EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000013370 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.3
Alias: -
Full Name: si:ch211-153b23.3
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 3569 bases
Position: chrJH422275.1:8778834-8782402
Accession: ZDB-GENE-141216-408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000017313	Sua5_yciO_yrdC	PF01300.18	2.2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000017779	-	2631	-	ENSNBRP00000017313	877 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000013370's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000013370's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000013370	si:ch211-153b23.3	59	33.272	ENSNBRG00000013392	si:ch211-153b23.4	65	33.272

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000013370	si:ch211-153b23.3	58	31.923	ENSAPOG00000006144	si:ch211-153b23.4	60	31.923	Acanthochromis_polyacanthus
ENSNBRG00000013370	si:ch211-153b23.3	58	31.923	ENSAPOG00000006178	si:ch211-153b23.4	59	31.923	Acanthochromis_polyacanthus
ENSNBRG00000013370	si:ch211-153b23.3	100	73.068	ENSACIG00000006968	si:ch211-153b23.3	100	72.955	Amphilophus_citrinellus
ENSNBRG00000013370	si:ch211-153b23.3	56	31.213	ENSAOCG00000010999	si:ch211-153b23.4	61	31.213	Amphiprion_ocellaris
ENSNBRG00000013370	si:ch211-153b23.3	100	82.366	ENSAOCG00000010974	si:ch211-153b23.3	100	82.366	Amphiprion_ocellaris
ENSNBRG00000013370	si:ch211-153b23.3	100	82.594	ENSAPEG00000014700	si:ch211-153b23.3	100	82.594	Amphiprion_percula
ENSNBRG00000013370	si:ch211-153b23.3	56	31.890	ENSAPEG00000014665	si:ch211-153b23.4	60	31.890	Amphiprion_percula
ENSNBRG00000013370	si:ch211-153b23.3	100	81.087	ENSATEG00000004956	si:ch211-153b23.3	99	81.087	Anabas_testudineus
ENSNBRG00000013370	si:ch211-153b23.3	57	32.314	ENSATEG00000004948	si:ch211-153b23.4	59	32.314	Anabas_testudineus
ENSNBRG00000013370	si:ch211-153b23.3	59	33.952	ENSACLG00000005471	si:ch211-153b23.4	58	33.640	Astatotilapia_calliptera
ENSNBRG00000013370	si:ch211-153b23.3	100	98.974	ENSACLG00000005894	si:ch211-153b23.3	100	98.974	Astatotilapia_calliptera
ENSNBRG00000013370	si:ch211-153b23.3	59	32.584	ENSAMXG00000013879	si:ch211-153b23.4	61	32.584	Astyanax_mexicanus
ENSNBRG00000013370	si:ch211-153b23.3	100	70.843	ENSAMXG00000038564	si:ch211-153b23.3	99	70.843	Astyanax_mexicanus
ENSNBRG00000013370	si:ch211-153b23.3	99	77.639	ENSCSEG00000014853	si:ch211-153b23.3	100	77.639	Cynoglossus_semilaevis
ENSNBRG00000013370	si:ch211-153b23.3	100	80.023	ENSCVAG00000021124	si:ch211-153b23.3	100	80.023	Cyprinodon_variegatus
ENSNBRG00000013370	si:ch211-153b23.3	57	33.143	ENSCVAG00000021145	si:ch211-153b23.4	64	33.333	Cyprinodon_variegatus
ENSNBRG00000013370	si:ch211-153b23.3	100	70.932	ENSDARG00000104919	si:ch211-153b23.3	99	71.044	Danio_rerio
ENSNBRG00000013370	si:ch211-153b23.3	59	33.583	ENSDARG00000077169	si:ch211-153b23.4	59	33.396	Danio_rerio
ENSNBRG00000013370	si:ch211-153b23.3	80	88.073	ENSELUG00000004912	si:ch211-153b23.3	99	88.073	Esox_lucius
ENSNBRG00000013370	si:ch211-153b23.3	100	81.293	ENSFHEG00000010030	si:ch211-153b23.3	99	81.293	Fundulus_heteroclitus
ENSNBRG00000013370	si:ch211-153b23.3	71	30.455	ENSFHEG00000010001	si:ch211-153b23.4	77	30.612	Fundulus_heteroclitus
ENSNBRG00000013370	si:ch211-153b23.3	100	80.250	ENSGAFG00000007455	si:ch211-153b23.3	99	80.250	Gambusia_affinis
ENSNBRG00000013370	si:ch211-153b23.3	56	33.013	ENSHBUG00000000013	si:ch211-153b23.4	65	33.013	Haplochromis_burtoni
ENSNBRG00000013370	si:ch211-153b23.3	100	99.088	ENSHBUG00000001760	si:ch211-153b23.3	100	99.088	Haplochromis_burtoni
ENSNBRG00000013370	si:ch211-153b23.3	100	70.957	ENSIPUG00000015213	si:ch211-153b23.3	99	70.957	Ictalurus_punctatus
ENSNBRG00000013370	si:ch211-153b23.3	58	33.522	ENSKMAG00000006829	si:ch211-153b23.4	63	33.459	Kryptolebias_marmoratus
ENSNBRG00000013370	si:ch211-153b23.3	99	79.886	ENSKMAG00000006792	si:ch211-153b23.3	99	79.886	Kryptolebias_marmoratus
