EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000013394 (Gene tree)
Gene ID: 102792114
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: DNA repair and recombination protein RAD54B-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 13068 bases
Position: chrJH422352.1:309722-322789
Accession: 102792114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000017361	ResIII	PF04851.15	8.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000017829	-	2580	XM_006801311	ENSNBRP00000017361	859 (aa)	XP_006801374	-

Gene Model

Click here to download ENSNBRG00000013394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000013394's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000013394	rad54b	53	32.186	ENSNBRG00000012749	smarcad1a	59	31.931
ENSNBRG00000013394	rad54b	58	30.435	ENSNBRG00000024242	hells	60	30.435

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000013394	rad54b	84	58.082	ENSG00000265817	FSBP	99	58.082	Homo_sapiens
ENSNBRG00000013394	rad54b	99	54.367	ENSG00000197275	RAD54B	99	54.317	Homo_sapiens
ENSNBRG00000013394	rad54b	99	54.367	ENSAMEG00000005834	-	99	54.367	Ailuropoda_melanoleuca
ENSNBRG00000013394	rad54b	100	90.216	ENSACIG00000013005	rad54b	100	90.216	Amphilophus_citrinellus
ENSNBRG00000013394	rad54b	100	80.541	ENSAOCG00000008523	rad54b	100	80.541	Amphiprion_ocellaris
ENSNBRG00000013394	rad54b	100	80.204	ENSAPEG00000001673	rad54b	100	80.543	Amphiprion_percula
ENSNBRG00000013394	rad54b	100	85.155	ENSATEG00000001527	rad54b	100	85.155	Anabas_testudineus
ENSNBRG00000013394	rad54b	99	57.454	ENSAPLG00000014366	-	99	57.454	Anas_platyrhynchos
ENSNBRG00000013394	rad54b	91	60.152	ENSACAG00000003671	-	98	60.152	Anolis_carolinensis
ENSNBRG00000013394	rad54b	75	60.124	ENSANAG00000019528	-	99	60.124	Aotus_nancymaae
ENSNBRG00000013394	rad54b	100	98.952	ENSACLG00000007826	rad54b	100	98.952	Astatotilapia_calliptera
ENSNBRG00000013394	rad54b	91	69.604	ENSAMXG00000039985	rad54b	94	68.987	Astyanax_mexicanus
ENSNBRG00000013394	rad54b	92	59.975	ENSBTAG00000000632	RAD54B	86	59.975	Bos_taurus
ENSNBRG00000013394	rad54b	84	35.894	WBGene00013792	Y116A8C.13	98	33.830	Caenorhabditis_elegans
ENSNBRG00000013394	rad54b	99	54.694	ENSCJAG00000000080	-	99	58.299	Callithrix_jacchus
ENSNBRG00000013394	rad54b	99	55.180	ENSCAFG00000009179	RAD54B	99	55.180	Canis_familiaris
ENSNBRG00000013394	rad54b	99	55.180	ENSCAFG00020012084	-	99	55.180	Canis_lupus_dingo
ENSNBRG00000013394	rad54b	92	60.101	ENSCHIG00000008230	-	86	60.101	Capra_hircus
ENSNBRG00000013394	rad54b	99	54.536	ENSTSYG00000013234	-	99	54.536	Carlito_syrichta
ENSNBRG00000013394	rad54b	99	56.229	ENSCPOG00000011643	-	99	56.229	Cavia_porcellus
ENSNBRG00000013394	rad54b	99	54.821	ENSCCAG00000011754	-	99	58.209	Cebus_capucinus
ENSNBRG00000013394	rad54b	99	53.939	ENSCATG00000030661	-	99	58.654	Cercocebus_atys
ENSNBRG00000013394	rad54b	99	56.201	ENSCLAG00000010476	-	99	56.201	Chinchilla_lanigera
ENSNBRG00000013394	rad54b	92	58.794	ENSCSAG00000012712	-	87	58.794	Chlorocebus_sabaeus
ENSNBRG00000013394	rad54b	92	63.019	ENSCPBG00000003204	-	86	63.019	Chrysemys_picta_bellii
ENSNBRG00000013394	rad54b	99	54.326	ENSCANG00000017939	-	99	58.791	Colobus_angolensis_palliatus
