EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNBRG00000013047 (Gene tree)
Gene ID
102778806
Gene Symbol
puf60b
Alias
fe37c05|si:ch211-12p8.2|si:zc12p8.2|wu:fb33e11|wu:fe37c05|zgc:86806
Full Name
poly(U)-binding-splicing factor PUF60-like
Gene Type
protein_coding
Species
Neolamprologus_brichardi
Status
putative
Strand
Minus strand
Length
10001 bases
Position
chrJH422308.1:1583094-1593094
Accession
102778806
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNBRP00000016997RRM_1PF00076.221.5e-3812
ENSNBRP00000016997RRM_1PF00076.221.5e-3822
ENSNBRP00000016989RRM_1PF00076.221.8e-3812
ENSNBRP00000016989RRM_1PF00076.221.8e-3822
ENSNBRP00000017007RRM_1PF00076.221.2e-2312
ENSNBRP00000017007RRM_1PF00076.221.2e-2322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNBRT00000017447-1383XM_006795150ENSNBRP00000016989460 (aa)XP_006795213-
ENSNBRT00000017456-1290-ENSNBRP00000016997429 (aa)--
ENSNBRT00000017467-492-ENSNBRP00000017007163 (aa)--
Gene Model
Click here to download ENSNBRG00000013047's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000013047's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNBRG00000013047puf60b9782.775ENSNBRG00000017223-8380.580
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNBRG00000013047puf60b9784.235ENSG00000179950PUF608492.580Homo_sapiens
ENSNBRG00000013047puf60b10094.639ENSAPOG00000001713puf60b8394.639Acanthochromis_polyacanthus
ENSNBRG00000013047puf60b9781.647ENSAMEG00000006406PUF607779.688Ailuropoda_melanoleuca
ENSNBRG00000013047puf60b9799.281ENSACIG00000021705puf60b8199.281Amphilophus_citrinellus
ENSNBRG00000013047puf60b9775.598ENSACIG00000003263-8274.318Amphilophus_citrinellus
ENSNBRG00000013047puf60b9782.536ENSAOCG00000015558-8381.027Amphiprion_ocellaris
ENSNBRG00000013047puf60b9796.643ENSAOCG00000005395puf60b8394.725Amphiprion_ocellaris
ENSNBRG00000013047puf60b9789.688ENSAPEG00000011923puf60b8188.009Amphiprion_percula
ENSNBRG00000013047puf60b9570.387ENSAPEG00000001836-8173.634Amphiprion_percula
ENSNBRG00000013047puf60b9797.602ENSATEG00000001730puf60b8295.701Anabas_testudineus
ENSNBRG00000013047puf60b9781.340ENSATEG00000006303-8379.911Anabas_testudineus
ENSNBRG00000013047puf60b9784.706ENSAPLG00000010150PUF608382.589Anas_platyrhynchos
ENSNBRG00000013047puf60b9783.879ENSACAG00000001645PUF608180.973Anolis_carolinensis
ENSNBRG00000013047puf60b9784.235ENSANAG00000018626PUF608382.805Aotus_nancymaae
ENSNBRG00000013047puf60b9799.281ENSACLG00000004462puf60b8199.281Astatotilapia_calliptera
ENSNBRG00000013047puf60b5372.414ENSACLG00000016311-6496.000Astatotilapia_calliptera
ENSNBRG00000013047puf60b8392.179ENSAMXG00000041030puf60b7983.777Astyanax_mexicanus
ENSNBRG00000013047puf60b9784.615ENSAMXG00000036570puf60a8482.135Astyanax_mexicanus
