EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000013507 (Gene tree)
Gene ID: 102794850
Gene Symbol: rab18a
Alias: fc62e07|wu:fc62e07|zgc:77145
Full Name: ras-related protein Rab-18-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 13118 bases
Position: chrJH422397.1:1203584-1216701
Accession: 102794850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000017502	MMR_HSR1	PF01926.23	9.1e-08	1	1
ENSNBRP00000017511	MMR_HSR1	PF01926.23	7.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000017974	-	2684	XM_006804519	ENSNBRP00000017502	204 (aa)	XP_006804582	UPI0003AF6D46
ENSNBRT00000017985	-	543	-	ENSNBRP00000017511	180 (aa)	-	UPI0003AF93FB

Gene Model

Click here to download ENSNBRG00000013507's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000013507's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000013507	rab18a	81	49.701	ENSNBRG00000020492	-	82	49.701
ENSNBRG00000013507	rab18a	92	42.553	ENSNBRG00000005116	rab11al	78	44.379
ENSNBRG00000013507	rab18a	93	38.265	ENSNBRG00000022235	rab33a	82	38.265
ENSNBRG00000013507	rab18a	83	40.116	ENSNBRG00000018106	-	81	40.116
ENSNBRG00000013507	rab18a	83	44.444	ENSNBRG00000023898	rab11ba	65	44.444
ENSNBRG00000013507	rab18a	89	42.308	ENSNBRG00000016922	-	79	42.308
ENSNBRG00000013507	rab18a	73	39.735	ENSNBRG00000007077	rab33ba	59	39.735
ENSNBRG00000013507	rab18a	84	38.728	ENSNBRG00000005082	RAB39B	81	38.728
ENSNBRG00000013507	rab18a	79	45.679	ENSNBRG00000000372	rab11bb	74	45.679
ENSNBRG00000013507	rab18a	84	50.867	ENSNBRG00000002082	rab30	78	50.867
ENSNBRG00000013507	rab18a	79	37.952	ENSNBRG00000013940	rab9b	75	37.952
ENSNBRG00000013507	rab18a	86	33.520	ENSNBRG00000000489	rabl2	79	33.520
ENSNBRG00000013507	rab18a	74	34.194	ENSNBRG00000008714	RAB29	68	34.194
ENSNBRG00000013507	rab18a	83	37.059	ENSNBRG00000017793	RAB17	75	37.059
ENSNBRG00000013507	rab18a	80	43.636	ENSNBRG00000018165	rab5c	91	39.303
ENSNBRG00000013507	rab18a	85	37.288	ENSNBRG00000023214	si:dkey-13a21.4	83	37.288
ENSNBRG00000013507	rab18a	83	38.728	ENSNBRG00000022702	rab41	79	38.728
ENSNBRG00000013507	rab18a	88	44.751	ENSNBRG00000004124	rab13	89	44.751
ENSNBRG00000013507	rab18a	94	32.338	ENSNBRG00000007544	rab32b	92	32.338
ENSNBRG00000013507	rab18a	57	32.479	ENSNBRG00000020245	arl5c	68	32.479
ENSNBRG00000013507	rab18a	79	45.679	ENSNBRG00000023885	-	74	45.679
ENSNBRG00000013507	rab18a	79	43.210	ENSNBRG00000011607	rab25a	76	43.210
ENSNBRG00000013507	rab18a	82	35.294	ENSNBRG00000014613	si:ch73-116o1.2	81	35.294
ENSNBRG00000013507	rab18a	79	48.780	ENSNBRG00000014428	rab12	67	48.780
ENSNBRG00000013507	rab18a	97	36.364	ENSNBRG00000013673	rab6ba	95	36.364
ENSNBRG00000013507	rab18a	80	37.126	ENSNBRG00000002825	-	80	37.126
ENSNBRG00000013507	rab18a	75	48.387	ENSNBRG00000008930	si:dkey-16l2.16	73	48.387
ENSNBRG00000013507	rab18a	82	44.048	ENSNBRG00000001056	rab15	77	44.048
ENSNBRG00000013507	rab18a	87	38.547	ENSNBRG00000016716	rab6a	84	38.547
ENSNBRG00000013507	rab18a	72	41.447	ENSNBRG00000017996	-	66	41.447
