EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000013392 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.4
Alias: fj08f03|fj10b02|im:7041150|wu:fj08f03|wu:fj10b02
Full Name: uncharacterized LOC102781413
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 3030 bases
Position: chrJH422275.1:8807002-8810031
Accession: 102781413
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000017345	Sua5_yciO_yrdC	PF01300.18	4.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000017811	-	2379	XM_006782046	ENSNBRP00000017345	793 (aa)	XP_006782109	-

Gene Model

Click here to download ENSNBRG00000013392's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000013392's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000013392	si:ch211-153b23.4	65	33.272	ENSNBRG00000013370	si:ch211-153b23.3	59	33.272

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000013392	si:ch211-153b23.4	96	82.161	ENSAPOG00000006178	si:ch211-153b23.4	88	82.872	Acanthochromis_polyacanthus
ENSNBRG00000013392	si:ch211-153b23.4	97	81.971	ENSAPOG00000006144	si:ch211-153b23.4	88	82.914	Acanthochromis_polyacanthus
ENSNBRG00000013392	si:ch211-153b23.4	98	88.408	ENSACIG00000006997	si:ch211-153b23.4	92	88.408	Amphilophus_citrinellus
ENSNBRG00000013392	si:ch211-153b23.4	98	77.041	ENSAOCG00000010999	si:ch211-153b23.4	95	77.041	Amphiprion_ocellaris
ENSNBRG00000013392	si:ch211-153b23.4	65	33.022	ENSAOCG00000010974	si:ch211-153b23.3	59	33.022	Amphiprion_ocellaris
ENSNBRG00000013392	si:ch211-153b23.4	99	78.608	ENSAPEG00000014665	si:ch211-153b23.4	93	78.608	Amphiprion_percula
ENSNBRG00000013392	si:ch211-153b23.4	65	32.453	ENSAPEG00000014700	si:ch211-153b23.3	59	32.453	Amphiprion_percula
ENSNBRG00000013392	si:ch211-153b23.4	65	32.264	ENSATEG00000004956	si:ch211-153b23.3	58	32.264	Anabas_testudineus
ENSNBRG00000013392	si:ch211-153b23.4	100	82.434	ENSATEG00000004948	si:ch211-153b23.4	91	82.434	Anabas_testudineus
ENSNBRG00000013392	si:ch211-153b23.4	100	59.301	ENSAPLG00000013596	-	97	59.301	Anas_platyrhynchos
ENSNBRG00000013392	si:ch211-153b23.4	100	98.871	ENSACLG00000005471	si:ch211-153b23.4	90	98.871	Astatotilapia_calliptera
ENSNBRG00000013392	si:ch211-153b23.4	65	33.088	ENSACLG00000005894	si:ch211-153b23.3	59	33.088	Astatotilapia_calliptera
ENSNBRG00000013392	si:ch211-153b23.4	100	71.662	ENSAMXG00000013879	si:ch211-153b23.4	94	71.662	Astyanax_mexicanus
ENSNBRG00000013392	si:ch211-153b23.4	100	77.792	ENSCSEG00000014838	si:ch211-153b23.4	95	77.792	Cynoglossus_semilaevis
ENSNBRG00000013392	si:ch211-153b23.4	64	34.026	ENSCSEG00000014853	si:ch211-153b23.3	58	34.026	Cynoglossus_semilaevis