ENSNBRG00000013394	rad54b	99	55.568	ENSCGRG00001020184	Rad54b	99	55.568	Cricetulus_griseus_chok1gshd
ENSNBRG00000013394	rad54b	99	54.311	ENSCGRG00000016752	Rad54b	99	54.311	Cricetulus_griseus_crigri
ENSNBRG00000013394	rad54b	99	81.097	ENSCSEG00000001601	rad54b	99	81.097	Cynoglossus_semilaevis
ENSNBRG00000013394	rad54b	100	81.570	ENSCVAG00000009200	rad54b	100	81.570	Cyprinodon_variegatus
ENSNBRG00000013394	rad54b	99	64.890	ENSDARG00000092134	rad54b	99	70.156	Danio_rerio
ENSNBRG00000013394	rad54b	99	55.240	ENSDNOG00000015535	-	99	55.240	Dasypus_novemcinctus
ENSNBRG00000013394	rad54b	99	55.968	ENSDORG00000002492	Rad54b	99	55.866	Dipodomys_ordii
ENSNBRG00000013394	rad54b	86	57.143	ENSETEG00000010605	-	100	57.143	Echinops_telfairi
ENSNBRG00000013394	rad54b	92	50.608	ENSEBUG00000009104	rad54b	86	50.547	Eptatretus_burgeri
ENSNBRG00000013394	rad54b	92	59.748	ENSEASG00005004021	-	89	59.748	Equus_asinus_asinus
ENSNBRG00000013394	rad54b	99	55.315	ENSECAG00000021949	-	99	55.315	Equus_caballus
ENSNBRG00000013394	rad54b	76	53.750	ENSEEUG00000008056	-	72	53.750	Erinaceus_europaeus
ENSNBRG00000013394	rad54b	99	78.856	ENSELUG00000009287	rad54b	93	78.856	Esox_lucius
ENSNBRG00000013394	rad54b	93	59.158	ENSFCAG00000015513	-	99	59.508	Felis_catus
ENSNBRG00000013394	rad54b	99	56.786	ENSFALG00000005467	-	99	56.786	Ficedula_albicollis
ENSNBRG00000013394	rad54b	99	54.476	ENSFDAG00000020541	-	100	54.476	Fukomys_damarensis
ENSNBRG00000013394	rad54b	99	77.931	ENSFHEG00000014382	rad54b	96	77.931	Fundulus_heteroclitus
ENSNBRG00000013394	rad54b	91	81.692	ENSGMOG00000014774	rad54b	99	81.692	Gadus_morhua
ENSNBRG00000013394	rad54b	99	56.958	ENSGALG00000043597	RAD54B	99	56.958	Gallus_gallus
ENSNBRG00000013394	rad54b	99	85.360	ENSGAFG00000007901	rad54b	99	83.935	Gambusia_affinis
ENSNBRG00000013394	rad54b	99	79.280	ENSGACG00000009128	rad54b	99	79.280	Gasterosteus_aculeatus
ENSNBRG00000013394	rad54b	99	57.421	ENSGAGG00000018747	-	99	57.421	Gopherus_agassizii
ENSNBRG00000013394	rad54b	99	54.107	ENSGGOG00000023516	-	99	54.107	Gorilla_gorilla
ENSNBRG00000013394	rad54b	99	98.634	ENSHBUG00000016017	rad54b	91	98.634	Haplochromis_burtoni
ENSNBRG00000013394	rad54b	99	54.338	ENSHGLG00000008263	RAD54B	99	54.338	Heterocephalus_glaber_female
ENSNBRG00000013394	rad54b	99	53.664	ENSHGLG00100008108	-	99	53.664	Heterocephalus_glaber_male
ENSNBRG00000013394	rad54b	99	74.190	ENSHCOG00000004764	rad54b	99	76.202	Hippocampus_comes
ENSNBRG00000013394	rad54b	95	66.786	ENSIPUG00000018531	rad54b	88	66.786	Ictalurus_punctatus
ENSNBRG00000013394	rad54b	99	54.176	ENSSTOG00000010791	-	99	54.176	Ictidomys_tridecemlineatus
ENSNBRG00000013394	rad54b	99	54.089	ENSJJAG00000010314	Rad54b	99	54.089	Jaculus_jaculus
ENSNBRG00000013394	rad54b	100	80.792	ENSKMAG00000004744	rad54b	100	80.792	Kryptolebias_marmoratus
ENSNBRG00000013394	rad54b	86	64.133	ENSLACG00000000859	-	100	64.133	Latimeria_chalumnae
ENSNBRG00000013394	rad54b	99	62.406	ENSLOCG00000010100	rad54b	94	69.451	Lepisosteus_oculatus
ENSNBRG00000013394	rad54b	92	57.503	ENSLAFG00000015315	-	97	57.503	Loxodonta_africana
ENSNBRG00000013394	rad54b	99	53.939	ENSMFAG00000031629	-	99	58.654	Macaca_fascicularis
