EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000013127 (Gene tree)
Gene ID: 102787788
Gene Symbol: prpf8
Alias: id:ibd1257|ik:tdsubc_2a9|im:7141966|tdsubc_2a9|wu:fb37c02|wu:fb73e06|xx:tdsubc_2a9|zgc:56504
Full Name: pre-mRNA-processing-splicing factor 8-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 13619 bases
Position: chrJH422360.1:60833-74451
Accession: 102787788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000017120	RRM_4	PF10598.9	3e-48	1	1
ENSNBRP00000017120	U5_2-snRNA_bdg	PF10597.9	7.2e-74	1	1
ENSNBRP00000017120	PRO8NT	PF08082.11	1.8e-87	1	1
ENSNBRP00000017120	U6-snRNA_bdg	PF10596.9	1.8e-89	1	1
ENSNBRP00000017120	PROCN	PF08083.11	4.8e-236	1	1
ENSNBRP00000017120	PRP8_domainIV	PF12134.8	4.2e-130	1	1
ENSNBRP00000017120	PROCT	PF08084.11	3.1e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000017581	-	7053	XM_006802034	ENSNBRP00000017120	2350 (aa)	XP_006802097	UPI0003EC3813

Gene Model

Click here to download ENSNBRG00000013127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000013127's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000013127	prpf8	100	97.489	ENSG00000174231	PRPF8	100	97.489	Homo_sapiens
ENSNBRG00000013127	prpf8	100	99.021	ENSAPOG00000010079	prpf8	100	99.021	Acanthochromis_polyacanthus
ENSNBRG00000013127	prpf8	100	97.489	ENSAMEG00000007940	PRPF8	100	97.489	Ailuropoda_melanoleuca
ENSNBRG00000013127	prpf8	100	98.217	ENSACIG00000018280	prpf8	100	98.217	Amphilophus_citrinellus
ENSNBRG00000013127	prpf8	100	98.979	ENSAOCG00000010725	prpf8	100	98.979	Amphiprion_ocellaris
ENSNBRG00000013127	prpf8	100	98.979	ENSAPEG00000014397	prpf8	100	98.979	Amphiprion_percula
ENSNBRG00000013127	prpf8	100	98.298	ENSATEG00000010062	prpf8	100	98.298	Anabas_testudineus
ENSNBRG00000013127	prpf8	96	98.221	ENSAPLG00000010357	PRPF8	100	98.221	Anas_platyrhynchos
ENSNBRG00000013127	prpf8	82	96.193	ENSACAG00000014784	PRPF8	100	96.193	Anolis_carolinensis
ENSNBRG00000013127	prpf8	100	97.489	ENSANAG00000032629	PRPF8	100	97.489	Aotus_nancymaae
ENSNBRG00000013127	prpf8	100	99.957	ENSACLG00000020858	prpf8	100	99.957	Astatotilapia_calliptera
ENSNBRG00000013127	prpf8	100	98.383	ENSAMXG00000020291	prpf8	100	98.383	Astyanax_mexicanus
ENSNBRG00000013127	prpf8	100	97.489	ENSBTAG00000011488	PRPF8	100	97.489	Bos_taurus
ENSNBRG00000013127	prpf8	99	86.532	WBGene00004187	prp-8	99	86.981	Caenorhabditis_elegans
ENSNBRG00000013127	prpf8	100	97.489	ENSCJAG00000001911	PRPF8	100	97.489	Callithrix_jacchus
ENSNBRG00000013127	prpf8	100	97.489	ENSCAFG00000019221	PRPF8	100	97.489	Canis_familiaris
ENSNBRG00000013127	prpf8	95	98.349	ENSCAFG00020009943	PRPF8	100	98.349	Canis_lupus_dingo
ENSNBRG00000013127	prpf8	100	97.489	ENSCHIG00000017499	PRPF8	100	97.489	Capra_hircus
ENSNBRG00000013127	prpf8	100	97.489	ENSTSYG00000014120	PRPF8	100	97.489	Carlito_syrichta