ENSNBRG00000013047puf60b9784.471ENSBTAG00000037493PUF608084.471Bos_taurus
ENSNBRG00000013047puf60b7842.593WBGene00004389rnp-68352.632Caenorhabditis_elegans
ENSNBRG00000013047puf60b9784.235ENSCJAG00000021485PUF608281.236Callithrix_jacchus
ENSNBRG00000013047puf60b9783.765ENSCAFG00000001400PUF607583.765Canis_familiaris
ENSNBRG00000013047puf60b9784.235ENSCAFG00020018754PUF608281.236Canis_lupus_dingo
ENSNBRG00000013047puf60b9784.471ENSCHIG00000001618PUF607084.471Capra_hircus
ENSNBRG00000013047puf60b9784.235ENSTSYG00000011912PUF608382.805Carlito_syrichta
ENSNBRG00000013047puf60b9784.235ENSCPOG00000014613PUF607881.333Cavia_porcellus
ENSNBRG00000013047puf60b9784.471ENSCCAG00000007744PUF607984.471Cebus_capucinus
ENSNBRG00000013047puf60b9784.235ENSCATG00000035405PUF608281.236Cercocebus_atys
ENSNBRG00000013047puf60b9784.235ENSCLAG00000009154PUF607781.920Chinchilla_lanigera
ENSNBRG00000013047puf60b9784.235ENSCSAG00000008878PUF608382.805Chlorocebus_sabaeus
ENSNBRG00000013047puf60b9783.529ENSCPBG00000005595PUF608280.795Chrysemys_picta_bellii
ENSNBRG00000013047puf60b7658.944ENSCING00000002156-8858.944Ciona_intestinalis
ENSNBRG00000013047puf60b9644.222ENSCING00000008436-8143.640Ciona_intestinalis
ENSNBRG00000013047puf60b9345.137ENSCSAVG00000004765-7844.471Ciona_savignyi
ENSNBRG00000013047puf60b9650.228ENSCSAVG00000001385-8351.131Ciona_savignyi
ENSNBRG00000013047puf60b9784.834ENSCANG00000041843PUF6010084.834Colobus_angolensis_palliatus
ENSNBRG00000013047puf60b9784.471ENSCGRG00001017442Puf607782.143Cricetulus_griseus_chok1gshd
ENSNBRG00000013047puf60b9784.471ENSCGRG00000003717Puf607584.471Cricetulus_griseus_crigri
ENSNBRG00000013047puf60b9774.941ENSCSEG00000014845-7574.000Cynoglossus_semilaevis
ENSNBRG00000013047puf60b9796.882ENSCSEG00000019887puf60b7794.570Cynoglossus_semilaevis
ENSNBRG00000013047puf60b8780.376ENSCVAG00000001560-7879.839Cyprinodon_variegatus
ENSNBRG00000013047puf60b9797.362ENSCVAG00000009386puf60b8197.362Cyprinodon_variegatus
ENSNBRG00000013047puf60b9786.052ENSDARG00000032175puf60a9992.340Danio_rerio
ENSNBRG00000013047puf60b9581.948ENSDARG00000001241puf60b9998.413Danio_rerio
ENSNBRG00000013047puf60b9666.268ENSDNOG00000043278PUF607365.517Dasypus_novemcinctus
ENSNBRG00000013047puf60b9784.471ENSDORG00000004585Puf607684.471Dipodomys_ordii
ENSNBRG00000013047puf60b6861.724FBgn0028577hfp7152.861Drosophila_melanogaster
ENSNBRG00000013047puf60b9755.668ENSEBUG00000014291puf60b7159.481Eptatretus_burgeri
ENSNBRG00000013047puf60b9467.568ENSEBUG00000005470-7067.076Eptatretus_burgeri
ENSNBRG00000013047puf60b9784.235ENSEASG00005009695PUF608281.236Equus_asinus_asinus
ENSNBRG00000013047puf60b9784.235ENSECAG00000024681PUF608181.737Equus_caballus
ENSNBRG00000013047puf60b9787.173ENSELUG00000018443-8384.889Esox_lucius
