EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000013202 (Gene tree)
Gene ID: -
Gene Symbol: lrpprc
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine-rich PPR motif-containing protein%2C mitochondrial-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 57939 bases
Position: chrJH422278.1:8333906-8391844
Accession: 102780371
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000017258	PPR	PF01535.20	1.6e-26	1	5
ENSNBRP00000017258	PPR	PF01535.20	1.6e-26	2	5
ENSNBRP00000017258	PPR	PF01535.20	1.6e-26	3	5
ENSNBRP00000017258	PPR	PF01535.20	1.6e-26	4	5
ENSNBRP00000017258	PPR	PF01535.20	1.6e-26	5	5
ENSNBRP00000017179	PPR	PF01535.20	1.2e-15	1	3
ENSNBRP00000017179	PPR	PF01535.20	1.2e-15	2	3
ENSNBRP00000017179	PPR	PF01535.20	1.2e-15	3	3
ENSNBRP00000017185	PPR	PF01535.20	1.2e-15	1	3
ENSNBRP00000017185	PPR	PF01535.20	1.2e-15	2	3
ENSNBRP00000017185	PPR	PF01535.20	1.2e-15	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000017642	-	1455	-	ENSNBRP00000017179	484 (aa)	-	-
ENSNBRT00000017724	-	3618	XM_006783616	ENSNBRP00000017258	1205 (aa)	XP_006783679	-
ENSNBRT00000017649	-	1479	-	ENSNBRP00000017185	492 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000013202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000013202's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000013202	lrpprc	92	79.915	ENSAPOG00000016610	lrpprc	94	71.238	Acanthochromis_polyacanthus
ENSNBRG00000013202	lrpprc	93	58.315	ENSAMEG00000005852	LRPPRC	99	48.980	Ailuropoda_melanoleuca
ENSNBRG00000013202	lrpprc	100	78.264	ENSACIG00000009604	lrpprc	93	77.527	Amphilophus_citrinellus
ENSNBRG00000013202	lrpprc	92	80.973	ENSAOCG00000005886	lrpprc	94	72.115	Amphiprion_ocellaris
ENSNBRG00000013202	lrpprc	100	75.731	ENSAPEG00000002937	lrpprc	95	75.731	Amphiprion_percula
ENSNBRG00000013202	lrpprc	92	78.747	ENSATEG00000010555	lrpprc	97	77.925	Anabas_testudineus
ENSNBRG00000013202	lrpprc	99	53.523	ENSACAG00000029278	LRPPRC	95	53.523	Anolis_carolinensis
ENSNBRG00000013202	lrpprc	98	56.972	ENSANAG00000027440	LRPPRC	86	59.698	Aotus_nancymaae
ENSNBRG00000013202	lrpprc	100	90.838	ENSACLG00000023712	lrpprc	100	89.087	Astatotilapia_calliptera
ENSNBRG00000013202	lrpprc	98	59.646	ENSAMXG00000004245	-	96	59.646	Astyanax_mexicanus
ENSNBRG00000013202	lrpprc	99	60.000	ENSCJAG00000000794	LRPPRC	90	60.000	Callithrix_jacchus
ENSNBRG00000013202	lrpprc	99	58.294	ENSCHIG00000020173	LRPPRC	90	58.294	Capra_hircus
ENSNBRG00000013202	lrpprc	99	43.165	ENSCAPG00000013631	LRPPRC	97	43.165	Cavia_aperea
ENSNBRG00000013202	lrpprc	90	47.025	ENSCPOG00000000204	LRPPRC	99	47.025	Cavia_porcellus
ENSNBRG00000013202	lrpprc	99	61.005	ENSCCAG00000031900	LRPPRC	90	61.005	Cebus_capucinus
ENSNBRG00000013202	lrpprc	99	60.000	ENSCATG00000014187	LRPPRC	87	60.000	Cercocebus_atys
ENSNBRG00000013202	lrpprc	99	48.260	ENSCLAG00000005203	LRPPRC	94	48.260	Chinchilla_lanigera
ENSNBRG00000013202	lrpprc	98	55.511	ENSCSAG00000013233	LRPPRC	94	45.352	Chlorocebus_sabaeus