ENSNBRG00000013127	prpf8	96	96.125	ENSCAPG00000009459	PRPF8	99	96.125	Cavia_aperea
ENSNBRG00000013127	prpf8	100	97.489	ENSCPOG00000010379	PRPF8	100	97.489	Cavia_porcellus
ENSNBRG00000013127	prpf8	100	97.489	ENSCCAG00000031983	-	100	97.489	Cebus_capucinus
ENSNBRG00000013127	prpf8	100	97.489	ENSCATG00000038595	PRPF8	100	97.489	Cercocebus_atys
ENSNBRG00000013127	prpf8	100	97.489	ENSCLAG00000004388	PRPF8	100	97.489	Chinchilla_lanigera
ENSNBRG00000013127	prpf8	100	97.489	ENSCSAG00000013929	PRPF8	100	97.489	Chlorocebus_sabaeus
ENSNBRG00000013127	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	88	97.333	Choloepus_hoffmanni
ENSNBRG00000013127	prpf8	100	97.404	ENSCPBG00000020409	PRPF8	100	97.404	Chrysemys_picta_bellii
ENSNBRG00000013127	prpf8	98	92.993	ENSCSAVG00000007825	-	100	91.366	Ciona_savignyi
ENSNBRG00000013127	prpf8	100	97.489	ENSCANG00000043088	PRPF8	100	97.489	Colobus_angolensis_palliatus
ENSNBRG00000013127	prpf8	73	99.213	ENSCGRG00000005129	Prpf8	100	99.213	Cricetulus_griseus_crigri
ENSNBRG00000013127	prpf8	100	98.596	ENSCSEG00000007905	prpf8	100	98.596	Cynoglossus_semilaevis
ENSNBRG00000013127	prpf8	100	98.596	ENSDARG00000026180	prpf8	100	98.596	Danio_rerio
ENSNBRG00000013127	prpf8	93	97.577	ENSDNOG00000018471	PRPF8	99	97.577	Dasypus_novemcinctus
ENSNBRG00000013127	prpf8	84	96.067	ENSDORG00000006185	Prpf8	96	96.067	Dipodomys_ordii
ENSNBRG00000013127	prpf8	99	91.438	FBgn0033688	Prp8	97	91.965	Drosophila_melanogaster
ENSNBRG00000013127	prpf8	100	92.170	ENSETEG00000017592	PRPF8	100	92.170	Echinops_telfairi
ENSNBRG00000013127	prpf8	99	93.319	ENSEBUG00000006548	prpf8	99	93.319	Eptatretus_burgeri
ENSNBRG00000013127	prpf8	100	97.489	ENSEASG00005009514	PRPF8	99	98.581	Equus_asinus_asinus
ENSNBRG00000013127	prpf8	97	98.374	ENSECAG00000021318	PRPF8	100	98.374	Equus_caballus
ENSNBRG00000013127	prpf8	67	98.519	ENSEEUG00000012120	-	67	98.519	Erinaceus_europaeus
ENSNBRG00000013127	prpf8	98	97.304	ENSELUG00000007120	prpf8	99	97.304	Esox_lucius
ENSNBRG00000013127	prpf8	100	97.489	ENSFCAG00000006297	PRPF8	100	97.489	Felis_catus
ENSNBRG00000013127	prpf8	100	97.404	ENSFALG00000006628	PRPF8	100	97.404	Ficedula_albicollis
ENSNBRG00000013127	prpf8	100	97.489	ENSFDAG00000004711	PRPF8	100	97.489	Fukomys_damarensis
ENSNBRG00000013127	prpf8	100	98.426	ENSFHEG00000021084	prpf8	100	98.426	Fundulus_heteroclitus
ENSNBRG00000013127	prpf8	100	96.170	ENSGMOG00000002028	prpf8	99	96.170	Gadus_morhua
ENSNBRG00000013127	prpf8	100	97.532	ENSGALG00000002943	PRPF8	100	97.532	Gallus_gallus
ENSNBRG00000013127	prpf8	99	98.719	ENSGAFG00000010337	prpf8	99	98.719	Gambusia_affinis
ENSNBRG00000013127	prpf8	100	98.638	ENSGACG00000008504	prpf8	100	98.506	Gasterosteus_aculeatus
