EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000013552 (Gene tree)
Gene ID: 102788342
Gene Symbol: si:dkey-37o8.1
Alias: fi12b10|wu:fi12b10
Full Name: elongation factor 1-alpha-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 1902 bases
Position: chrJH422308.1:1966353-1968254
Accession: 102788342
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000017562	GTP_EFTU	PF00009.27	1.5e-53	1	1
ENSNBRP00000017562	MMR_HSR1	PF01926.23	1.6e-07	1	1
ENSNBRP00000017562	GTP_EFTU_D2	PF03144.25	1.7e-11	1	1
ENSNBRP00000017562	GTP_EFTU_D3	PF03143.17	8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000018036	-	1371	XM_006794999	ENSNBRP00000017562	456 (aa)	XP_006795062	UPI0003EBFC19

Gene Model

Click here to download ENSNBRG00000013552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000013552's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000013552	si:dkey-37o8.1	87	66.329	ENSNBRG00000016788	-	95	66.329
ENSNBRG00000013552	si:dkey-37o8.1	96	38.009	ENSNBRG00000020095	hbs1l	71	38.009
ENSNBRG00000013552	si:dkey-37o8.1	84	30.256	ENSNBRG00000006466	tufm	92	30.256
ENSNBRG00000013552	si:dkey-37o8.1	95	36.927	ENSNBRG00000002803	GSPT1	77	35.862
ENSNBRG00000013552	si:dkey-37o8.1	97	71.783	ENSNBRG00000011060	eef1a1b	96	71.783
ENSNBRG00000013552	si:dkey-37o8.1	97	62.585	ENSNBRG00000017346	-	95	62.585