ENSNBRG00000013370	si:ch211-153b23.3	59	33.396	ENSKMAG00000006919	-	59	33.396	Kryptolebias_marmoratus
ENSNBRG00000013370	si:ch211-153b23.3	100	80.682	ENSLBEG00000026324	si:ch211-153b23.3	99	80.682	Labrus_bergylta
ENSNBRG00000013370	si:ch211-153b23.3	94	57.738	ENSLACG00000005800	-	99	57.770	Latimeria_chalumnae
ENSNBRG00000013370	si:ch211-153b23.3	84	62.500	ENSLOCG00000015063	si:ch211-153b23.3	98	62.500	Lepisosteus_oculatus
ENSNBRG00000013370	si:ch211-153b23.3	59	33.019	ENSMAMG00000009277	si:ch211-153b23.4	62	32.765	Mastacembelus_armatus
ENSNBRG00000013370	si:ch211-153b23.3	59	32.510	ENSMAMG00000009358	si:ch211-153b23.4	63	32.510	Mastacembelus_armatus
ENSNBRG00000013370	si:ch211-153b23.3	100	80.068	ENSMAMG00000009328	si:ch211-153b23.3	100	80.068	Mastacembelus_armatus
ENSNBRG00000013370	si:ch211-153b23.3	100	98.860	ENSMZEG00005011450	si:ch211-153b23.3	100	98.860	Maylandia_zebra
ENSNBRG00000013370	si:ch211-153b23.3	59	33.456	ENSMZEG00005011433	si:ch211-153b23.4	63	33.456	Maylandia_zebra
ENSNBRG00000013370	si:ch211-153b23.3	100	80.296	ENSMMOG00000004436	si:ch211-153b23.3	99	80.296	Mola_mola
ENSNBRG00000013370	si:ch211-153b23.3	59	33.766	ENSONIG00000017875	si:ch211-153b23.4	59	33.766	Oreochromis_niloticus
ENSNBRG00000013370	si:ch211-153b23.3	100	77.765	ENSORLG00000006161	si:ch211-153b23.3	99	77.765	Oryzias_latipes
ENSNBRG00000013370	si:ch211-153b23.3	97	78.781	ENSORLG00020000910	si:ch211-153b23.3	100	78.781	Oryzias_latipes_hni
ENSNBRG00000013370	si:ch211-153b23.3	97	77.895	ENSORLG00015003698	si:ch211-153b23.3	100	77.895	Oryzias_latipes_hsok
ENSNBRG00000013370	si:ch211-153b23.3	59	33.648	ENSORLG00015003709	si:ch211-153b23.4	59	33.647	Oryzias_latipes_hsok
ENSNBRG00000013370	si:ch211-153b23.3	100	78.330	ENSOMEG00000007661	si:ch211-153b23.3	99	78.330	Oryzias_melastigma
ENSNBRG00000013370	si:ch211-153b23.3	97	72.145	ENSPKIG00000022450	si:ch211-153b23.3	100	72.145	Paramormyrops_kingsleyae
ENSNBRG00000013370	si:ch211-153b23.3	99	50.386	ENSPKIG00000021029	-	99	50.386	Paramormyrops_kingsleyae
ENSNBRG00000013370	si:ch211-153b23.3	84	77.551	ENSPMGG00000001311	si:ch211-153b23.3	100	77.551	Periophthalmus_magnuspinnatus
ENSNBRG00000013370	si:ch211-153b23.3	100	80.427	ENSPFOG00000012289	si:ch211-153b23.3	99	80.180	Poecilia_formosa
ENSNBRG00000013370	si:ch211-153b23.3	99	81.136	ENSPLAG00000016320	si:ch211-153b23.3	100	81.136	Poecilia_latipinna
ENSNBRG00000013370	si:ch211-153b23.3	58	32.700	ENSPMEG00000007538	si:ch211-153b23.4	63	32.700	Poecilia_mexicana
ENSNBRG00000013370	si:ch211-153b23.3	100	81.179	ENSPMEG00000008884	si:ch211-153b23.3	99	80.931	Poecilia_mexicana
ENSNBRG00000013370	si:ch211-153b23.3	59	33.456	ENSPNYG00000000250	si:ch211-153b23.4	63	33.456	Pundamilia_nyererei
ENSNBRG00000013370	si:ch211-153b23.3	100	99.088	ENSPNYG00000000251	si:ch211-153b23.3	100	99.088	Pundamilia_nyererei
ENSNBRG00000013370	si:ch211-153b23.3	100	71.882	ENSPNAG00000019592	si:ch211-153b23.3	99	71.882	Pygocentrus_nattereri
ENSNBRG00000013370	si:ch211-153b23.3	68	50.000	ENSSFOG00015009030	-	96	50.000	Scleropages_formosus
ENSNBRG00000013370	si:ch211-153b23.3	100	72.247	ENSSFOG00015010910	si:ch211-153b23.3	99	72.247	Scleropages_formosus
ENSNBRG00000013370	si:ch211-153b23.3	99	81.891	ENSSMAG00000005446	si:ch211-153b23.3	100	81.891	Scophthalmus_maximus
ENSNBRG00000013370	si:ch211-153b23.3	59	32.448	ENSSDUG00000006671	si:ch211-153b23.4	64	32.448	Seriola_dumerili
ENSNBRG00000013370	si:ch211-153b23.3	100	81.540	ENSSLDG00000008629	si:ch211-153b23.3	100	81.540	Seriola_lalandi_dorsalis
ENSNBRG00000013370	si:ch211-153b23.3	99	75.515	ENSTRUG00000020530	si:ch211-153b23.3	100	75.973	Takifugu_rubripes
ENSNBRG00000013370	si:ch211-153b23.3	93	81.579	ENSTNIG00000008962	si:ch211-153b23.3	99	81.579	Tetraodon_nigroviridis
ENSNBRG00000013370	si:ch211-153b23.3	59	32.519	ENSXMAG00000021388	si:ch211-153b23.4	62	32.959	Xiphophorus_maculatus
ENSNBRG00000013370	si:ch211-153b23.3	100	81.207	ENSXMAG00000029318	si:ch211-153b23.3	99	81.207	Xiphophorus_maculatus