ENSNBRG00000013392	si:ch211-153b23.4	100	81.211	ENSCVAG00000021145	si:ch211-153b23.4	99	81.211	Cyprinodon_variegatus
ENSNBRG00000013392	si:ch211-153b23.4	100	71.214	ENSDARG00000077169	si:ch211-153b23.4	91	71.214	Danio_rerio
ENSNBRG00000013392	si:ch211-153b23.4	100	69.451	ENSELUG00000004961	si:ch211-153b23.4	90	69.451	Esox_lucius
ENSNBRG00000013392	si:ch211-153b23.4	100	56.250	ENSFALG00000011343	-	92	56.250	Ficedula_albicollis
ENSNBRG00000013392	si:ch211-153b23.4	100	81.084	ENSFHEG00000010001	si:ch211-153b23.4	99	81.084	Fundulus_heteroclitus
ENSNBRG00000013392	si:ch211-153b23.4	84	90.860	ENSFHEG00000009888	si:ch211-153b23.4	75	90.860	Fundulus_heteroclitus
ENSNBRG00000013392	si:ch211-153b23.4	65	33.333	ENSGAFG00000007455	si:ch211-153b23.3	58	33.333	Gambusia_affinis
ENSNBRG00000013392	si:ch211-153b23.4	94	79.973	ENSGAFG00000007442	si:ch211-153b23.4	90	80.106	Gambusia_affinis
ENSNBRG00000013392	si:ch211-153b23.4	100	79.674	ENSGACG00000018253	si:ch211-153b23.4	94	79.674	Gasterosteus_aculeatus
ENSNBRG00000013392	si:ch211-153b23.4	86	62.029	ENSGAGG00000024601	-	92	62.029	Gopherus_agassizii
ENSNBRG00000013392	si:ch211-153b23.4	84	97.474	ENSHBUG00000000013	si:ch211-153b23.4	89	97.474	Haplochromis_burtoni
ENSNBRG00000013392	si:ch211-153b23.4	65	33.088	ENSHBUG00000001760	si:ch211-153b23.3	59	33.088	Haplochromis_burtoni
ENSNBRG00000013392	si:ch211-153b23.4	100	70.338	ENSIPUG00000015205	si:ch211-153b23.4	95	70.338	Ictalurus_punctatus
ENSNBRG00000013392	si:ch211-153b23.4	100	82.434	ENSKMAG00000006919	-	91	82.434	Kryptolebias_marmoratus
ENSNBRG00000013392	si:ch211-153b23.4	99	82.955	ENSKMAG00000006829	si:ch211-153b23.4	98	82.955	Kryptolebias_marmoratus
ENSNBRG00000013392	si:ch211-153b23.4	72	30.988	ENSKMAG00000006792	si:ch211-153b23.3	66	30.988	Kryptolebias_marmoratus
ENSNBRG00000013392	si:ch211-153b23.4	100	80.803	ENSLBEG00000026309	si:ch211-153b23.4	91	80.803	Labrus_bergylta
ENSNBRG00000013392	si:ch211-153b23.4	65	32.386	ENSLBEG00000026324	si:ch211-153b23.3	56	32.386	Labrus_bergylta
ENSNBRG00000013392	si:ch211-153b23.4	79	30.168	ENSLACG00000005800	-	77	30.168	Latimeria_chalumnae
ENSNBRG00000013392	si:ch211-153b23.4	100	62.718	ENSLACG00000017592	si:ch211-153b23.4	96	62.718	Latimeria_chalumnae
ENSNBRG00000013392	si:ch211-153b23.4	100	85.624	ENSMAMG00000009358	si:ch211-153b23.4	97	85.624	Mastacembelus_armatus
ENSNBRG00000013392	si:ch211-153b23.4	65	31.939	ENSMAMG00000009328	si:ch211-153b23.3	58	31.939	Mastacembelus_armatus
ENSNBRG00000013392	si:ch211-153b23.4	99	85.171	ENSMAMG00000009277	si:ch211-153b23.4	95	85.171	Mastacembelus_armatus