ENSNBRG00000013047puf60b9785.981ENSELUG00000006507puf60b8485.746Esox_lucius
ENSNBRG00000013047puf60b9784.235ENSFCAG00000001045PUF608382.805Felis_catus
ENSNBRG00000013047puf60b9772.941ENSFALG00000001136PUF608271.840Ficedula_albicollis
ENSNBRG00000013047puf60b9784.235ENSFDAG00000017177PUF607782.143Fukomys_damarensis
ENSNBRG00000013047puf60b9280.506ENSFHEG00000021687PUF608081.606Fundulus_heteroclitus
ENSNBRG00000013047puf60b9797.362ENSFHEG00000020046puf60b8395.413Fundulus_heteroclitus
ENSNBRG00000013047puf60b9778.673ENSGMOG00000006392puf60b8276.510Gadus_morhua
ENSNBRG00000013047puf60b7989.213ENSGALG00000039901PUF609489.213Gallus_gallus
ENSNBRG00000013047puf60b9680.193ENSGAFG00000004334-8180.193Gambusia_affinis
ENSNBRG00000013047puf60b9797.122ENSGAFG00000021040puf60b8197.122Gambusia_affinis
ENSNBRG00000013047puf60b9780.815ENSGACG00000004717puf60b8378.747Gasterosteus_aculeatus
ENSNBRG00000013047puf60b9772.619ENSGACG00000001484-8269.794Gasterosteus_aculeatus
ENSNBRG00000013047puf60b9783.529ENSGAGG00000013289PUF607780.795Gopherus_agassizii
ENSNBRG00000013047puf60b9784.235ENSGGOG00000004646PUF608281.457Gorilla_gorilla
ENSNBRG00000013047puf60b9782.775ENSHBUG00000009634-8380.580Haplochromis_burtoni
ENSNBRG00000013047puf60b9799.281ENSHBUG00000015118puf60b8199.281Haplochromis_burtoni
ENSNBRG00000013047puf60b9784.235ENSHGLG00000006111PUF607782.143Heterocephalus_glaber_female
ENSNBRG00000013047puf60b9784.235ENSHGLG00100012362PUF607782.143Heterocephalus_glaber_male
ENSNBRG00000013047puf60b9864.626ENSHCOG00000000378-7274.124Hippocampus_comes
ENSNBRG00000013047puf60b9594.170ENSHCOG00000015541puf60b8494.395Hippocampus_comes
ENSNBRG00000013047puf60b9680.556ENSIPUG00000004660puf60b8378.924Ictalurus_punctatus
ENSNBRG00000013047puf60b9783.294ENSIPUG00000002453puf60a8381.757Ictalurus_punctatus
ENSNBRG00000013047puf60b9784.235ENSSTOG00000025037PUF607584.235Ictidomys_tridecemlineatus
ENSNBRG00000013047puf60b9784.471ENSJJAG00000001076Puf607584.471Jaculus_jaculus
ENSNBRG00000013047puf60b9797.602ENSKMAG00000016745puf60b8395.642Kryptolebias_marmoratus
ENSNBRG00000013047puf60b9775.059ENSKMAG00000010106-8374.720Kryptolebias_marmoratus
ENSNBRG00000013047puf60b9792.806ENSLBEG00000012505puf60b8394.533Labrus_bergylta
ENSNBRG00000013047puf60b8081.818ENSLACG00000005456PUF609581.356Latimeria_chalumnae
ENSNBRG00000013047puf60b9787.589ENSLOCG00000010106puf60b8385.268Lepisosteus_oculatus
ENSNBRG00000013047puf60b9782.824ENSLAFG00000022929PUF607682.824Loxodonta_africana
ENSNBRG00000013047puf60b9784.235ENSMFAG00000043373PUF608281.920Macaca_fascicularis
ENSNBRG00000013047puf60b9784.235ENSMMUG00000013558PUF608281.457Macaca_mulatta
ENSNBRG00000013047puf60b9784.235ENSMNEG00000031099PUF608281.236Macaca_nemestrina