ENSNBRG00000013202	lrpprc	98	54.871	ENSCHOG00000003631	LRPPRC	75	58.080	Choloepus_hoffmanni
ENSNBRG00000013202	lrpprc	92	57.511	ENSCANG00000034961	LRPPRC	99	64.912	Colobus_angolensis_palliatus
ENSNBRG00000013202	lrpprc	99	57.109	ENSCGRG00001016261	Lrpprc	90	57.109	Cricetulus_griseus_chok1gshd
ENSNBRG00000013202	lrpprc	99	57.109	ENSCGRG00000004072	Lrpprc	90	57.109	Cricetulus_griseus_crigri
ENSNBRG00000013202	lrpprc	92	62.611	ENSCSEG00000003850	lrpprc	89	62.611	Cynoglossus_semilaevis
ENSNBRG00000013202	lrpprc	92	79.915	ENSCVAG00000012967	lrpprc	94	71.791	Cyprinodon_variegatus
ENSNBRG00000013202	lrpprc	92	63.750	ENSDARG00000043970	lrpprc	92	55.060	Danio_rerio
ENSNBRG00000013202	lrpprc	98	54.600	ENSDNOG00000012594	-	94	49.848	Dasypus_novemcinctus
ENSNBRG00000013202	lrpprc	92	50.000	ENSDNOG00000032336	-	93	40.377	Dasypus_novemcinctus
ENSNBRG00000013202	lrpprc	98	56.287	ENSDORG00000012233	Lrpprc	94	49.886	Dipodomys_ordii
ENSNBRG00000013202	lrpprc	99	48.524	ENSETEG00000006657	LRPPRC	95	48.524	Echinops_telfairi
ENSNBRG00000013202	lrpprc	92	52.242	ENSEEUG00000012340	LRPPRC	78	53.316	Erinaceus_europaeus
ENSNBRG00000013202	lrpprc	99	61.893	ENSELUG00000012803	lrpprc	97	61.893	Esox_lucius
ENSNBRG00000013202	lrpprc	92	60.087	ENSFCAG00000013468	LRPPRC	94	50.642	Felis_catus
ENSNBRG00000013202	lrpprc	99	55.765	ENSFALG00000012738	LRPPRC	93	55.765	Ficedula_albicollis
ENSNBRG00000013202	lrpprc	99	47.843	ENSFDAG00000015328	LRPPRC	94	47.843	Fukomys_damarensis
ENSNBRG00000013202	lrpprc	100	70.149	ENSFHEG00000019604	lrpprc	94	70.149	Fundulus_heteroclitus
ENSNBRG00000013202	lrpprc	92	74.777	ENSGMOG00000008337	lrpprc	95	61.474	Gadus_morhua
ENSNBRG00000013202	lrpprc	92	78.224	ENSGAFG00000001455	lrpprc	94	68.084	Gambusia_affinis
ENSNBRG00000013202	lrpprc	92	81.441	ENSGACG00000010679	lrpprc	99	67.064	Gasterosteus_aculeatus
ENSNBRG00000013202	lrpprc	83	61.881	ENSGGOG00000041704	-	99	61.881	Gorilla_gorilla
ENSNBRG00000013202	lrpprc	100	85.351	ENSHBUG00000000393	lrpprc	92	85.202	Haplochromis_burtoni
ENSNBRG00000013202	lrpprc	98	52.079	ENSHGLG00000006123	LRPPRC	94	48.055	Heterocephalus_glaber_female
ENSNBRG00000013202	lrpprc	64	47.222	ENSHGLG00100005960	-	99	47.222	Heterocephalus_glaber_male
ENSNBRG00000013202	lrpprc	97	75.467	ENSHCOG00000002107	lrpprc	89	75.467	Hippocampus_comes
ENSNBRG00000013202	lrpprc	98	64.648	ENSIPUG00000009406	lrpprc	93	57.522	Ictalurus_punctatus
ENSNBRG00000013202	lrpprc	98	55.357	ENSSTOG00000011185	LRPPRC	94	49.584	Ictidomys_tridecemlineatus
ENSNBRG00000013202	lrpprc	99	56.161	ENSJJAG00000020475	Lrpprc	90	56.161	Jaculus_jaculus
ENSNBRG00000013202	lrpprc	100	59.492	ENSKMAG00000003287	lrpprc	81	59.492	Kryptolebias_marmoratus
ENSNBRG00000013202	lrpprc	92	78.444	ENSLBEG00000023225	lrpprc	88	78.492	Labrus_bergylta
ENSNBRG00000013202	lrpprc	92	63.907	ENSLACG00000014030	LRPPRC	94	55.249	Latimeria_chalumnae
ENSNBRG00000013202	lrpprc	92	65.975	ENSLOCG00000016390	lrpprc	90	58.215	Lepisosteus_oculatus
ENSNBRG00000013202	lrpprc	99	56.471	ENSLAFG00000008614	LRPPRC	90	56.471	Loxodonta_africana
