_polyacanthus
ENSNBRG00000012873	si:ch211-117n7.8	85	56.176	ENSAMEG00000005993	SRBD1	84	56.057	Ailuropoda_melanoleuca
ENSNBRG00000012873	si:ch211-117n7.8	99	82.779	ENSACIG00000009875	si:ch211-117n7.8	100	82.779	Amphilophus_citrinellus
ENSNBRG00000012873	si:ch211-117n7.8	100	78.721	ENSAOCG00000024718	si:ch211-117n7.8	98	78.721	Amphiprion_ocellaris
ENSNBRG00000012873	si:ch211-117n7.8	99	79.412	ENSAPEG00000002645	si:ch211-117n7.8	100	79.412	Amphiprion_percula
ENSNBRG00000012873	si:ch211-117n7.8	100	78.521	ENSATEG00000010844	si:ch211-117n7.8	98	78.521	Anabas_testudineus
ENSNBRG00000012873	si:ch211-117n7.8	94	54.102	ENSAPLG00000006313	SRBD1	97	52.679	Anas_platyrhynchos
ENSNBRG00000012873	si:ch211-117n7.8	99	50.407	ENSANAG00000025573	SRBD1	89	53.303	Aotus_nancymaae
ENSNBRG00000012873	si:ch211-117n7.8	100	92.008	ENSACLG00000024219	si:ch211-117n7.8	98	92.008	Astatotilapia_calliptera
ENSNBRG00000012873	si:ch211-117n7.8	99	63.701	ENSAMXG00000004294	SRBD1	97	64.476	Astyanax_mexicanus
ENSNBRG00000012873	si:ch211-117n7.8	85	56.190	ENSBTAG00000007508	SRBD1	81	55.767	Bos_taurus
ENSNBRG00000012873	si:ch211-117n7.8	68	30.104	WBGene00022830	ZK973.1	81	30.104	Caenorhabditis_elegans
ENSNBRG00000012873	si:ch211-117n7.8	96	51.613	ENSCJAG00000000727	SRBD1	84	55.938	Callithrix_jacchus
ENSNBRG00000012873	si:ch211-117n7.8	85	56.280	ENSCAFG00000002554	SRBD1	84	56.161	Canis_familiaris
ENSNBRG00000012873	si:ch211-117n7.8	85	56.936	ENSCAFG00020026284	SRBD1	97	56.611	Canis_lupus_dingo
ENSNBRG00000012873	si:ch211-117n7.8	85	56.190	ENSCHIG00000016535	SRBD1	82	55.833	Capra_hircus
ENSNBRG00000012873	si:ch211-117n7.8	99	51.972	ENSTSYG00000012797	SRBD1	96	52.282	Carlito_syrichta
ENSNBRG00000012873	si:ch211-117n7.8	96	52.804	ENSCPOG00000004773	SRBD1	85	56.325	Cavia_porcellus
ENSNBRG00000012873	si:ch211-117n7.8	96	51.509	ENSCCAG00000025589	SRBD1	90	53.319	Cebus_capucinus
ENSNBRG00000012873	si:ch211-117n7.8	96	51.670	ENSCATG00000039530	SRBD1	98	50.150	Cercocebus_atys
ENSNBRG00000012873	si:ch211-117n7.8	99	51.742	ENSCLAG00000008623	SRBD1	85	56.818	Chinchilla_lanigera
ENSNBRG00000012873	si:ch211-117n7.8	96	51.566	ENSCSAG00000013350	SRBD1	98	50.050	Chlorocebus_sabaeus
ENSNBRG00000012873	si:ch211-117n7.8	71	74.419	ENSCHOG00000003805	SRBD1	69	74.419	Choloepus_hoffmanni
ENSNBRG00000012873	si:ch211-117n7.8	85	57.569	ENSCPBG00000005677	SRBD1	97	52.610	Chrysemys_picta_bellii
ENSNBRG00000012873	si:ch211-117n7.8	79	39.570	ENSCING00000005950	-	99	39.570	Ciona_intestinalis
ENSNBRG00000012873	si:ch211-117n7.8	80	40.868	ENSCSAVG00000000861	-	99	40.868	Ciona_savignyi
ENSNBRG00000012873	si:ch211-117n7.8	99	50.101	ENSCANG00000016307	SRBD1	89	53.356	Colobus_angolensis_palliatus