ENSNBRG00000013047puf60b9784.235ENSMLEG00000040009PUF608382.805Mandrillus_leucophaeus
ENSNBRG00000013047puf60b9795.444ENSMAMG00000010394puf60b8395.444Mastacembelus_armatus
ENSNBRG00000013047puf60b9782.578ENSMAMG00000019476-8380.624Mastacembelus_armatus
ENSNBRG00000013047puf60b9782.775ENSMZEG00005019425-8380.580Maylandia_zebra
ENSNBRG00000013047puf60b9799.281ENSMZEG00005018515puf60b8199.281Maylandia_zebra
ENSNBRG00000013047puf60b9784.706ENSMGAG00000013070PUF609589.535Meleagris_gallopavo
ENSNBRG00000013047puf60b8289.167ENSMAUG00000014267-8889.167Mesocricetus_auratus
ENSNBRG00000013047puf60b9264.706ENSMAUG00000018549-7565.037Mesocricetus_auratus
ENSNBRG00000013047puf60b9784.235ENSMICG00000012226PUF608381.596Microcebus_murinus
ENSNBRG00000013047puf60b9784.471ENSMOCG00000018780Puf607584.471Microtus_ochrogaster
ENSNBRG00000013047puf60b9770.406ENSMMOG00000018059-7774.925Mola_mola
ENSNBRG00000013047puf60b9796.882ENSMMOG00000004217puf60b8394.954Mola_mola
ENSNBRG00000013047puf60b9783.765ENSMODG00000009161PUF607683.765Monodelphis_domestica
ENSNBRG00000013047puf60b9787.290ENSMALG00000006797puf60b8187.191Monopterus_albus
ENSNBRG00000013047puf60b9780.622ENSMALG00000000200-8377.232Monopterus_albus
ENSNBRG00000013047puf60b9784.471MGP_CAROLIEiJ_G0019910Puf607782.366Mus_caroli
ENSNBRG00000013047puf60b9784.471ENSMUSG00000002524Puf607782.366Mus_musculus
ENSNBRG00000013047puf60b9784.471MGP_PahariEiJ_G0019920Puf607782.366Mus_pahari
ENSNBRG00000013047puf60b9784.471MGP_SPRETEiJ_G0020812Puf607782.366Mus_spretus
ENSNBRG00000013047puf60b9784.000ENSMPUG00000008137PUF607484.000Mustela_putorius_furo
ENSNBRG00000013047puf60b9777.176ENSMLUG00000013032-8275.000Myotis_lucifugus
ENSNBRG00000013047puf60b9882.791ENSMLUG00000000238-7584.561Myotis_lucifugus
ENSNBRG00000013047puf60b9784.471ENSNGAG00000000712Puf608383.032Nannospalax_galili
ENSNBRG00000013047puf60b9784.235ENSNLEG00000002156PUF608281.457Nomascus_leucogenys
ENSNBRG00000013047puf60b6594.224ENSOPRG00000002147PUF605494.224Ochotona_princeps
ENSNBRG00000013047puf60b9459.113ENSODEG00000015513-7758.473Octodon_degus
ENSNBRG00000013047puf60b7890.000ENSODEG00000014024-8190.000Octodon_degus
ENSNBRG00000013047puf60b9799.281ENSONIG00000006247puf60b8297.285Oreochromis_niloticus
ENSNBRG00000013047puf60b9782.536ENSONIG00000014030-8281.038Oreochromis_niloticus
ENSNBRG00000013047puf60b9767.464ENSOANG00000006962PUF608366.067Ornithorhynchus_anatinus
ENSNBRG00000013047puf60b9780.425ENSORLG00000028655-8180.425Oryzias_latipes
ENSNBRG00000013047puf60b9796.163ENSORLG00000012279puf60b8196.163Oryzias_latipes
ENSNBRG00000013047puf60b9796.163ENSORLG00020007333puf608196.163Oryzias_latipes_hni
ENSNBRG00000013047puf60b9781.190ENSORLG00020018144-8378.000Oryzias_latipes_hni