ENSNBRG00000013127	prpf8	100	97.532	ENSGAGG00000008350	PRPF8	100	97.532	Gopherus_agassizii
ENSNBRG00000013127	prpf8	100	97.489	ENSGGOG00000005516	PRPF8	100	97.489	Gorilla_gorilla
ENSNBRG00000013127	prpf8	100	99.277	ENSHBUG00000016192	prpf8	100	99.277	Haplochromis_burtoni
ENSNBRG00000013127	prpf8	100	97.489	ENSHGLG00000012029	PRPF8	100	97.489	Heterocephalus_glaber_female
ENSNBRG00000013127	prpf8	100	97.489	ENSHGLG00100016494	PRPF8	100	97.489	Heterocephalus_glaber_male
ENSNBRG00000013127	prpf8	100	98.511	ENSHCOG00000016414	prpf8	100	98.511	Hippocampus_comes
ENSNBRG00000013127	prpf8	100	98.340	ENSIPUG00000023230	prpf8	100	98.340	Ictalurus_punctatus
ENSNBRG00000013127	prpf8	100	97.489	ENSSTOG00000005128	PRPF8	100	97.489	Ictidomys_tridecemlineatus
ENSNBRG00000013127	prpf8	100	95.362	ENSJJAG00000021159	Prpf8	100	95.362	Jaculus_jaculus
ENSNBRG00000013127	prpf8	99	98.804	ENSKMAG00000016118	prpf8	100	98.804	Kryptolebias_marmoratus
ENSNBRG00000013127	prpf8	100	98.553	ENSLBEG00000026903	prpf8	100	98.553	Labrus_bergylta
ENSNBRG00000013127	prpf8	95	95.157	ENSLACG00000010479	PRPF8	99	98.261	Latimeria_chalumnae
ENSNBRG00000013127	prpf8	99	98.086	ENSLOCG00000005409	prpf8	99	98.086	Lepisosteus_oculatus
ENSNBRG00000013127	prpf8	100	97.489	ENSLAFG00000015445	PRPF8	100	97.489	Loxodonta_africana
ENSNBRG00000013127	prpf8	100	97.489	ENSMFAG00000039995	PRPF8	100	97.489	Macaca_fascicularis
ENSNBRG00000013127	prpf8	100	97.489	ENSMMUG00000004820	PRPF8	100	97.489	Macaca_mulatta
ENSNBRG00000013127	prpf8	100	97.489	ENSMNEG00000035713	PRPF8	100	97.489	Macaca_nemestrina
ENSNBRG00000013127	prpf8	100	97.489	ENSMLEG00000037937	PRPF8	100	97.489	Mandrillus_leucophaeus
ENSNBRG00000013127	prpf8	100	98.851	ENSMAMG00000008919	prpf8	100	98.851	Mastacembelus_armatus
ENSNBRG00000013127	prpf8	100	99.957	ENSMZEG00005015073	prpf8	100	99.957	Maylandia_zebra
ENSNBRG00000013127	prpf8	100	97.532	ENSMGAG00000004769	PRPF8	100	97.532	Meleagris_gallopavo
ENSNBRG00000013127	prpf8	100	97.489	ENSMICG00000010320	PRPF8	100	97.489	Microcebus_murinus
ENSNBRG00000013127	prpf8	100	97.489	ENSMOCG00000016838	Prpf8	100	97.489	Microtus_ochrogaster
ENSNBRG00000013127	prpf8	100	98.340	ENSMMOG00000011887	prpf8	100	98.340	Mola_mola
ENSNBRG00000013127	prpf8	100	97.404	ENSMODG00000010480	PRPF8	100	97.404	Monodelphis_domestica
ENSNBRG00000013127	prpf8	97	98.445	ENSMALG00000003558	prpf8	100	98.445	Monopterus_albus
ENSNBRG00000013127	prpf8	100	97.447	MGP_CAROLIEiJ_G0016740	Prpf8	100	97.447	Mus_caroli
ENSNBRG00000013127	prpf8	100	97.447	ENSMUSG00000020850	Prpf8	100	97.447	Mus_musculus
ENSNBRG00000013127	prpf8	100	97.404	MGP_PahariEiJ_G0017877	Prpf8	100	97.404	Mus_pahari
ENSNBRG00000013127	prpf8	100	97.447	MGP_SPRETEiJ_G0017583	Prpf8	100	97.447	Mus_spretus
ENSNBRG00000013127	prpf8	100	97.489	ENSMPUG00000013227	PRPF8	100	97.489	Mustela_putorius_furo