ENSNBRG00000012873	si:ch211-117n7.8	85	56.543	ENSCGRG00001000513	Srbd1	84	56.543	Cricetulus_griseus_chok1gshd
ENSNBRG00000012873	si:ch211-117n7.8	85	56.543	ENSCGRG00000002283	Srbd1	84	56.543	Cricetulus_griseus_crigri
ENSNBRG00000012873	si:ch211-117n7.8	99	70.761	ENSCSEG00000000856	si:ch211-117n7.8	97	70.863	Cynoglossus_semilaevis
ENSNBRG00000012873	si:ch211-117n7.8	100	75.051	ENSCVAG00000020212	si:ch211-117n7.8	99	75.051	Cyprinodon_variegatus
ENSNBRG00000012873	si:ch211-117n7.8	85	55.279	ENSDNOG00000018686	SRBD1	83	55.160	Dasypus_novemcinctus
ENSNBRG00000012873	si:ch211-117n7.8	99	50.660	ENSDORG00000010468	Srbd1	84	56.197	Dipodomys_ordii
ENSNBRG00000012873	si:ch211-117n7.8	80	33.879	FBgn0051156	CG31156	79	33.879	Drosophila_melanogaster
ENSNBRG00000012873	si:ch211-117n7.8	90	57.866	ENSETEG00000000739	SRBD1	77	57.713	Echinops_telfairi
ENSNBRG00000012873	si:ch211-117n7.8	75	46.879	ENSEBUG00000008902	si:ch211-117n7.8	95	47.018	Eptatretus_burgeri
ENSNBRG00000012873	si:ch211-117n7.8	96	50.849	ENSEASG00005003132	SRBD1	98	54.074	Equus_asinus_asinus
ENSNBRG00000012873	si:ch211-117n7.8	96	51.455	ENSECAG00000013865	SRBD1	82	55.924	Equus_caballus
ENSNBRG00000012873	si:ch211-117n7.8	99	65.157	ENSELUG00000012592	si:ch211-117n7.8	97	64.735	Esox_lucius
ENSNBRG00000012873	si:ch211-117n7.8	85	56.280	ENSFCAG00000005101	SRBD1	84	55.740	Felis_catus
ENSNBRG00000012873	si:ch211-117n7.8	95	53.426	ENSFALG00000012966	SRBD1	97	51.626	Ficedula_albicollis
ENSNBRG00000012873	si:ch211-117n7.8	99	51.224	ENSFDAG00000016670	SRBD1	85	56.815	Fukomys_damarensis
ENSNBRG00000012873	si:ch211-117n7.8	100	76.148	ENSFHEG00000019480	si:ch211-117n7.8	98	75.549	Fundulus_heteroclitus
ENSNBRG00000012873	si:ch211-117n7.8	52	70.657	ENSGMOG00000018010	-	100	70.657	Gadus_morhua
ENSNBRG00000012873	si:ch211-117n7.8	85	58.204	ENSGALG00000009990	SRBD1	97	52.492	Gallus_gallus
ENSNBRG00000012873	si:ch211-117n7.8	100	75.831	ENSGAFG00000019664	si:ch211-117n7.8	97	75.831	Gambusia_affinis
ENSNBRG00000012873	si:ch211-117n7.8	64	85.918	ENSGACG00000010794	si:ch211-117n7.8	100	85.918	Gasterosteus_aculeatus
ENSNBRG00000012873	si:ch211-117n7.8	94	52.047	ENSGAGG00000006166	SRBD1	99	57.688	Gopherus_agassizii
ENSNBRG00000012873	si:ch211-117n7.8	99	50.907	ENSGGOG00000005910	SRBD1	86	56.109	Gorilla_gorilla
ENSNBRG00000012873	si:ch211-117n7.8	99	82.384	ENSHBUG00000013207	si:ch211-117n7.8	99	82.384	Haplochromis_burtoni
ENSNBRG00000012873	si:ch211-117n7.8	99	51.524	ENSHGLG00000018153	-	84	56.715	Heterocephalus_glaber_female
ENSNBRG00000012873	si:ch211-117n7.8	99	51.524	ENSHGLG00100015183	-	84	56.595	Heterocephalus_glaber_male