ENSNBRG00000013047puf60b9794.749ENSORLG00015007718puf60b8195.704Oryzias_latipes_hsok
ENSNBRG00000013047puf60b9781.190ENSORLG00015016833-8377.778Oryzias_latipes_hsok
ENSNBRG00000013047puf60b9696.154ENSOMEG00000001643puf60b8296.154Oryzias_melastigma
ENSNBRG00000013047puf60b9781.623ENSOMEG00000022185-7981.623Oryzias_melastigma
ENSNBRG00000013047puf60b9784.235ENSOGAG00000006259PUF607584.235Otolemur_garnettii
ENSNBRG00000013047puf60b9782.464ENSOARG00000016235PUF607982.464Ovis_aries
ENSNBRG00000013047puf60b9784.235ENSPPAG00000029933PUF608281.236Pan_paniscus
ENSNBRG00000013047puf60b9784.235ENSPPRG00000003257PUF608382.805Panthera_pardus
ENSNBRG00000013047puf60b9781.412ENSPTIG00000009795PUF608378.982Panthera_tigris_altaica
ENSNBRG00000013047puf60b9784.235ENSPTRG00000043963-8281.457Pan_troglodytes
ENSNBRG00000013047puf60b9784.235ENSPTRG00000020670PUF608281.236Pan_troglodytes
ENSNBRG00000013047puf60b9784.235ENSPANG00000021936PUF608281.236Papio_anubis
ENSNBRG00000013047puf60b9788.489ENSPKIG00000012204puf60b8387.615Paramormyrops_kingsleyae
ENSNBRG00000013047puf60b9788.124ENSPKIG00000004295puf60a9991.940Paramormyrops_kingsleyae
ENSNBRG00000013047puf60b9784.471ENSPSIG00000004679PUF608084.471Pelodiscus_sinensis
ENSNBRG00000013047puf60b9794.762ENSPMGG00000013444puf60b8194.762Periophthalmus_magnuspinnatus
ENSNBRG00000013047puf60b9784.471ENSPEMG00000008820Puf607584.471Peromyscus_maniculatus_bairdii
ENSNBRG00000013047puf60b7855.844ENSPMAG00000009884puf60b10085.276Petromyzon_marinus
ENSNBRG00000013047puf60b9784.235ENSPCIG00000020270PUF608084.235Phascolarctos_cinereus
ENSNBRG00000013047puf60b9780.430ENSPFOG00000011118-7980.907Poecilia_formosa
ENSNBRG00000013047puf60b9797.362ENSPFOG00000019217puf60b8291.629Poecilia_formosa
ENSNBRG00000013047puf60b9780.907ENSPLAG00000017025-7380.907Poecilia_latipinna
ENSNBRG00000013047puf60b9797.362ENSPLAG00000010754puf60b8395.413Poecilia_latipinna
ENSNBRG00000013047puf60b9797.362ENSPMEG00000000838puf60b8395.413Poecilia_mexicana
ENSNBRG00000013047puf60b9780.668ENSPMEG00000009767-7381.146Poecilia_mexicana
ENSNBRG00000013047puf60b9697.079ENSPREG00000005440puf60b8297.079Poecilia_reticulata
ENSNBRG00000013047puf60b9783.019ENSPPYG00000018951-9683.019Pongo_abelii
ENSNBRG00000013047puf60b9784.597ENSPCAG00000014837PUF6010084.597Procavia_capensis
ENSNBRG00000013047puf60b9784.000ENSPCOG00000027981PUF608084.000Propithecus_coquereli
ENSNBRG00000013047puf60b9796.203ENSPVAG00000016167PUF606496.203Pteropus_vampyrus
ENSNBRG00000013047puf60b9799.281ENSPNYG00000002556puf60b8199.281Pundamilia_nyererei
ENSNBRG00000013047puf60b9782.775ENSPNYG00000004273-8380.580Pundamilia_nyererei
ENSNBRG00000013047puf60b9782.898ENSPNAG00000019909puf60a8281.798Pygocentrus_nattereri
