EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000013604 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 5061 bases
Position: chrJH422449.1:72090-77150
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000017836	zf-C2H2	PF00096.26	8.2e-28	1	4
ENSNBRP00000017836	zf-C2H2	PF00096.26	8.2e-28	2	4
ENSNBRP00000017836	zf-C2H2	PF00096.26	8.2e-28	3	4
ENSNBRP00000017836	zf-C2H2	PF00096.26	8.2e-28	4	4
ENSNBRP00000017836	zf-met	PF12874.7	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000018318	-	870	-	ENSNBRP00000017836	289 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000013604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000013604's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000013604	-	73	45.070	ENSNBRG00000021355	-	90	45.070
ENSNBRG00000013604	-	72	41.964	ENSNBRG00000005796	-	92	41.964
ENSNBRG00000013604	-	74	44.324	ENSNBRG00000016603	-	89	44.324
ENSNBRG00000013604	-	93	44.172	ENSNBRG00000021967	-	78	44.172
ENSNBRG00000013604	-	71	43.046	ENSNBRG00000005805	-	93	43.046
ENSNBRG00000013604	-	69	54.717	ENSNBRG00000018718	zbtb47b	68	54.717
ENSNBRG00000013604	-	89	48.936	ENSNBRG00000023956	-	53	47.236
ENSNBRG00000013604	-	72	39.623	ENSNBRG00000001834	-	92	39.623
ENSNBRG00000013604	-	72	38.583	ENSNBRG00000012376	-	94	42.222
ENSNBRG00000013604	-	74	36.111	ENSNBRG00000014403	-	71	34.641
ENSNBRG00000013604	-	82	56.579	ENSNBRG00000019770	-	91	52.941
ENSNBRG00000013604	-	74	43.511	ENSNBRG00000009128	-	58	43.511
ENSNBRG00000013604	-	72	50.641	ENSNBRG00000002542	-	82	50.641
ENSNBRG00000013604	-	70	41.500	ENSNBRG00000023960	-	80	40.323
ENSNBRG00000013604	-	69	50.311	ENSNBRG00000024046	-	56	50.311
ENSNBRG00000013604	-	95	53.266	ENSNBRG00000007311	-	92	53.266
ENSNBRG00000013604	-	92	36.916	ENSNBRG00000005175	zbtb41	74	36.916
ENSNBRG00000013604	-	70	56.164	ENSNBRG00000001608	-	93	56.164
ENSNBRG00000013604	-	93	43.939	ENSNBRG00000021998	-	89	43.939
ENSNBRG00000013604	-	78	42.748	ENSNBRG00000011785	snai2	63	42.748
ENSNBRG00000013604	-	75	41.872	ENSNBRG00000004523	-	93	41.872
ENSNBRG00000013604	-	80	46.541	ENSNBRG00000003250	-	90	46.541
ENSNBRG00000013604	-	72	39.041	ENSNBRG00000007221	scrt2	61	39.041
ENSNBRG00000013604	-	92	55.446	ENSNBRG00000015873	-	99	59.236
ENSNBRG00000013604	-	79	46.012	ENSNBRG00000004792	-	54	46.012
ENSNBRG00000013604	-	55	36.782	ENSNBRG00000010364	si:ch211-236k19.4	57	36.782
ENSNBRG00000013604	-	93	54.037	ENSNBRG00000000523	-	78	54.037
ENSNBRG00000013604	-	72	50.758	ENSNBRG00000000321	-	96	50.758
ENSNBRG00000013604	-	89	40.092	ENSNBRG00000009279	-	96	40.092
ENSNBRG00000013604	-	70	52.792	ENSNBRG00000024345	-	88	52.792
ENSNBRG00000013604	-	80	36.538	ENSNBRG00000010987	-	88	41.259
ENSNBRG00000013604	-	71	43.046	ENSNBRG00000004723	-	83	43.046
ENSNBRG00000013604	-	69	40.559	ENSNBRG00000002946	-	50	40.559
ENSNBRG00000013604	-	71	44.949	ENSNBRG00000024020	-	50	44.949
ENSNBRG00000013604	-	92	56.338	ENSNBRG00000010194	-	90	56.338
ENSNBRG00000013604	-	69	65.833	ENSNBRG00000000793	-	99	65.833
ENSNBRG00000013604	-	70	41.294	ENSNBRG00000008106	-	92	42.289
ENSNBRG00000013604	-	93	37.838	ENSNBRG00000018449	PRDM15	55	37.838
ENSNBRG00000013604	-	83	36.620	ENSNBRG00000007276	-	61	36.620
