EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000013501 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 4207 bases
Position: chrJH422449.1:46504-50710
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000017574	zf-C2H2	PF00096.26	5.6e-30	1	5
ENSNBRP00000017574	zf-C2H2	PF00096.26	5.6e-30	2	5
ENSNBRP00000017574	zf-C2H2	PF00096.26	5.6e-30	3	5
ENSNBRP00000017574	zf-C2H2	PF00096.26	5.6e-30	4	5
ENSNBRP00000017574	zf-C2H2	PF00096.26	5.6e-30	5	5
ENSNBRP00000017574	zf-met	PF12874.7	1.2e-10	1	2
ENSNBRP00000017574	zf-met	PF12874.7	1.2e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000018048	-	765	-	ENSNBRP00000017574	254 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000013501's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000013501's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000013501	-	98	58.235	ENSNBRG00000007311	-	90	58.235
ENSNBRG00000013501	-	100	43.709	ENSNBRG00000015774	gfi1ab	51	43.709
ENSNBRG00000013501	-	89	47.183	ENSNBRG00000024020	-	63	47.183
ENSNBRG00000013501	-	87	47.244	ENSNBRG00000001761	-	58	47.244
ENSNBRG00000013501	-	98	50.000	ENSNBRG00000006112	-	54	50.000
ENSNBRG00000013501	-	78	39.161	ENSNBRG00000008827	znf319b	89	39.161
ENSNBRG00000013501	-	78	44.595	ENSNBRG00000016603	-	88	44.595
ENSNBRG00000013501	-	79	41.040	ENSNBRG00000004723	-	84	41.040
ENSNBRG00000013501	-	77	55.422	ENSNBRG00000003000	-	85	55.422
ENSNBRG00000013501	-	78	56.098	ENSNBRG00000000305	-	81	56.098
ENSNBRG00000013501	-	79	42.667	ENSNBRG00000004976	prdm5	78	42.667
ENSNBRG00000013501	-	78	40.972	ENSNBRG00000024293	-	85	41.259
ENSNBRG00000013501	-	82	44.134	ENSNBRG00000024051	-	53	44.134
ENSNBRG00000013501	-	97	40.000	ENSNBRG00000006411	-	90	40.000
ENSNBRG00000013501	-	99	41.071	ENSNBRG00000016564	-	90	41.071
ENSNBRG00000013501	-	99	40.609	ENSNBRG00000010987	-	88	44.286
ENSNBRG00000013501	-	100	43.961	ENSNBRG00000024066	-	97	43.961
ENSNBRG00000013501	-	98	51.807	ENSNBRG00000016169	-	78	51.807
ENSNBRG00000013501	-	80	44.444	ENSNBRG00000005823	-	83	44.444
ENSNBRG00000013501	-	91	43.860	ENSNBRG00000005796	-	93	43.860
ENSNBRG00000013501	-	87	44.262	ENSNBRG00000021967	-	66	44.262
ENSNBRG00000013501	-	97	41.786	ENSNBRG00000010194	-	90	41.071
ENSNBRG00000013501	-	96	41.212	ENSNBRG00000021998	-	87	41.212
ENSNBRG00000013501	-	98	63.415	ENSNBRG00000000960	-	100	57.237
ENSNBRG00000013501	-	64	40.704	ENSNBRG00000001813	-	62	40.704
ENSNBRG00000013501	-	89	42.308	ENSNBRG00000008223	-	79	43.333
ENSNBRG00000013501	-	99	37.097	ENSNBRG00000019550	znf341	52	37.097
ENSNBRG00000013501	-	83	44.444	ENSNBRG00000004523	-	94	44.444
ENSNBRG00000013501	-	80	49.704	ENSNBRG00000024019	-	89	49.704
ENSNBRG00000013501	-	84	44.828	ENSNBRG00000023960	-	80	44.828
ENSNBRG00000013501	-	83	42.162	ENSNBRG00000003250	-	93	41.538
ENSNBRG00000013501	-	98	50.233	ENSNBRG00000000321	-	99	51.042
ENSNBRG00000013501	-	99	55.612	ENSNBRG00000000577	-	91	55.612
ENSNBRG00000013501	-	78	49.286	ENSNBRG00000007602	-	86	49.286
ENSNBRG00000013501	-	82	39.429	ENSNBRG00000002946	-	53	39.429
ENSNBRG00000013501	-	96	41.837	ENSNBRG00000000708	-	87	41.837
ENSNBRG00000013501	-	86	56.897	ENSNBRG00000016666	-	97	49.655
ENSNBRG00000013501	-	96	58.182	ENSNBRG00000024354	-	96	58.182
ENSNBRG00000013501	-	94	47.059	ENSNBRG00000020159	znf526	77	41.085
ENSNBRG00000013501	-	98	50.746	ENSNBRG00000016234	-	88	50.746