ENSNBRG00000013047puf60b9579.115ENSPNAG00000019415puf60b7078.624Pygocentrus_nattereri
ENSNBRG00000013047puf60b9784.471ENSRNOG00000009960Puf607584.471Rattus_norvegicus
ENSNBRG00000013047puf60b9784.235ENSRBIG00000035274PUF608281.457Rhinopithecus_bieti
ENSNBRG00000013047puf60b9784.235ENSRROG00000029360PUF608381.938Rhinopithecus_roxellana
ENSNBRG00000013047puf60b9782.588ENSSBOG00000027089PUF607982.588Saimiri_boliviensis_boliviensis
ENSNBRG00000013047puf60b9784.235ENSSHAG00000006668PUF608184.235Sarcophilus_harrisii
ENSNBRG00000013047puf60b8591.553ENSSFOG00015019619puf60b8084.910Scleropages_formosus
ENSNBRG00000013047puf60b9188.608ENSSFOG00015019371puf60a8485.398Scleropages_formosus
ENSNBRG00000013047puf60b6899.317ENSSMAG00000016381puf60b5898.671Scophthalmus_maximus
ENSNBRG00000013047puf60b9697.968ENSSDUG00000009935puf60b8397.968Seriola_dumerili
ENSNBRG00000013047puf60b9783.055ENSSDUG00000007048-8381.778Seriola_dumerili
ENSNBRG00000013047puf60b9797.602ENSSLDG00000024011puf60b8397.494Seriola_lalandi_dorsalis
ENSNBRG00000013047puf60b9780.189ENSSLDG00000007366-8379.279Seriola_lalandi_dorsalis
ENSNBRG00000013047puf60b7778.466ENSSPUG00000013518PUF609278.466Sphenodon_punctatus
ENSNBRG00000013047puf60b9782.381ENSSPAG00000020285-8381.549Stegastes_partitus
ENSNBRG00000013047puf60b9696.854ENSSPAG00000012144puf60b8397.039Stegastes_partitus
ENSNBRG00000013047puf60b9784.235ENSSSCG00000038800PUF608277.704Sus_scrofa
ENSNBRG00000013047puf60b7861.688ENSTGUG00000016423-10094.872Taeniopygia_guttata
ENSNBRG00000013047puf60b9781.604ENSTGUG00000012797-8379.642Taeniopygia_guttata
ENSNBRG00000013047puf60b9777.273ENSTRUG00000008843-8275.286Takifugu_rubripes
ENSNBRG00000013047puf60b9795.444ENSTRUG00000005420puf60b8395.444Takifugu_rubripes
ENSNBRG00000013047puf60b9795.204ENSTNIG00000013675puf60b8393.213Tetraodon_nigroviridis
ENSNBRG00000013047puf60b9779.376ENSTNIG00000003069-8278.054Tetraodon_nigroviridis
ENSNBRG00000013047puf60b8163.758ENSTBEG00000001899-8464.430Tupaia_belangeri
ENSNBRG00000013047puf60b7285.223ENSTBEG00000002751-9785.223Tupaia_belangeri
ENSNBRG00000013047puf60b9782.824ENSTTRG00000017088PUF608380.995Tursiops_truncatus
ENSNBRG00000013047puf60b9784.235ENSUAMG00000024917PUF608281.236Ursus_americanus
ENSNBRG00000013047puf60b9282.793ENSUMAG00000000272PUF608782.544Ursus_maritimus
ENSNBRG00000013047puf60b9784.235ENSVVUG00000022527PUF608382.805Vulpes_vulpes
ENSNBRG00000013047puf60b9781.647ENSXETG00000012469puf608180.045Xenopus_tropicalis
ENSNBRG00000013047puf60b9793.285ENSXCOG00000012355puf60b8193.285Xiphophorus_couchianus
ENSNBRG00000013047puf60b9797.362ENSXMAG00000001862puf60b8395.413Xiphophorus_maculatus
ENSNBRG00000013047puf60b9777.327ENSXMAG00000010507-7877.327Xiphophorus_maculatus

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