ENSNBRG00000013202	lrpprc	99	59.762	ENSMFAG00000041560	LRPPRC	99	51.045	Macaca_fascicularis
ENSNBRG00000013202	lrpprc	87	60.829	ENSMMUG00000019841	LRPPRC	99	50.299	Macaca_mulatta
ENSNBRG00000013202	lrpprc	99	59.524	ENSMNEG00000031613	LRPPRC	90	59.524	Macaca_nemestrina
ENSNBRG00000013202	lrpprc	92	78.194	ENSMAMG00000021835	lrpprc	93	67.237	Mastacembelus_armatus
ENSNBRG00000013202	lrpprc	100	85.022	ENSMZEG00005027379	lrpprc	94	84.873	Maylandia_zebra
ENSNBRG00000013202	lrpprc	99	56.335	ENSMAUG00000012118	Lrpprc	97	48.663	Mesocricetus_auratus
ENSNBRG00000013202	lrpprc	92	58.134	ENSMICG00000010486	LRPPRC	86	58.134	Microcebus_murinus
ENSNBRG00000013202	lrpprc	92	57.576	ENSMOCG00000006048	Lrpprc	94	49.502	Microtus_ochrogaster
ENSNBRG00000013202	lrpprc	100	72.809	ENSMMOG00000007830	lrpprc	94	72.809	Mola_mola
ENSNBRG00000013202	lrpprc	99	53.386	ENSMODG00000000648	LRPPRC	97	53.386	Monodelphis_domestica
ENSNBRG00000013202	lrpprc	92	73.573	ENSMALG00000001271	lrpprc	93	64.093	Monopterus_albus
ENSNBRG00000013202	lrpprc	99	60.465	ENSMPUG00000011800	LRPPRC	90	60.465	Mustela_putorius_furo
ENSNBRG00000013202	lrpprc	98	54.365	ENSMLUG00000010575	LRPPRC	94	49.886	Myotis_lucifugus
ENSNBRG00000013202	lrpprc	99	57.820	ENSNGAG00000013069	Lrpprc	90	57.820	Nannospalax_galili
ENSNBRG00000013202	lrpprc	98	55.600	ENSNLEG00000016782	LRPPRC	86	58.442	Nomascus_leucogenys
ENSNBRG00000013202	lrpprc	86	68.421	ENSOPRG00000016774	LRPPRC	79	68.421	Ochotona_princeps
ENSNBRG00000013202	lrpprc	98	54.000	ENSODEG00000011211	LRPPRC	94	48.710	Octodon_degus
ENSNBRG00000013202	lrpprc	100	84.203	ENSONIG00000000917	lrpprc	95	83.258	Oreochromis_niloticus
ENSNBRG00000013202	lrpprc	53	49.811	ENSOANG00000014670	-	100	44.980	Ornithorhynchus_anatinus
ENSNBRG00000013202	lrpprc	98	54.635	ENSOCUG00000015046	LRPPRC	90	50.378	Oryctolagus_cuniculus
ENSNBRG00000013202	lrpprc	92	78.936	ENSORLG00000004605	lrpprc	97	69.976	Oryzias_latipes
ENSNBRG00000013202	lrpprc	97	68.462	ENSORLG00020012536	lrpprc	99	67.729	Oryzias_latipes_hni
ENSNBRG00000013202	lrpprc	92	81.879	ENSORLG00015018270	lrpprc	86	81.879	Oryzias_latipes_hsok
ENSNBRG00000013202	lrpprc	92	79.560	ENSOMEG00000011863	-	90	79.560	Oryzias_melastigma
ENSNBRG00000013202	lrpprc	99	50.114	ENSOGAG00000012798	LRPPRC	94	50.114	Otolemur_garnettii
ENSNBRG00000013202	lrpprc	99	49.887	ENSOARG00000006522	LRPPRC	94	49.887	Ovis_aries
ENSNBRG00000013202	lrpprc	99	58.294	ENSPPAG00000040876	LRPPRC	90	58.531	Pan_paniscus
ENSNBRG00000013202	lrpprc	92	60.087	ENSPPRG00000006578	LRPPRC	94	50.606	Panthera_pardus
ENSNBRG00000013202	lrpprc	87	63.208	ENSPTIG00000000933	LRPPRC	94	50.567	Panthera_tigris_altaica
ENSNBRG00000013202	lrpprc	99	58.531	ENSPTRG00000011880	LRPPRC	90	58.531	Pan_troglodytes
ENSNBRG00000013202	lrpprc	99	59.524	ENSPANG00000020731	LRPPRC	87	59.524	Papio_anubis
ENSNBRG00000013202	lrpprc	99	53.809	ENSPKIG00000022232	lrpprc	91	58.849	Paramormyrops_kingsleyae
ENSNBRG00000013202	lrpprc	65	52.313	ENSPSIG00000006830	-	96	53.262	Pelodiscus_sinensis