ENSNBRG00000013604	-	66	56.522	ENSNBRG00000010405	-	82	56.522
ENSNBRG00000013604	-	66	43.750	ENSNBRG00000019881	-	64	43.750
ENSNBRG00000013604	-	70	57.233	ENSNBRG00000024354	-	94	57.233
ENSNBRG00000013604	-	92	48.246	ENSNBRG00000001813	-	62	48.246
ENSNBRG00000013604	-	70	45.833	ENSNBRG00000019004	-	82	45.833
ENSNBRG00000013604	-	71	40.645	ENSNBRG00000020159	znf526	52	38.043
ENSNBRG00000013604	-	73	46.226	ENSNBRG00000024019	-	96	46.857
ENSNBRG00000013604	-	81	49.689	ENSNBRG00000024014	-	74	49.689
ENSNBRG00000013604	-	92	51.064	ENSNBRG00000016169	-	77	51.064
ENSNBRG00000013604	-	79	40.698	ENSNBRG00000022534	znf646	61	40.698
ENSNBRG00000013604	-	70	42.202	ENSNBRG00000003394	-	76	41.818
ENSNBRG00000013604	-	93	53.049	ENSNBRG00000000577	-	87	53.049
ENSNBRG00000013604	-	97	57.143	ENSNBRG00000015652	-	91	57.143
ENSNBRG00000013604	-	80	53.061	ENSNBRG00000016219	-	89	53.061
ENSNBRG00000013604	-	94	56.774	ENSNBRG00000001163	-	98	52.381
ENSNBRG00000013604	-	74	42.105	ENSNBRG00000016564	-	83	41.772
ENSNBRG00000013604	-	70	47.009	ENSNBRG00000005849	-	91	43.537
ENSNBRG00000013604	-	92	59.091	ENSNBRG00000003124	-	95	57.396
ENSNBRG00000013604	-	82	40.094	ENSNBRG00000016666	-	94	56.522
ENSNBRG00000013604	-	69	46.369	ENSNBRG00000000305	-	79	46.369
ENSNBRG00000013604	-	77	49.029	ENSNBRG00000003000	-	82	49.029
ENSNBRG00000013604	-	69	51.064	ENSNBRG00000024048	-	86	51.064
ENSNBRG00000013604	-	98	58.376	ENSNBRG00000014088	-	97	62.195
ENSNBRG00000013604	-	80	45.050	ENSNBRG00000008123	-	76	45.050
ENSNBRG00000013604	-	74	39.744	ENSNBRG00000015442	ZNF319	87	39.744
ENSNBRG00000013604	-	67	38.571	ENSNBRG00000013983	scrt1b	51	38.571
ENSNBRG00000013604	-	94	38.983	ENSNBRG00000018141	-	67	38.983
ENSNBRG00000013604	-	69	59.091	ENSNBRG00000019481	-	89	59.091
ENSNBRG00000013604	-	94	54.028	ENSNBRG00000004822	-	65	54.028
ENSNBRG00000013604	-	69	56.738	ENSNBRG00000006125	-	90	56.738
ENSNBRG00000013604	-	76	50.000	ENSNBRG00000016550	-	87	50.000
ENSNBRG00000013604	-	70	49.425	ENSNBRG00000000708	-	87	49.425
ENSNBRG00000013604	-	92	50.847	ENSNBRG00000016234	-	88	50.847
ENSNBRG00000013604	-	94	49.068	ENSNBRG00000024179	-	72	49.068
ENSNBRG00000013604	-	94	50.862	ENSNBRG00000013501	-	97	47.191
ENSNBRG00000013604	-	80	49.524	ENSNBRG00000009075	znf236	72	49.524
ENSNBRG00000013604	-	80	43.846	ENSNBRG00000004381	-	84	50.000
ENSNBRG00000013604	-	78	57.273	ENSNBRG00000013583	-	99	57.273
ENSNBRG00000013604	-	72	43.478	ENSNBRG00000012391	gfi1b	50	43.478
ENSNBRG00000013604	-	84	45.699	ENSNBRG00000021375	-	57	45.699
ENSNBRG00000013604	-	95	52.326	ENSNBRG00000000492	-	94	54.167
ENSNBRG00000013604	-	71	42.105	ENSNBRG00000004976	prdm5	67	42.105
ENSNBRG00000013604	-	72	39.623	ENSNBRG00000024294	-	62	39.623
ENSNBRG00000013604	-	71	43.529	ENSNBRG00000004557	-	85	42.424
ENSNBRG00000013604	-	69	39.623	ENSNBRG00000014882	-	54	39.623
ENSNBRG00000013604	-	73	44.767	ENSNBRG00000001761	-	56	44.767
ENSNBRG00000013604	-	88	53.043	ENSNBRG00000007384	-	78	53.285
ENSNBRG00000013604	-	80	47.458	ENSNBRG00000024344	-	88	51.053
ENSNBRG00000013604	-	75	43.678	ENSNBRG00000005823	-	85	43.949
ENSNBRG00000013604	-	92	48.691	ENSNBRG00000006757	-	94	47.236