ENSNBRG00000013392	si:ch211-153b23.4	100	99.369	ENSMZEG00005011433	si:ch211-153b23.4	97	99.369	Maylandia_zebra
ENSNBRG00000013392	si:ch211-153b23.4	65	33.088	ENSMZEG00005011450	si:ch211-153b23.3	59	33.088	Maylandia_zebra
ENSNBRG00000013392	si:ch211-153b23.4	100	59.551	ENSMGAG00000005478	-	97	59.551	Meleagris_gallopavo
ENSNBRG00000013392	si:ch211-153b23.4	100	81.715	ENSMMOG00000004425	si:ch211-153b23.4	99	81.715	Mola_mola
ENSNBRG00000013392	si:ch211-153b23.4	100	97.742	ENSONIG00000017875	si:ch211-153b23.4	91	97.742	Oreochromis_niloticus
ENSNBRG00000013392	si:ch211-153b23.4	79	31.155	ENSORLG00000006161	si:ch211-153b23.3	75	30.898	Oryzias_latipes
ENSNBRG00000013392	si:ch211-153b23.4	99	79.271	ENSORLG00000006169	si:ch211-153b23.4	91	79.271	Oryzias_latipes
ENSNBRG00000013392	si:ch211-153b23.4	76	30.794	ENSORLG00020000910	si:ch211-153b23.3	74	30.794	Oryzias_latipes_hni
ENSNBRG00000013392	si:ch211-153b23.4	99	79.523	ENSORLG00020009905	si:ch211-153b23.4	91	79.523	Oryzias_latipes_hni
ENSNBRG00000013392	si:ch211-153b23.4	76	30.586	ENSORLG00015003698	si:ch211-153b23.3	74	30.586	Oryzias_latipes_hsok
ENSNBRG00000013392	si:ch211-153b23.4	99	79.523	ENSORLG00015003709	si:ch211-153b23.4	91	79.523	Oryzias_latipes_hsok
ENSNBRG00000013392	si:ch211-153b23.4	100	79.925	ENSOMEG00000007682	si:ch211-153b23.4	91	79.925	Oryzias_melastigma
ENSNBRG00000013392	si:ch211-153b23.4	64	33.270	ENSOMEG00000007661	si:ch211-153b23.3	59	33.270	Oryzias_melastigma
ENSNBRG00000013392	si:ch211-153b23.4	100	67.043	ENSPKIG00000014429	si:ch211-153b23.4	94	66.877	Paramormyrops_kingsleyae
ENSNBRG00000013392	si:ch211-153b23.4	50	37.037	ENSPKIG00000021029	-	59	33.892	Paramormyrops_kingsleyae
ENSNBRG00000013392	si:ch211-153b23.4	100	69.925	ENSPKIG00000025681	si:ch211-153b23.4	93	69.925	Paramormyrops_kingsleyae
ENSNBRG00000013392	si:ch211-153b23.4	61	32.317	ENSPKIG00000022450	si:ch211-153b23.3	56	32.317	Paramormyrops_kingsleyae
ENSNBRG00000013392	si:ch211-153b23.4	98	63.205	ENSPMGG00000001313	si:ch211-153b23.4	84	63.540	Periophthalmus_magnuspinnatus
ENSNBRG00000013392	si:ch211-153b23.4	83	81.982	ENSPFOG00000012164	si:ch211-153b23.4	93	81.982	Poecilia_formosa
ENSNBRG00000013392	si:ch211-153b23.4	65	33.523	ENSPFOG00000012289	si:ch211-153b23.3	59	33.523	Poecilia_formosa
ENSNBRG00000013392	si:ch211-153b23.4	100	80.353	ENSPLAG00000016295	si:ch211-153b23.4	99	80.353	Poecilia_latipinna
ENSNBRG00000013392	si:ch211-153b23.4	64	33.017	ENSPLAG00000016320	si:ch211-153b23.3	59	33.017	Poecilia_latipinna
ENSNBRG00000013392	si:ch211-153b23.4	98	78.562	ENSPMEG00000007538	si:ch211-153b23.4	95	78.562	Poecilia_mexicana