ENSNBRG00000013127	prpf8	100	97.365	ENSMLUG00000002666	PRPF8	100	97.365	Myotis_lucifugus
ENSNBRG00000013127	prpf8	100	95.745	ENSNGAG00000005305	Prpf8	100	95.745	Nannospalax_galili
ENSNBRG00000013127	prpf8	97	96.760	ENSNLEG00000000897	PRPF8	98	96.760	Nomascus_leucogenys
ENSNBRG00000013127	prpf8	98	96.436	ENSMEUG00000015999	PRPF8	100	96.436	Notamacropus_eugenii
ENSNBRG00000013127	prpf8	100	95.745	ENSOPRG00000003102	PRPF8	100	95.327	Ochotona_princeps
ENSNBRG00000013127	prpf8	100	97.489	ENSODEG00000008468	PRPF8	100	97.489	Octodon_degus
ENSNBRG00000013127	prpf8	100	99.915	ENSONIG00000008153	prpf8	100	99.915	Oreochromis_niloticus
ENSNBRG00000013127	prpf8	81	99.065	ENSOANG00000004250	PRPF8	97	99.065	Ornithorhynchus_anatinus
ENSNBRG00000013127	prpf8	100	97.489	ENSOCUG00000000081	PRPF8	100	97.489	Oryctolagus_cuniculus
ENSNBRG00000013127	prpf8	100	98.683	ENSORLG00000008036	prpf8	100	98.932	Oryzias_latipes
ENSNBRG00000013127	prpf8	100	98.641	ENSORLG00020021070	prpf8	100	98.641	Oryzias_latipes_hni
ENSNBRG00000013127	prpf8	100	98.683	ENSORLG00015002340	prpf8	100	98.683	Oryzias_latipes_hsok
ENSNBRG00000013127	prpf8	100	97.239	ENSOMEG00000016866	prpf8	100	97.239	Oryzias_melastigma
ENSNBRG00000013127	prpf8	100	97.365	ENSOARG00000013312	PRPF8	100	97.365	Ovis_aries
ENSNBRG00000013127	prpf8	100	97.489	ENSPPAG00000042753	PRPF8	100	97.489	Pan_paniscus
ENSNBRG00000013127	prpf8	100	97.489	ENSPPRG00000008746	PRPF8	100	97.489	Panthera_pardus
ENSNBRG00000013127	prpf8	100	97.404	ENSPTIG00000019200	PRPF8	100	97.404	Panthera_tigris_altaica
ENSNBRG00000013127	prpf8	100	97.489	ENSPTRG00000039576	PRPF8	100	97.489	Pan_troglodytes
ENSNBRG00000013127	prpf8	98	98.349	ENSPANG00000024607	PRPF8	98	98.349	Papio_anubis
ENSNBRG00000013127	prpf8	100	98.638	ENSPKIG00000011201	prpf8	100	98.638	Paramormyrops_kingsleyae
ENSNBRG00000013127	prpf8	100	97.362	ENSPSIG00000013393	PRPF8	100	97.362	Pelodiscus_sinensis
ENSNBRG00000013127	prpf8	100	97.489	ENSPEMG00000021699	Prpf8	100	97.489	Peromyscus_maniculatus_bairdii
ENSNBRG00000013127	prpf8	96	93.898	ENSPMAG00000005438	prpf8	100	93.942	Petromyzon_marinus
ENSNBRG00000013127	prpf8	100	97.404	ENSPCIG00000022603	PRPF8	100	98.260	Phascolarctos_cinereus
ENSNBRG00000013127	prpf8	100	98.685	ENSPFOG00000007005	prpf8	100	98.685	Poecilia_formosa
ENSNBRG00000013127	prpf8	100	96.936	ENSPLAG00000020777	prpf8	100	96.936	Poecilia_latipinna
ENSNBRG00000013127	prpf8	100	98.685	ENSPMEG00000004051	prpf8	100	98.685	Poecilia_mexicana
ENSNBRG00000013127	prpf8	100	98.601	ENSPREG00000021902	prpf8	100	98.601	Poecilia_reticulata
ENSNBRG00000013127	prpf8	100	97.489	ENSPPYG00000007777	PRPF8	100	97.489	Pongo_abelii
ENSNBRG00000013127	prpf8	90	97.030	ENSPCAG00000008938	PRPF8	90	97.030	Procavia_capensis