ENSNBRG00000013501	-	85	45.600	ENSNBRG00000016577	si:dkey-182i3.9	94	45.600
ENSNBRG00000013501	-	83	44.526	ENSNBRG00000009128	-	60	44.526
ENSNBRG00000013501	-	87	44.578	ENSNBRG00000005849	-	93	44.578
ENSNBRG00000013501	-	85	48.521	ENSNBRG00000024048	-	89	48.521
ENSNBRG00000013501	-	78	51.807	ENSNBRG00000024046	-	52	51.807
ENSNBRG00000013501	-	98	50.228	ENSNBRG00000023229	-	86	50.228
ENSNBRG00000013501	-	98	48.795	ENSNBRG00000015652	-	91	49.405
ENSNBRG00000013501	-	99	53.608	ENSNBRG00000000523	-	80	53.608
ENSNBRG00000013501	-	82	46.364	ENSNBRG00000020314	si:dkey-89b17.4	60	46.364
ENSNBRG00000013501	-	76	41.880	ENSNBRG00000001834	-	92	41.880
ENSNBRG00000013501	-	96	50.435	ENSNBRG00000001641	-	72	50.435
ENSNBRG00000013501	-	79	41.935	ENSNBRG00000007221	scrt2	52	41.935
ENSNBRG00000013501	-	89	58.235	ENSNBRG00000024345	-	94	58.235
ENSNBRG00000013501	-	96	55.056	ENSNBRG00000024344	-	75	55.056
ENSNBRG00000013501	-	88	41.935	ENSNBRG00000014882	-	64	41.935
ENSNBRG00000013501	-	98	58.108	ENSNBRG00000003124	-	97	58.108
ENSNBRG00000013501	-	99	49.558	ENSNBRG00000000492	-	96	49.558
ENSNBRG00000013501	-	76	41.221	ENSNBRG00000012376	-	98	41.221
ENSNBRG00000013501	-	79	45.503	ENSNBRG00000008123	-	79	45.503
ENSNBRG00000013501	-	98	52.632	ENSNBRG00000019481	-	92	52.632
ENSNBRG00000013501	-	97	47.191	ENSNBRG00000013604	-	94	50.862
ENSNBRG00000013501	-	78	45.128	ENSNBRG00000004557	-	85	45.128
ENSNBRG00000013501	-	85	40.306	ENSNBRG00000015442	ZNF319	87	40.306
ENSNBRG00000013501	-	81	47.586	ENSNBRG00000019004	-	68	47.586
ENSNBRG00000013501	-	83	41.818	ENSNBRG00000010351	-	96	41.818
ENSNBRG00000013501	-	79	47.959	ENSNBRG00000023956	-	51	47.959
ENSNBRG00000013501	-	84	55.789	ENSNBRG00000016219	-	90	55.789
ENSNBRG00000013501	-	91	41.089	ENSNBRG00000016550	-	90	41.089
ENSNBRG00000013501	-	81	52.941	ENSNBRG00000021355	-	86	52.941
ENSNBRG00000013501	-	85	49.490	ENSNBRG00000024014	-	72	49.490
ENSNBRG00000013501	-	78	43.902	ENSNBRG00000014403	-	63	43.902
ENSNBRG00000013501	-	96	60.870	ENSNBRG00000014088	-	94	60.870
ENSNBRG00000013501	-	78	33.645	ENSNBRG00000009811	-	91	33.645
ENSNBRG00000013501	-	77	58.683	ENSNBRG00000006125	-	91	58.683
ENSNBRG00000013501	-	95	55.556	ENSNBRG00000007384	-	58	56.250
ENSNBRG00000013501	-	85	47.899	ENSNBRG00000021237	-	78	47.899
ENSNBRG00000013501	-	85	58.140	ENSNBRG00000019770	-	87	56.364
ENSNBRG00000013501	-	77	55.405	ENSNBRG00000010405	-	91	55.405
ENSNBRG00000013501	-	78	44.118	ENSNBRG00000018718	zbtb47b	67	44.118
ENSNBRG00000013501	-	78	47.283	ENSNBRG00000002542	-	82	47.283
ENSNBRG00000013501	-	86	46.032	ENSNBRG00000007276	-	53	46.032
ENSNBRG00000013501	-	81	45.604	ENSNBRG00000022241	-	86	45.604
ENSNBRG00000013501	-	85	45.714	ENSNBRG00000009075	znf236	74	45.714
ENSNBRG00000013501	-	85	45.408	ENSNBRG00000024054	-	58	45.408
ENSNBRG00000013501	-	98	60.000	ENSNBRG00000004822	-	66	60.000
ENSNBRG00000013501	-	88	45.029	ENSNBRG00000008106	-	92	45.029
ENSNBRG00000013501	-	84	38.953	ENSNBRG00000009279	-	88	38.953
ENSNBRG00000013501	-	94	59.854	ENSNBRG00000015873	-	93	59.854
ENSNBRG00000013501	-	85	34.307	ENSNBRG00000013983	scrt1b	65	34.307
ENSNBRG00000013501	-	94	50.000	ENSNBRG00000002902	-	99	47.778
ENSNBRG00000013501	-	84	43.871	ENSNBRG00000016582	-	85	43.871
ENSNBRG00000013501	-	89	43.709	ENSNBRG00000012391	gfi1b	85	43.709
ENSNBRG00000013501	-	98	61.818	ENSNBRG00000001163	-	94	59.864