ENSNBRG00000013392	si:ch211-153b23.4	65	33.144	ENSPMEG00000008884	si:ch211-153b23.3	58	33.144	Poecilia_mexicana
ENSNBRG00000013392	si:ch211-153b23.4	100	99.117	ENSPNYG00000000250	si:ch211-153b23.4	97	99.117	Pundamilia_nyererei
ENSNBRG00000013392	si:ch211-153b23.4	65	33.088	ENSPNYG00000000251	si:ch211-153b23.3	59	33.088	Pundamilia_nyererei
ENSNBRG00000013392	si:ch211-153b23.4	100	72.466	ENSPNAG00000019554	si:ch211-153b23.4	90	72.466	Pygocentrus_nattereri
ENSNBRG00000013392	si:ch211-153b23.4	65	31.801	ENSPNAG00000019592	si:ch211-153b23.3	56	31.801	Pygocentrus_nattereri
ENSNBRG00000013392	si:ch211-153b23.4	100	67.491	ENSSFOG00015003920	-	92	67.491	Scleropages_formosus
ENSNBRG00000013392	si:ch211-153b23.4	65	33.015	ENSSFOG00015010910	si:ch211-153b23.3	58	33.015	Scleropages_formosus
ENSNBRG00000013392	si:ch211-153b23.4	100	72.522	ENSSFOG00015010891	si:ch211-153b23.4	92	72.522	Scleropages_formosus
ENSNBRG00000013392	si:ch211-153b23.4	100	81.054	ENSSMAG00000010067	si:ch211-153b23.4	92	81.054	Scophthalmus_maximus
ENSNBRG00000013392	si:ch211-153b23.4	64	33.270	ENSSMAG00000005446	si:ch211-153b23.3	58	33.270	Scophthalmus_maximus
ENSNBRG00000013392	si:ch211-153b23.4	100	82.850	ENSSDUG00000006671	si:ch211-153b23.4	99	82.850	Seriola_dumerili
ENSNBRG00000013392	si:ch211-153b23.4	84	80.924	ENSSDUG00000006931	si:ch211-153b23.4	92	80.924	Seriola_dumerili
ENSNBRG00000013392	si:ch211-153b23.4	84	82.609	ENSSDUG00000006842	si:ch211-153b23.4	85	82.609	Seriola_dumerili
ENSNBRG00000013392	si:ch211-153b23.4	65	33.522	ENSSLDG00000008629	si:ch211-153b23.3	56	33.522	Seriola_lalandi_dorsalis
ENSNBRG00000013392	si:ch211-153b23.4	100	58.427	ENSTGUG00000005499	-	98	58.427	Taeniopygia_guttata
ENSNBRG00000013392	si:ch211-153b23.4	65	34.160	ENSTRUG00000020530	si:ch211-153b23.3	57	34.160	Takifugu_rubripes
ENSNBRG00000013392	si:ch211-153b23.4	100	78.868	ENSTRUG00000003247	si:ch211-153b23.4	99	78.868	Takifugu_rubripes
ENSNBRG00000013392	si:ch211-153b23.4	65	30.534	ENSTNIG00000008962	si:ch211-153b23.3	54	30.534	Tetraodon_nigroviridis
ENSNBRG00000013392	si:ch211-153b23.4	100	77.945	ENSTNIG00000008958	si:ch211-153b23.4	96	77.945	Tetraodon_nigroviridis
ENSNBRG00000013392	si:ch211-153b23.4	100	55.879	ENSXETG00000004489	-	90	55.879	Xenopus_tropicalis
ENSNBRG00000013392	si:ch211-153b23.4	99	80.682	ENSXMAG00000009416	-	93	80.682	Xiphophorus_maculatus
ENSNBRG00000013392	si:ch211-153b23.4	65	32.700	ENSXMAG00000029318	si:ch211-153b23.3	59	32.700	Xiphophorus_maculatus
ENSNBRG00000013392	si:ch211-153b23.4	99	81.187	ENSXMAG00000021388	si:ch211-153b23.4	96	81.305	Xiphophorus_maculatus