ENSNBRG00000013507	rab18a	93	44.845	ENSNBRG00000003873	rab1ba	96	44.845
ENSNBRG00000013507	rab18a	80	48.485	ENSNBRG00000005542	-	76	48.485
ENSNBRG00000013507	rab18a	73	42.667	ENSNBRG00000015905	rab6bb	75	42.667
ENSNBRG00000013507	rab18a	84	36.628	ENSNBRG00000013691	rab23	75	37.013
ENSNBRG00000013507	rab18a	80	47.273	ENSNBRG00000002726	-	76	47.273
ENSNBRG00000013507	rab18a	77	32.716	ENSNBRG00000013795	rheb	85	32.716
ENSNBRG00000013507	rab18a	89	30.978	ENSNBRG00000004403	kras	97	30.978
ENSNBRG00000013507	rab18a	81	40.361	ENSNBRG00000011872	-	80	40.361
ENSNBRG00000013507	rab18a	95	44.231	ENSNBRG00000001241	rab2a	97	44.231
ENSNBRG00000013507	rab18a	71	40.816	ENSNBRG00000002684	zgc:101559	63	40.816
ENSNBRG00000013507	rab18a	79	32.530	ENSNBRG00000022552	dnajc27	61	32.530
ENSNBRG00000013507	rab18a	99	85.294	ENSNBRG00000008137	rab18b	99	85.294
ENSNBRG00000013507	rab18a	80	45.122	ENSNBRG00000002778	RAB15	77	45.122
ENSNBRG00000013507	rab18a	80	37.725	ENSNBRG00000002772	-	81	37.725
ENSNBRG00000013507	rab18a	90	40.642	ENSNBRG00000011763	rab5aa	86	40.642
ENSNBRG00000013507	rab18a	80	36.905	ENSNBRG00000024340	RAB9A	79	36.905
ENSNBRG00000013507	rab18a	52	36.111	ENSNBRG00000002346	RAP2B	89	36.975
ENSNBRG00000013507	rab18a	80	39.394	ENSNBRG00000021487	rab42a	62	39.394
ENSNBRG00000013507	rab18a	79	50.617	ENSNBRG00000006202	zgc:171927	76	50.617
ENSNBRG00000013507	rab18a	79	45.062	ENSNBRG00000012893	rab11a	75	45.223
ENSNBRG00000013507	rab18a	80	37.725	ENSNBRG00000021829	RAB7A	81	37.725
ENSNBRG00000013507	rab18a	77	31.481	ENSNBRG00000016978	rhebl1	85	31.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000013507	rab18a	100	98.039	ENSAPOG00000010760	rab18a	100	98.039	Acanthochromis_polyacanthus
ENSNBRG00000013507	rab18a	100	98.333	ENSACIG00000009617	rab18a	100	98.333	Amphilophus_citrinellus
ENSNBRG00000013507	rab18a	100	98.529	ENSAOCG00000016233	rab18a	100	98.529	Amphiprion_ocellaris
ENSNBRG00000013507	rab18a	100	98.529	ENSAPEG00000005392	rab18a	100	98.529	Amphiprion_percula
ENSNBRG00000013507	rab18a	100	96.569	ENSATEG00000021911	rab18a	100	96.569	Anabas_testudineus
ENSNBRG00000013507	rab18a	100	86.341	ENSACAG00000005463	-	100	86.341	Anolis_carolinensis
ENSNBRG00000013507	rab18a	100	100.000	ENSACLG00000011484	rab18a	100	100.000	Astatotilapia_calliptera
ENSNBRG00000013507	rab18a	100	84.466	ENSCPBG00000015839	-	100	84.466	Chrysemys_picta_bellii
ENSNBRG00000013507	rab18a	96	69.652	ENSCPBG00000027619	-	98	69.652	Chrysemys_picta_bellii
ENSNBRG00000013507	rab18a	97	74.372	ENSCING00000006838	-	99	74.372	Ciona_intestinalis
ENSNBRG00000013507	rab18a	97	73.367	ENSCSAVG00000010348	-	99	73.367	Ciona_savignyi
ENSNBRG00000013507	rab18a	100	95.098	ENSCSEG00000011816	rab18a	100	95.098	Cynoglossus_semilaevis
ENSNBRG00000013507	rab18a	96	94.898	ENSCVAG00000015451	rab18a	100	94.608	Cyprinodon_variegatus
ENSNBRG00000013507	rab18a	100	81.951	ENSDARG00000055291	rab18a	100	81.951	Danio_rerio