ENSNBRG00000012873	si:ch211-117n7.8	98	65.882	ENSIPUG00000009661	srbd1	97	65.441	Ictalurus_punctatus
ENSNBRG00000012873	si:ch211-117n7.8	85	57.143	ENSSTOG00000005898	SRBD1	84	57.143	Ictidomys_tridecemlineatus
ENSNBRG00000012873	si:ch211-117n7.8	99	49.391	ENSJJAG00000022244	Srbd1	94	50.745	Jaculus_jaculus
ENSNBRG00000012873	si:ch211-117n7.8	100	79.394	ENSKMAG00000003473	si:ch211-117n7.8	98	79.053	Kryptolebias_marmoratus
ENSNBRG00000012873	si:ch211-117n7.8	100	76.807	ENSLBEG00000027518	si:ch211-117n7.8	98	76.506	Labrus_bergylta
ENSNBRG00000012873	si:ch211-117n7.8	86	57.126	ENSLACG00000009790	SRBD1	99	57.008	Latimeria_chalumnae
ENSNBRG00000012873	si:ch211-117n7.8	94	60.673	ENSLOCG00000016360	si:ch211-117n7.8	96	59.667	Lepisosteus_oculatus
ENSNBRG00000012873	si:ch211-117n7.8	96	51.778	ENSMFAG00000042026	SRBD1	90	53.481	Macaca_fascicularis
ENSNBRG00000012873	si:ch211-117n7.8	91	53.591	ENSMMUG00000003490	SRBD1	98	50.861	Macaca_mulatta
ENSNBRG00000012873	si:ch211-117n7.8	96	50.105	ENSMNEG00000034701	SRBD1	90	51.713	Macaca_nemestrina
ENSNBRG00000012873	si:ch211-117n7.8	96	51.883	ENSMLEG00000000745	SRBD1	90	53.591	Mandrillus_leucophaeus
ENSNBRG00000012873	si:ch211-117n7.8	100	78.433	ENSMAMG00000021921	si:ch211-117n7.8	98	78.963	Mastacembelus_armatus
ENSNBRG00000012873	si:ch211-117n7.8	100	92.108	ENSMZEG00005027369	si:ch211-117n7.8	98	92.108	Maylandia_zebra
ENSNBRG00000012873	si:ch211-117n7.8	80	57.606	ENSMGAG00000010273	SRBD1	99	57.606	Meleagris_gallopavo
ENSNBRG00000012873	si:ch211-117n7.8	80	54.926	ENSMAUG00000013916	Srbd1	95	54.926	Mesocricetus_auratus
ENSNBRG00000012873	si:ch211-117n7.8	96	51.925	ENSMICG00000007835	SRBD1	98	50.548	Microcebus_murinus
ENSNBRG00000012873	si:ch211-117n7.8	99	50.507	ENSMOCG00000018716	Srbd1	84	56.423	Microtus_ochrogaster
ENSNBRG00000012873	si:ch211-117n7.8	99	75.102	ENSMMOG00000007507	si:ch211-117n7.8	100	75.102	Mola_mola
ENSNBRG00000012873	si:ch211-117n7.8	100	76.892	ENSMALG00000001562	si:ch211-117n7.8	98	77.390	Monopterus_albus
ENSNBRG00000012873	si:ch211-117n7.8	91	54.060	MGP_CAROLIEiJ_G0021934	Srbd1	99	58.553	Mus_caroli
ENSNBRG00000012873	si:ch211-117n7.8	99	50.966	ENSMUSG00000024135	Srbd1	96	55.970	Mus_musculus
ENSNBRG00000012873	si:ch211-117n7.8	99	50.716	MGP_PahariEiJ_G0020924	Srbd1	91	53.504	Mus_pahari
ENSNBRG00000012873	si:ch211-117n7.8	99	50.966	MGP_SPRETEiJ_G0022850	Srbd1	91	53.838	Mus_spretus
ENSNBRG00000012873	si:ch211-117n7.8	85	56.043	ENSMLUG00000007039	SRBD1	90	53.032	Myotis_lucifugus
ENSNBRG00000012873	si:ch211-117n7.8	99	49.111	ENSNGAG00000011893	Srbd1	84	54.051	Nannospalax_galili
ENSNBRG00000012873	si:ch211-117n7.8	85	55.872	ENSNLEG00000016877	SRBD1	84	55.753	Nomascus_leucogenys