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000013552	si:dkey-37o8.1	100	91.447	ENSAPOG00000016459	si:dkey-37o8.1	100	91.447	Acanthochromis_polyacanthus
ENSNBRG00000013552	si:dkey-37o8.1	99	91.150	ENSACIG00000020985	si:dkey-37o8.1	84	91.150	Amphilophus_citrinellus
ENSNBRG00000013552	si:dkey-37o8.1	100	92.779	ENSAOCG00000002663	si:dkey-37o8.1	100	92.779	Amphiprion_ocellaris
ENSNBRG00000013552	si:dkey-37o8.1	100	92.560	ENSAPEG00000012670	si:dkey-37o8.1	100	92.560	Amphiprion_percula
ENSNBRG00000013552	si:dkey-37o8.1	93	93.365	ENSATEG00000002217	si:dkey-37o8.1	99	93.365	Anabas_testudineus
ENSNBRG00000013552	si:dkey-37o8.1	100	99.561	ENSACLG00000003519	si:dkey-37o8.1	100	99.561	Astatotilapia_calliptera
ENSNBRG00000013552	si:dkey-37o8.1	100	84.279	ENSAMXG00000002728	si:dkey-37o8.1	100	84.279	Astyanax_mexicanus
ENSNBRG00000013552	si:dkey-37o8.1	96	75.171	ENSCPBG00000020570	-	87	75.171	Chrysemys_picta_bellii
ENSNBRG00000013552	si:dkey-37o8.1	100	85.371	ENSCSEG00000019807	si:dkey-37o8.1	100	84.665	Cynoglossus_semilaevis
ENSNBRG00000013552	si:dkey-37o8.1	98	88.393	ENSCVAG00000009828	si:dkey-37o8.1	98	88.393	Cyprinodon_variegatus
ENSNBRG00000013552	si:dkey-37o8.1	97	82.619	ENSDARG00000071727	si:dkey-37o8.1	92	82.619	Danio_rerio
ENSNBRG00000013552	si:dkey-37o8.1	100	84.061	ENSELUG00000007495	si:dkey-37o8.1	100	84.061	Esox_lucius
ENSNBRG00000013552	si:dkey-37o8.1	98	89.286	ENSFHEG00000017452	si:dkey-37o8.1	98	89.286	Fundulus_heteroclitus
ENSNBRG00000013552	si:dkey-37o8.1	97	79.910	ENSGMOG00000006122	si:dkey-37o8.1	98	79.910	Gadus_morhua
ENSNBRG00000013552	si:dkey-37o8.1	98	82.143	ENSGAFG00000000367	si:dkey-37o8.1	99	82.143	Gambusia_affinis
ENSNBRG00000013552	si:dkey-37o8.1	100	88.403	ENSGACG00000004505	si:dkey-37o8.1	100	88.403	Gasterosteus_aculeatus
ENSNBRG00000013552	si:dkey-37o8.1	96	75.171	ENSGAGG00000007724	-	94	75.171	Gopherus_agassizii
ENSNBRG00000013552	si:dkey-37o8.1	100	99.342	ENSHBUG00000015515	si:dkey-37o8.1	100	99.342	Haplochromis_burtoni
ENSNBRG00000013552	si:dkey-37o8.1	99	79.823	ENSHCOG00000001215	si:dkey-37o8.1	100	79.823	Hippocampus_comes
ENSNBRG00000013552	si:dkey-37o8.1	100	81.878	ENSIPUG00000004067	si:dkey-37o8.1	100	81.878	Ictalurus_punctatus
ENSNBRG00000013552	si:dkey-37o8.1	100	89.059	ENSKMAG00000015910	si:dkey-37o8.1	100	89.059	Kryptolebias_marmoratus
ENSNBRG00000013552	si:dkey-37o8.1	100	91.667	ENSLBEG00000021334	si:dkey-37o8.1	90	91.667	Labrus_bergylta
ENSNBRG00000013552	si:dkey-37o8.1	97	77.201	ENSLACG00000003948	si:dkey-37o8.1	96	77.201	Latimeria_chalumnae
ENSNBRG00000013552	si:dkey-37o8.1	98	81.879	ENSLOCG00000011245	si:dkey-37o8.1	97	81.879	Lepisosteus_oculatus
ENSNBRG00000013552	si:dkey-37o8.1	98	75.223	ENSMAMG00000009907	si:dkey-37o8.1	94	75.223	Mastacembelus_armatus
ENSNBRG00000013552	si:dkey-37o8.1	100	99.561	ENSMZEG00005018358	si:dkey-37o8.1	100	99.561	Maylandia_zebra
ENSNBRG00000013552	si:dkey-37o8.1	98	89.755	ENSMMOG00000004111	si:dkey-37o8.1	98	89.755	Mola_mola
ENSNBRG00000013552	si:dkey-37o8.1	96	81.963	ENSMALG00000017152	si:dkey-37o8.1	99	81.963	Monopterus_albus
ENSNBRG00000013552	si:dkey-37o8.1	100	98.904	ENSONIG00000006165	si:dkey-37o8.1	100	98.904	Oreochromis_niloticus
ENSNBRG00000013552	si:dkey-37o8.1	100	90.570	ENSORLG00000019066	si:dkey-37o8.1	100	90.570	Oryzias_latipes
ENSNBRG00000013552	si:dkey-37o8.1	100	90.570	ENSORLG00020008094	si:dkey-37o8.1	100	90.570	Oryzias_latipes_hni
ENSNBRG00000013552	si:dkey-37o8.1	100	90.132	ENSORLG00015008410	si:dkey-37o8.1	100	90.132	Oryzias_latipes_hsok
ENSNBRG00000013552	si:dkey-37o8.1	100	89.693	ENSOMEG00000001868	si:dkey-37o8.1	100	89.693	Oryzias_melastigma
ENSNBRG00000013552	si:dkey-37o8.1	97	84.199	ENSPKIG00000017246	si:dkey-37o8.1	97	84.199	Paramormyrops_kingsleyae
ENSNBRG00000013552	si:dkey-37o8.1	58	68.382	ENSPSIG00000008080	-	96	68.382	Pelodiscus_sinensis
ENSNBRG00000013552	si:dkey-37o8.1	98	89.509	ENSPFOG00000013173	si:dkey-37o8.1	98	89.509	Poecilia_formosa
ENSNBRG00000013552	si:dkey-37o8.1	100	87.309	ENSPLAG00000010405	si:dkey-37o8.1	100	87.309	Poecilia_latipinna
ENSNBRG00000013552	si:dkey-37o8.1	98	89.732	ENSPMEG00000015233	si:dkey-37o8.1	98	89.732	Poecilia_mexicana
ENSNBRG00000013552	si:dkey-37o8.1	98	89.213	ENSPREG00000006280	si:dkey-37o8.1	98	89.213	Poecilia_reticulata
ENSNBRG00000013552	si:dkey-37o8.1	100	98.904	ENSPNYG00000002059	si:dkey-37o8.1	100	98.904	Pundamilia_nyererei
ENSNBRG00000013552	si:dkey-37o8.1	100	83.624	ENSPNAG00000009990	si:dkey-37o8.1	100	83.624	Pygocentrus_nattereri
ENSNBRG00000013552	si:dkey-37o8.1	98	82.812	ENSSFOG00015019070	si:dkey-37o8.1	98	82.812	Scleropages_formosus
ENSNBRG00000013552	si:dkey-37o8.1	100	92.544	ENSSMAG00000016143	si:dkey-37o8.1	100	92.544	Scophthalmus_maximus
ENSNBRG00000013552	si:dkey-37o8.1	100	91.904	ENSSDUG00000009163	si:dkey-37o8.1	100	91.904	Seriola_dumerili
ENSNBRG00000013552	si:dkey-37o8.1	100	91.685	ENSSLDG00000023761	si:dkey-37o8.1	100	91.685	Seriola_lalandi_dorsalis
ENSNBRG00000013552	si:dkey-37o8.1	99	71.179	ENSSPUG00000007467	-	99	71.179	Sphenodon_punctatus
ENSNBRG00000013552	si:dkey-37o8.1	100	91.685	ENSSPAG00000013856	si:dkey-37o8.1	100	91.685	Stegastes_partitus
ENSNBRG00000013552	si:dkey-37o8.1	99	90.728	ENSTRUG00000009006	si:dkey-37o8.1	100	90.728	Takifugu_rubripes
ENSNBRG00000013552	si:dkey-37o8.1	99	91.209	ENSTNIG00000017138	si:dkey-37o8.1	98	91.209	Tetraodon_nigroviridis
ENSNBRG00000013552	si:dkey-37o8.1	96	75.399	ENSXETG00000017744	42Sp50	96	74.775	Xenopus_tropicalis
ENSNBRG00000013552	si:dkey-37o8.1	98	89.438	ENSXCOG00000012296	si:dkey-37o8.1	98	89.438	Xiphophorus_couchianus
ENSNBRG00000013552	si:dkey-37o8.1	98	89.509	ENSXMAG00000001998	si:dkey-37o8.1	98	89.509	Xiphophorus_maculatus