ENSNBRG00000013507	rab18a	100	91.707	ENSELUG00000003805	rab18a	100	91.707	Esox_lucius
ENSNBRG00000013507	rab18a	100	96.078	ENSFHEG00000019455	rab18a	100	96.078	Fundulus_heteroclitus
ENSNBRG00000013507	rab18a	100	94.608	ENSGAFG00000002790	rab18a	100	94.608	Gambusia_affinis
ENSNBRG00000013507	rab18a	100	84.466	ENSGAGG00000015642	-	100	84.466	Gopherus_agassizii
ENSNBRG00000013507	rab18a	100	100.000	ENSHBUG00000001518	rab18a	100	100.000	Haplochromis_burtoni
ENSNBRG00000013507	rab18a	99	97.537	ENSLBEG00000005861	rab18a	95	97.537	Labrus_bergylta
ENSNBRG00000013507	rab18a	93	87.895	ENSLACG00000009310	rab18a	100	85.922	Latimeria_chalumnae
ENSNBRG00000013507	rab18a	100	88.293	ENSLOCG00000007491	rab18a	100	88.293	Lepisosteus_oculatus
ENSNBRG00000013507	rab18a	100	94.608	ENSMAMG00000014320	rab18a	100	94.608	Mastacembelus_armatus
ENSNBRG00000013507	rab18a	100	99.510	ENSMZEG00005017235	rab18a	100	99.510	Maylandia_zebra
ENSNBRG00000013507	rab18a	100	97.059	ENSMALG00000009813	rab18a	100	97.059	Monopterus_albus
ENSNBRG00000013507	rab18a	100	96.569	ENSORLG00000004624	rab18a	100	96.569	Oryzias_latipes
ENSNBRG00000013507	rab18a	100	97.059	ENSORLG00020008333	rab18a	100	97.059	Oryzias_latipes_hni
ENSNBRG00000013507	rab18a	100	96.078	ENSORLG00015004739	rab18a	100	96.078	Oryzias_latipes_hsok
ENSNBRG00000013507	rab18a	100	96.569	ENSOMEG00000020605	rab18a	100	96.569	Oryzias_melastigma
ENSNBRG00000013507	rab18a	100	87.317	ENSPKIG00000009825	rab18a	100	87.317	Paramormyrops_kingsleyae
ENSNBRG00000013507	rab18a	100	93.627	ENSPMGG00000020409	-	100	93.627	Periophthalmus_magnuspinnatus
ENSNBRG00000013507	rab18a	100	95.098	ENSPFOG00000007571	rab18a	100	95.098	Poecilia_formosa
ENSNBRG00000013507	rab18a	100	95.098	ENSPLAG00000010104	rab18a	100	95.098	Poecilia_latipinna
ENSNBRG00000013507	rab18a	100	95.098	ENSPMEG00000013085	rab18a	100	95.098	Poecilia_mexicana
ENSNBRG00000013507	rab18a	100	95.098	ENSPREG00000005923	rab18a	83	95.098	Poecilia_reticulata
ENSNBRG00000013507	rab18a	100	100.000	ENSPNYG00000007064	rab18a	100	100.000	Pundamilia_nyererei
ENSNBRG00000013507	rab18a	99	80.597	ENSPNAG00000011548	rab18a	100	80.597	Pygocentrus_nattereri
ENSNBRG00000013507	rab18a	100	90.244	ENSSFOG00015017444	rab18a	84	90.244	Scleropages_formosus
ENSNBRG00000013507	rab18a	94	94.301	ENSSMAG00000002969	rab18a	100	94.146	Scophthalmus_maximus
ENSNBRG00000013507	rab18a	100	96.569	ENSSDUG00000003823	rab18a	100	96.569	Seriola_dumerili
ENSNBRG00000013507	rab18a	100	96.569	ENSSLDG00000006977	rab18a	100	96.569	Seriola_lalandi_dorsalis
ENSNBRG00000013507	rab18a	93	88.360	ENSSPUG00000017677	-	100	85.922	Sphenodon_punctatus
ENSNBRG00000013507	rab18a	100	92.647	ENSTRUG00000004984	rab18a	100	92.647	Takifugu_rubripes
ENSNBRG00000013507	rab18a	100	86.893	ENSUMAG00000015574	-	100	86.893	Ursus_maritimus
ENSNBRG00000013507	rab18a	100	86.408	ENSXETG00000004556	rab18	100	86.893	Xenopus_tropicalis
ENSNBRG00000013507	rab18a	100	95.098	ENSXMAG00000024122	rab18a	100	95.098	Xiphophorus_maculatus