ENSNBRG00000013394	rad54b	99	53.939	ENSMMUG00000005659	-	99	53.939	Macaca_mulatta
ENSNBRG00000013394	rad54b	99	54.057	ENSMNEG00000016408	-	99	54.057	Macaca_nemestrina
ENSNBRG00000013394	rad54b	99	53.939	ENSMLEG00000006946	-	99	53.939	Mandrillus_leucophaeus
ENSNBRG00000013394	rad54b	100	82.520	ENSMAMG00000012269	rad54b	99	82.520	Mastacembelus_armatus
ENSNBRG00000013394	rad54b	99	98.758	ENSMZEG00005005281	rad54b	96	99.125	Maylandia_zebra
ENSNBRG00000013394	rad54b	99	56.678	ENSMGAG00000012024	-	99	56.616	Meleagris_gallopavo
ENSNBRG00000013394	rad54b	99	55.518	ENSMAUG00000013586	Rad54b	99	55.518	Mesocricetus_auratus
ENSNBRG00000013394	rad54b	99	55.936	ENSMICG00000000754	-	99	55.936	Microcebus_murinus
ENSNBRG00000013394	rad54b	99	55.419	ENSMOCG00000020035	Rad54b	99	55.419	Microtus_ochrogaster
ENSNBRG00000013394	rad54b	99	81.271	ENSMMOG00000003394	rad54b	99	81.271	Mola_mola
ENSNBRG00000013394	rad54b	93	58.655	ENSMODG00000007343	-	98	58.655	Monodelphis_domestica
ENSNBRG00000013394	rad54b	74	87.167	ENSMALG00000001520	rad54b	100	87.167	Monopterus_albus
ENSNBRG00000013394	rad54b	99	55.978	MGP_CAROLIEiJ_G0025810	Rad54b	99	55.978	Mus_caroli
ENSNBRG00000013394	rad54b	99	55.260	ENSMUSG00000078773	Rad54b	99	55.260	Mus_musculus
ENSNBRG00000013394	rad54b	99	55.840	MGP_PahariEiJ_G0023933	Rad54b	99	55.840	Mus_pahari
ENSNBRG00000013394	rad54b	99	55.592	MGP_SPRETEiJ_G0026758	Rad54b	99	55.592	Mus_spretus
ENSNBRG00000013394	rad54b	92	59.269	ENSMPUG00000008878	-	97	59.572	Mustela_putorius_furo
ENSNBRG00000013394	rad54b	99	54.793	ENSMLUG00000008953	-	99	54.793	Myotis_lucifugus
ENSNBRG00000013394	rad54b	99	54.465	ENSNGAG00000017537	Rad54b	99	54.355	Nannospalax_galili
ENSNBRG00000013394	rad54b	99	54.198	ENSNLEG00000003062	-	99	58.003	Nomascus_leucogenys
ENSNBRG00000013394	rad54b	74	61.381	ENSMEUG00000012426	-	69	61.381	Notamacropus_eugenii
ENSNBRG00000013394	rad54b	99	55.336	ENSODEG00000019564	-	99	55.336	Octodon_degus
ENSNBRG00000013394	rad54b	84	75.000	ENSODEG00000002650	-	97	75.000	Octodon_degus
ENSNBRG00000013394	rad54b	99	97.516	ENSONIG00000006067	rad54b	100	91.457	Oreochromis_niloticus
ENSNBRG00000013394	rad54b	87	59.763	ENSOANG00000011348	-	99	59.816	Ornithorhynchus_anatinus
ENSNBRG00000013394	rad54b	99	54.198	ENSOCUG00000016478	-	99	54.198	Oryctolagus_cuniculus
ENSNBRG00000013394	rad54b	100	85.644	ENSORLG00000008918	rad54b	100	88.062	Oryzias_latipes
ENSNBRG00000013394	rad54b	74	87.907	ENSORLG00020012171	rad54b	100	87.907	Oryzias_latipes_hni
ENSNBRG00000013394	rad54b	100	85.043	ENSORLG00015018536	rad54b	92	85.043	Oryzias_latipes_hsok
ENSNBRG00000013394	rad54b	90	86.476	ENSOMEG00000004345	rad54b	100	86.476	Oryzias_melastigma
ENSNBRG00000013394	rad54b	99	53.821	ENSOGAG00000007854	-	99	53.821	Otolemur_garnettii
ENSNBRG00000013394	rad54b	92	60.000	ENSOARG00000007691	-	97	60.000	Ovis_aries
ENSNBRG00000013394	rad54b	99	53.384	ENSPPAG00000029572	-	99	53.384	Pan_paniscus
ENSNBRG00000013394	rad54b	99	54.962	ENSPPRG00000007571	-	99	59.371	Panthera_pardus
ENSNBRG00000013394	rad54b	84	59.644	ENSPTIG00000012670	-	99	59.508	Panthera_tigris_altaica
ENSNBRG00000013394	rad54b	99	54.476	ENSPTRG00000020427	-	99	58.276	Pan_troglodytes