ENSNBRG00000013202	lrpprc	93	74.946	ENSPMGG00000013171	-	95	75.378	Periophthalmus_magnuspinnatus
ENSNBRG00000013202	lrpprc	70	65.912	ENSPMGG00000016597	lrpprc	99	65.912	Periophthalmus_magnuspinnatus
ENSNBRG00000013202	lrpprc	99	42.976	ENSPMAG00000002147	lrpprc	100	42.976	Petromyzon_marinus
ENSNBRG00000013202	lrpprc	92	76.744	ENSPFOG00000011227	lrpprc	96	68.015	Poecilia_formosa
ENSNBRG00000013202	lrpprc	92	76.956	ENSPLAG00000004018	lrpprc	94	68.141	Poecilia_latipinna
ENSNBRG00000013202	lrpprc	92	76.956	ENSPMEG00000016425	lrpprc	94	67.841	Poecilia_mexicana
ENSNBRG00000013202	lrpprc	92	76.533	ENSPREG00000003662	lrpprc	93	68.230	Poecilia_reticulata
ENSNBRG00000013202	lrpprc	62	46.106	ENSPPYG00000029532	-	100	46.106	Pongo_abelii
ENSNBRG00000013202	lrpprc	98	55.000	ENSPCAG00000001430	LRPPRC	73	59.016	Procavia_capensis
ENSNBRG00000013202	lrpprc	99	59.953	ENSPVAG00000002007	LRPPRC	90	59.953	Pteropus_vampyrus
ENSNBRG00000013202	lrpprc	100	91.020	ENSPNYG00000000756	lrpprc	94	91.020	Pundamilia_nyererei
ENSNBRG00000013202	lrpprc	92	69.492	ENSPNAG00000002895	lrpprc	94	61.584	Pygocentrus_nattereri
ENSNBRG00000013202	lrpprc	99	56.250	ENSRNOG00000005877	Lrpprc	90	56.250	Rattus_norvegicus
ENSNBRG00000013202	lrpprc	99	59.048	ENSRBIG00000031552	LRPPRC	89	59.286	Rhinopithecus_bieti
ENSNBRG00000013202	lrpprc	98	55.311	ENSRROG00000042793	-	86	58.874	Rhinopithecus_roxellana
ENSNBRG00000013202	lrpprc	98	56.773	ENSSBOG00000011807	LRPPRC	86	59.483	Saimiri_boliviensis_boliviensis
ENSNBRG00000013202	lrpprc	99	57.710	ENSSHAG00000018725	LRPPRC	93	57.710	Sarcophilus_harrisii
ENSNBRG00000013202	lrpprc	92	60.254	ENSSFOG00015001042	lrpprc	93	52.244	Scleropages_formosus
ENSNBRG00000013202	lrpprc	92	70.575	ENSSMAG00000016811	-	91	70.575	Scophthalmus_maximus
ENSNBRG00000013202	lrpprc	92	76.483	ENSSDUG00000019062	lrpprc	94	68.307	Seriola_dumerili
ENSNBRG00000013202	lrpprc	100	65.703	ENSSLDG00000023028	lrpprc	95	66.024	Seriola_lalandi_dorsalis
ENSNBRG00000013202	lrpprc	86	58.639	ENSSARG00000000426	LRPPRC	90	58.639	Sorex_araneus
ENSNBRG00000013202	lrpprc	92	73.150	ENSSPAG00000000162	lrpprc	92	72.158	Stegastes_partitus
ENSNBRG00000013202	lrpprc	98	54.545	ENSSSCG00000008452	LRPPRC	94	49.169	Sus_scrofa
ENSNBRG00000013202	lrpprc	99	46.347	ENSTGUG00000003759	LRPPRC	100	46.347	Taeniopygia_guttata
ENSNBRG00000013202	lrpprc	92	76.160	ENSTRUG00000008409	lrpprc	90	67.137	Takifugu_rubripes
ENSNBRG00000013202	lrpprc	92	75.274	ENSTNIG00000007470	lrpprc	99	65.101	Tetraodon_nigroviridis
ENSNBRG00000013202	lrpprc	98	56.699	ENSTTRG00000006403	LRPPRC	89	56.699	Tursiops_truncatus
ENSNBRG00000013202	lrpprc	95	59.843	ENSVPAG00000008993	LRPPRC	90	59.843	Vicugna_pacos
ENSNBRG00000013202	lrpprc	99	63.232	ENSXETG00000009296	lrpprc	96	53.547	Xenopus_tropicalis
ENSNBRG00000013202	lrpprc	92	76.233	ENSXCOG00000013343	lrpprc	89	75.283	Xiphophorus_couchianus
ENSNBRG00000013202	lrpprc	92	76.321	ENSXMAG00000018108	lrpprc	94	67.636	Xiphophorus_maculatus