ENSNBRG00000012873	si:ch211-117n7.8	95	52.497	ENSODEG00000012095	SRBD1	96	51.042	Octodon_degus
ENSNBRG00000012873	si:ch211-117n7.8	100	91.908	ENSONIG00000000945	si:ch211-117n7.8	100	92.280	Oreochromis_niloticus
ENSNBRG00000012873	si:ch211-117n7.8	96	52.610	ENSOCUG00000015385	SRBD1	96	52.599	Oryctolagus_cuniculus
ENSNBRG00000012873	si:ch211-117n7.8	100	71.171	ENSORLG00000004427	si:ch211-117n7.8	98	71.171	Oryzias_latipes
ENSNBRG00000012873	si:ch211-117n7.8	100	74.200	ENSORLG00020012792	si:ch211-117n7.8	98	74.200	Oryzias_latipes_hni
ENSNBRG00000012873	si:ch211-117n7.8	100	73.974	ENSORLG00015018598	si:ch211-117n7.8	98	73.974	Oryzias_latipes_hsok
ENSNBRG00000012873	si:ch211-117n7.8	100	72.946	ENSOMEG00000012229	si:ch211-117n7.8	97	78.409	Oryzias_melastigma
ENSNBRG00000012873	si:ch211-117n7.8	99	49.850	ENSOGAG00000001076	SRBD1	98	48.551	Otolemur_garnettii
ENSNBRG00000012873	si:ch211-117n7.8	85	52.114	ENSOARG00000005958	SRBD1	84	51.771	Ovis_aries
ENSNBRG00000012873	si:ch211-117n7.8	85	55.872	ENSPPAG00000038442	SRBD1	98	50.100	Pan_paniscus
ENSNBRG00000012873	si:ch211-117n7.8	85	56.584	ENSPPRG00000003449	SRBD1	84	56.465	Panthera_pardus
ENSNBRG00000012873	si:ch211-117n7.8	85	56.584	ENSPTIG00000012495	SRBD1	84	56.465	Panthera_tigris_altaica
ENSNBRG00000012873	si:ch211-117n7.8	85	55.872	ENSPTRG00000011889	SRBD1	98	50.100	Pan_troglodytes
ENSNBRG00000012873	si:ch211-117n7.8	91	53.591	ENSPANG00000008063	SRBD1	90	53.208	Papio_anubis
ENSNBRG00000012873	si:ch211-117n7.8	95	62.724	ENSPKIG00000021973	si:ch211-117n7.8	97	60.692	Paramormyrops_kingsleyae
ENSNBRG00000012873	si:ch211-117n7.8	85	57.330	ENSPSIG00000008992	SRBD1	97	51.512	Pelodiscus_sinensis
ENSNBRG00000012873	si:ch211-117n7.8	100	70.325	ENSPMGG00000013348	si:ch211-117n7.8	99	71.501	Periophthalmus_magnuspinnatus
ENSNBRG00000012873	si:ch211-117n7.8	85	54.333	ENSPEMG00000020684	Srbd1	84	54.333	Peromyscus_maniculatus_bairdii
ENSNBRG00000012873	si:ch211-117n7.8	100	76.761	ENSPFOG00000010650	si:ch211-117n7.8	98	76.559	Poecilia_formosa
ENSNBRG00000012873	si:ch211-117n7.8	100	76.962	ENSPLAG00000002141	si:ch211-117n7.8	98	76.761	Poecilia_latipinna
ENSNBRG00000012873	si:ch211-117n7.8	100	76.861	ENSPMEG00000018537	si:ch211-117n7.8	98	76.660	Poecilia_mexicana
ENSNBRG00000012873	si:ch211-117n7.8	99	76.122	ENSPREG00000003258	si:ch211-117n7.8	97	75.918	Poecilia_reticulata
ENSNBRG00000012873	si:ch211-117n7.8	96	47.902	ENSPPYG00000012444	SRBD1	88	49.477	Pongo_abelii
ENSNBRG00000012873	si:ch211-117n7.8	76	50.796	ENSPCAG00000005629	SRBD1	80	50.796	Procavia_capensis
ENSNBRG00000012873	si:ch211-117n7.8	96	45.141	ENSPCOG00000017669	SRBD1	98	43.944	Propithecus_coquereli