ENSNBRG00000013501	-	78	43.902	ENSNBRG00000003394	-	69	43.902
ENSNBRG00000013501	-	80	42.105	ENSNBRG00000024294	-	61	42.105
ENSNBRG00000013501	-	87	39.200	ENSNBRG00000011785	snai2	63	39.200
ENSNBRG00000013501	-	77	55.056	ENSNBRG00000004381	-	74	55.056
ENSNBRG00000013501	-	98	46.226	ENSNBRG00000006757	-	96	53.279
ENSNBRG00000013501	-	79	43.216	ENSNBRG00000005805	-	93	43.216
ENSNBRG00000013501	-	79	53.927	ENSNBRG00000013583	-	90	53.927
ENSNBRG00000013501	-	93	51.095	ENSNBRG00000024179	-	69	51.095
ENSNBRG00000013501	-	77	59.633	ENSNBRG00000000793	-	99	59.633
ENSNBRG00000013501	-	92	41.327	ENSNBRG00000009815	-	88	41.327
ENSNBRG00000013501	-	81	49.485	ENSNBRG00000024086	-	62	49.485
ENSNBRG00000013501	-	98	61.765	ENSNBRG00000016282	-	99	56.667
ENSNBRG00000013501	-	78	51.163	ENSNBRG00000001608	-	94	51.163
ENSNBRG00000013501	-	82	40.000	ENSNBRG00000022534	znf646	67	40.000
ENSNBRG00000013501	-	84	43.038	ENSNBRG00000005175	zbtb41	78	43.038

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000013501	-	78	62.105	ENSAPOG00000005767	-	100	62.105	Acanthochromis_polyacanthus
ENSNBRG00000013501	-	97	61.446	ENSAOCG00000000570	-	90	61.446	Amphiprion_ocellaris
ENSNBRG00000013501	-	99	40.214	ENSAPEG00000018796	-	92	48.980	Amphiprion_percula
ENSNBRG00000013501	-	79	40.909	ENSCVAG00000018507	-	80	40.331	Cyprinodon_variegatus
ENSNBRG00000013501	-	98	50.000	ENSKMAG00000013745	-	74	50.000	Kryptolebias_marmoratus
ENSNBRG00000013501	-	83	40.351	ENSKMAG00000013239	-	53	40.351	Kryptolebias_marmoratus
ENSNBRG00000013501	-	82	44.056	ENSMAMG00000009817	-	70	43.750	Mastacembelus_armatus
ENSNBRG00000013501	-	98	56.122	ENSMAMG00000018114	-	86	55.307	Mastacembelus_armatus
ENSNBRG00000013501	-	98	56.831	ENSMZEG00005016808	-	97	55.676	Maylandia_zebra
ENSNBRG00000013501	-	98	49.419	ENSMALG00000008930	-	89	49.419	Monopterus_albus
ENSNBRG00000013501	-	77	50.581	ENSMALG00000012116	-	96	50.581	Monopterus_albus
ENSNBRG00000013501	-	85	57.653	ENSMALG00000001085	-	93	57.653	Monopterus_albus
ENSNBRG00000013501	-	98	45.783	ENSMALG00000012757	-	94	45.783	Monopterus_albus
ENSNBRG00000013501	-	84	54.070	ENSMALG00000004579	-	93	57.944	Monopterus_albus
ENSNBRG00000013501	-	81	44.444	ENSOMEG00000021420	-	62	44.444	Oryzias_melastigma
ENSNBRG00000013501	-	81	37.209	ENSPREG00000014898	-	62	37.209	Poecilia_reticulata
ENSNBRG00000013501	-	97	45.249	ENSPNYG00000007756	-	81	45.249	Pundamilia_nyererei
ENSNBRG00000013501	-	76	47.343	ENSSDUG00000001263	-	88	47.343	Seriola_dumerili
ENSNBRG00000013501	-	96	47.590	ENSSLDG00000023661	-	95	47.590	Seriola_lalandi_dorsalis
ENSNBRG00000013501	-	84	50.898	ENSTRUG00000003111	-	84	50.898	Takifugu_rubripes
ENSNBRG00000013501	-	78	53.012	ENSTRUG00000022919	-	76	53.012	Takifugu_rubripes
ENSNBRG00000013501	-	97	54.545	ENSTRUG00000022206	-	80	54.545	Takifugu_rubripes
ENSNBRG00000013501	-	97	53.488	ENSTRUG00000023925	-	86	53.488	Takifugu_rubripes
ENSNBRG00000013501	-	97	50.265	ENSTRUG00000001268	-	94	50.000	Takifugu_rubripes
ENSNBRG00000013501	-	98	55.000	ENSTRUG00000012273	-	86	55.000	Takifugu_rubripes
ENSNBRG00000013501	-	81	48.058	ENSTNIG00000005856	-	99	48.058	Tetraodon_nigroviridis
ENSNBRG00000013501	-	92	47.945	ENSXCOG00000019492	-	99	47.945	Xiphophorus_couchianus
ENSNBRG00000013501	-	78	45.685	ENSXMAG00000022297	-	100	45.685	Xiphophorus_maculatus