ENSNBRG00000013394	rad54b	99	53.939	ENSPANG00000019566	-	99	53.939	Papio_anubis
ENSNBRG00000013394	rad54b	99	64.425	ENSPKIG00000014974	rad54b	99	64.425	Paramormyrops_kingsleyae
ENSNBRG00000013394	rad54b	99	55.952	ENSPSIG00000002383	-	96	61.635	Pelodiscus_sinensis
ENSNBRG00000013394	rad54b	99	55.568	ENSPEMG00000012133	Rad54b	99	55.568	Peromyscus_maniculatus_bairdii
ENSNBRG00000013394	rad54b	91	59.039	ENSPMAG00000002916	rad54b	98	59.039	Petromyzon_marinus
ENSNBRG00000013394	rad54b	92	59.166	ENSPCIG00000020151	-	92	59.039	Phascolarctos_cinereus
ENSNBRG00000013394	rad54b	99	85.608	ENSPFOG00000023411	rad54b	91	85.608	Poecilia_formosa
ENSNBRG00000013394	rad54b	99	85.484	ENSPLAG00000010430	rad54b	91	85.484	Poecilia_latipinna
ENSNBRG00000013394	rad54b	99	85.856	ENSPMEG00000016873	rad54b	99	82.360	Poecilia_mexicana
ENSNBRG00000013394	rad54b	99	85.856	ENSPREG00000018443	rad54b	99	82.986	Poecilia_reticulata
ENSNBRG00000013394	rad54b	99	54.526	ENSPPYG00000018750	-	99	54.526	Pongo_abelii
ENSNBRG00000013394	rad54b	99	54.853	ENSPCOG00000026845	-	99	58.356	Propithecus_coquereli
ENSNBRG00000013394	rad54b	86	58.077	ENSPVAG00000000261	-	86	58.077	Pteropus_vampyrus
ENSNBRG00000013394	rad54b	93	95.609	ENSPNYG00000018303	rad54b	97	95.609	Pundamilia_nyererei
ENSNBRG00000013394	rad54b	99	65.933	ENSPNAG00000000295	rad54b	99	65.353	Pygocentrus_nattereri
ENSNBRG00000013394	rad54b	99	55.072	ENSRNOG00000039949	Rad54b	99	55.072	Rattus_norvegicus
ENSNBRG00000013394	rad54b	99	53.888	ENSRBIG00000020419	-	99	53.888	Rhinopithecus_bieti
ENSNBRG00000013394	rad54b	99	53.888	ENSRROG00000039897	-	99	53.888	Rhinopithecus_roxellana
ENSNBRG00000013394	rad54b	89	35.756	YBR073W	RDH54	85	36.095	Saccharomyces_cerevisiae
ENSNBRG00000013394	rad54b	99	54.694	ENSSBOG00000028501	-	99	54.694	Saimiri_boliviensis_boliviensis
ENSNBRG00000013394	rad54b	99	54.674	ENSSHAG00000017038	-	99	54.674	Sarcophilus_harrisii
ENSNBRG00000013394	rad54b	66	72.007	ENSSFOG00015008483	rad54b	89	72.007	Scleropages_formosus
ENSNBRG00000013394	rad54b	97	87.374	ENSSMAG00000018659	rad54b	99	83.702	Scophthalmus_maximus
ENSNBRG00000013394	rad54b	97	85.345	ENSSDUG00000001122	rad54b	91	85.345	Seriola_dumerili
ENSNBRG00000013394	rad54b	100	85.511	ENSSLDG00000013787	rad54b	100	82.442	Seriola_lalandi_dorsalis
ENSNBRG00000013394	rad54b	99	58.072	ENSSPUG00000016497	-	99	58.072	Sphenodon_punctatus
ENSNBRG00000013394	rad54b	100	86.266	ENSSPAG00000012800	rad54b	100	86.266	Stegastes_partitus
ENSNBRG00000013394	rad54b	99	54.767	ENSSSCG00000006101	-	98	59.217	Sus_scrofa
ENSNBRG00000013394	rad54b	99	57.283	ENSTGUG00000011880	-	99	57.283	Taeniopygia_guttata
ENSNBRG00000013394	rad54b	99	83.811	ENSTRUG00000010015	rad54b	90	83.811	Takifugu_rubripes
ENSNBRG00000013394	rad54b	92	55.429	ENSTTRG00000006312	-	86	55.303	Tursiops_truncatus
ENSNBRG00000013394	rad54b	99	54.635	ENSUMAG00000016401	-	99	54.635	Ursus_maritimus
ENSNBRG00000013394	rad54b	92	60.025	ENSVPAG00000003157	-	87	60.025	Vicugna_pacos
ENSNBRG00000013394	rad54b	99	48.884	ENSXETG00000025924	rad54b	98	52.956	Xenopus_tropicalis
ENSNBRG00000013394	rad54b	99	82.887	ENSXMAG00000013141	rad54b	99	82.887	Xiphophorus_maculatus