ENSNBRG00000012873	si:ch211-117n7.8	74	55.463	ENSPVAG00000001782	SRBD1	72	54.897	Pteropus_vampyrus
ENSNBRG00000012873	si:ch211-117n7.8	99	94.753	ENSPNYG00000000508	si:ch211-117n7.8	100	94.753	Pundamilia_nyererei
ENSNBRG00000012873	si:ch211-117n7.8	96	65.717	ENSPNAG00000013492	SRBD1	97	64.410	Pygocentrus_nattereri
ENSNBRG00000012873	si:ch211-117n7.8	84	55.636	ENSRNOG00000014720	Srbd1	83	55.636	Rattus_norvegicus
ENSNBRG00000012873	si:ch211-117n7.8	96	51.464	ENSRBIG00000033486	SRBD1	89	53.631	Rhinopithecus_bieti
ENSNBRG00000012873	si:ch211-117n7.8	96	51.464	ENSRROG00000041599	SRBD1	89	53.631	Rhinopithecus_roxellana
ENSNBRG00000012873	si:ch211-117n7.8	99	50.204	ENSSBOG00000024982	SRBD1	90	52.876	Saimiri_boliviensis_boliviensis
ENSNBRG00000012873	si:ch211-117n7.8	99	59.979	ENSSFOG00015001128	si:ch211-117n7.8	96	61.605	Scleropages_formosus
ENSNBRG00000012873	si:ch211-117n7.8	100	77.191	ENSSMAG00000018256	si:ch211-117n7.8	98	77.191	Scophthalmus_maximus
ENSNBRG00000012873	si:ch211-117n7.8	99	79.191	ENSSLDG00000023189	si:ch211-117n7.8	100	78.585	Seriola_lalandi_dorsalis
ENSNBRG00000012873	si:ch211-117n7.8	96	48.837	ENSSARG00000009740	SRBD1	96	48.042	Sorex_araneus
ENSNBRG00000012873	si:ch211-117n7.8	86	57.957	ENSSPUG00000010475	SRBD1	94	57.738	Sphenodon_punctatus
ENSNBRG00000012873	si:ch211-117n7.8	99	74.950	ENSSPAG00000008092	-	99	75.896	Stegastes_partitus
ENSNBRG00000012873	si:ch211-117n7.8	95	52.033	ENSSSCG00000008445	SRBD1	82	56.109	Sus_scrofa
ENSNBRG00000012873	si:ch211-117n7.8	85	57.637	ENSTGUG00000003878	SRBD1	100	57.569	Taeniopygia_guttata
ENSNBRG00000012873	si:ch211-117n7.8	100	73.088	ENSTRUG00000007080	si:ch211-117n7.8	98	77.840	Takifugu_rubripes
ENSNBRG00000012873	si:ch211-117n7.8	99	70.669	ENSTNIG00000007464	si:ch211-117n7.8	98	70.079	Tetraodon_nigroviridis
ENSNBRG00000012873	si:ch211-117n7.8	61	80.851	ENSTBEG00000004556	SRBD1	61	80.851	Tupaia_belangeri
ENSNBRG00000012873	si:ch211-117n7.8	79	56.360	ENSTTRG00000011871	SRBD1	74	56.522	Tursiops_truncatus
ENSNBRG00000012873	si:ch211-117n7.8	85	56.480	ENSUAMG00000008126	SRBD1	97	53.791	Ursus_americanus
ENSNBRG00000012873	si:ch211-117n7.8	85	56.480	ENSUMAG00000012902	SRBD1	83	56.361	Ursus_maritimus
ENSNBRG00000012873	si:ch211-117n7.8	85	56.005	ENSVPAG00000006825	SRBD1	92	55.886	Vicugna_pacos
ENSNBRG00000012873	si:ch211-117n7.8	87	55.440	ENSVVUG00000005389	SRBD1	87	55.324	Vulpes_vulpes
ENSNBRG00000012873	si:ch211-117n7.8	99	44.412	ENSXETG00000002760	srbd1	98	43.732	Xenopus_tropicalis
ENSNBRG00000012873	si:ch211-117n7.8	100	76.334	ENSXMAG00000016861	si:ch211-117n7.8	98	76.133	Xiphophorus_maculatus