ENSNBRG00000013127	prpf8	100	97.489	ENSPCOG00000015182	PRPF8	100	97.489	Propithecus_coquereli
ENSNBRG00000013127	prpf8	93	98.559	ENSPVAG00000002134	PRPF8	93	98.559	Pteropus_vampyrus
ENSNBRG00000013127	prpf8	100	99.277	ENSPNYG00000016356	prpf8	100	99.277	Pundamilia_nyererei
ENSNBRG00000013127	prpf8	100	98.426	ENSPNAG00000009247	prpf8	100	98.426	Pygocentrus_nattereri
ENSNBRG00000013127	prpf8	100	97.447	ENSRNOG00000003495	Prpf8	100	97.447	Rattus_norvegicus
ENSNBRG00000013127	prpf8	100	97.489	ENSRBIG00000031219	PRPF8	100	97.903	Rhinopithecus_bieti
ENSNBRG00000013127	prpf8	100	97.489	ENSRROG00000038014	PRPF8	100	97.903	Rhinopithecus_roxellana
ENSNBRG00000013127	prpf8	98	62.473	YHR165C	PRP8	95	62.516	Saccharomyces_cerevisiae
ENSNBRG00000013127	prpf8	100	97.489	ENSSBOG00000029717	PRPF8	100	97.489	Saimiri_boliviensis_boliviensis
ENSNBRG00000013127	prpf8	100	97.362	ENSSHAG00000006167	PRPF8	100	97.362	Sarcophilus_harrisii
ENSNBRG00000013127	prpf8	100	98.383	ENSSFOG00015013905	prpf8	100	98.383	Scleropages_formosus
ENSNBRG00000013127	prpf8	100	98.638	ENSSMAG00000017736	prpf8	100	98.638	Scophthalmus_maximus
ENSNBRG00000013127	prpf8	100	98.979	ENSSDUG00000003029	prpf8	100	98.979	Seriola_dumerili
ENSNBRG00000013127	prpf8	68	99.812	ENSSLDG00000017096	prpf8	100	99.812	Seriola_lalandi_dorsalis
ENSNBRG00000013127	prpf8	87	94.553	ENSSARG00000002892	PRPF8	87	94.553	Sorex_araneus
ENSNBRG00000013127	prpf8	100	97.362	ENSSPUG00000007463	PRPF8	100	97.362	Sphenodon_punctatus
ENSNBRG00000013127	prpf8	100	98.426	ENSSPAG00000015639	prpf8	100	98.426	Stegastes_partitus
ENSNBRG00000013127	prpf8	100	97.489	ENSSSCG00000017817	PRPF8	100	97.489	Sus_scrofa
ENSNBRG00000013127	prpf8	100	97.404	ENSTGUG00000005648	-	100	97.404	Taeniopygia_guttata
ENSNBRG00000013127	prpf8	51	98.778	ENSTGUG00000015597	-	95	98.778	Taeniopygia_guttata
ENSNBRG00000013127	prpf8	100	98.511	ENSTRUG00000015906	prpf8	100	98.511	Takifugu_rubripes
ENSNBRG00000013127	prpf8	95	99.582	ENSTNIG00000003460	prpf8	99	99.582	Tetraodon_nigroviridis
ENSNBRG00000013127	prpf8	93	98.911	ENSTBEG00000006431	PRPF8	93	98.911	Tupaia_belangeri
ENSNBRG00000013127	prpf8	100	96.936	ENSTTRG00000006869	PRPF8	100	96.936	Tursiops_truncatus
ENSNBRG00000013127	prpf8	54	96.154	ENSUAMG00000015644	-	96	96.154	Ursus_americanus
ENSNBRG00000013127	prpf8	100	97.234	ENSUMAG00000009385	PRPF8	100	97.234	Ursus_maritimus
ENSNBRG00000013127	prpf8	71	98.621	ENSVPAG00000006063	-	71	98.621	Vicugna_pacos
ENSNBRG00000013127	prpf8	100	97.489	ENSVVUG00000021695	PRPF8	99	97.489	Vulpes_vulpes
ENSNBRG00000013127	prpf8	100	97.278	ENSXETG00000022259	prpf8	100	97.278	Xenopus_tropicalis
ENSNBRG00000013127	prpf8	100	98.511	ENSXCOG00000012775	prpf8	100	98.511	Xiphophorus_couchianus
ENSNBRG00000013127	prpf8	100	98.468	ENSXMAG00000008505	prpf8	100	98.468	Xiphophorus_maculatus