ENSNBRG00000013604	-	86	40.667	ENSNBRG00000006411	-	99	40.667
ENSNBRG00000013604	-	75	47.973	ENSNBRG00000024086	-	79	49.650
ENSNBRG00000013604	-	96	54.706	ENSNBRG00000016282	-	98	57.764
ENSNBRG00000013604	-	70	42.202	ENSNBRG00000023091	snai1a	72	41.818
ENSNBRG00000013604	-	78	46.012	ENSNBRG00000016582	-	87	46.012
ENSNBRG00000013604	-	93	43.216	ENSNBRG00000024066	-	96	43.216
ENSNBRG00000013604	-	78	46.988	ENSNBRG00000001641	-	73	46.988
ENSNBRG00000013604	-	92	52.764	ENSNBRG00000000960	-	96	59.633
ENSNBRG00000013604	-	69	47.093	ENSNBRG00000007602	-	78	47.093
ENSNBRG00000013604	-	88	46.259	ENSNBRG00000002902	-	97	47.482
ENSNBRG00000013604	-	75	43.373	ENSNBRG00000009815	-	83	43.373
ENSNBRG00000013604	-	71	45.349	ENSNBRG00000009811	-	83	45.349
ENSNBRG00000013604	-	93	51.256	ENSNBRG00000023229	-	81	51.256
ENSNBRG00000013604	-	78	46.154	ENSNBRG00000008223	-	83	46.154
ENSNBRG00000013604	-	88	47.794	ENSNBRG00000021237	-	82	47.794
ENSNBRG00000013604	-	71	37.419	ENSNBRG00000008827	znf319b	91	37.419
ENSNBRG00000013604	-	78	53.012	ENSNBRG00000016577	si:dkey-182i3.9	91	47.436
ENSNBRG00000013604	-	79	49.153	ENSNBRG00000024054	-	67	49.153
ENSNBRG00000013604	-	75	47.222	ENSNBRG00000024051	-	50	47.222
ENSNBRG00000013604	-	71	48.148	ENSNBRG00000022241	-	90	48.148
ENSNBRG00000013604	-	73	39.416	ENSNBRG00000024293	-	91	39.706
ENSNBRG00000013604	-	73	41.228	ENSNBRG00000010351	-	88	41.228
ENSNBRG00000013604	-	92	52.121	ENSNBRG00000006112	-	53	52.121

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000013604	-	93	51.667	ENSACIG00000011153	-	96	57.219	Amphilophus_citrinellus
ENSNBRG00000013604	-	98	59.259	ENSACIG00000019791	-	96	59.447	Amphilophus_citrinellus
ENSNBRG00000013604	-	78	49.068	ENSANAG00000032414	-	80	49.068	Aotus_nancymaae
ENSNBRG00000013604	-	92	45.570	ENSACLG00000020474	-	92	51.553	Astatotilapia_calliptera
ENSNBRG00000013604	-	69	43.192	ENSACLG00000001507	-	76	43.192	Astatotilapia_calliptera
ENSNBRG00000013604	-	72	43.005	ENSACLG00000014167	-	60	43.005	Astatotilapia_calliptera
ENSNBRG00000013604	-	70	48.936	ENSACLG00000017329	-	81	48.936	Astatotilapia_calliptera
ENSNBRG00000013604	-	71	48.315	ENSACLG00000022499	-	76	48.315	Astatotilapia_calliptera
ENSNBRG00000013604	-	73	54.605	ENSAMXG00000031646	-	94	54.605	Astyanax_mexicanus
ENSNBRG00000013604	-	79	50.327	ENSAMXG00000039770	-	81	50.327	Astyanax_mexicanus
ENSNBRG00000013604	-	69	51.872	ENSAMXG00000010078	-	83	51.872	Astyanax_mexicanus
ENSNBRG00000013604	-	73	51.256	ENSAMXG00000039162	-	94	51.256	Astyanax_mexicanus
ENSNBRG00000013604	-	79	54.502	ENSAMXG00000031501	-	91	54.502	Astyanax_mexicanus
ENSNBRG00000013604	-	77	52.688	ENSAMXG00000036849	-	90	52.688	Astyanax_mexicanus
ENSNBRG00000013604	-	69	48.529	ENSAMXG00000031844	-	81	48.529	Astyanax_mexicanus
ENSNBRG00000013604	-	73	50.980	ENSAMXG00000038324	-	75	53.846	Astyanax_mexicanus
ENSNBRG00000013604	-	85	51.181	ENSCHIG00000015741	-	91	51.181	Capra_hircus
ENSNBRG00000013604	-	75	51.534	ENSCCAG00000035188	-	82	48.619	Cebus_capucinus
ENSNBRG00000013604	-	69	48.322	ENSCPBG00000001258	-	91	46.597	Chrysemys_picta_bellii
ENSNBRG00000013604	-	73	48.815	ENSDNOG00000048084	-	84	49.282	Dasypus_novemcinctus
ENSNBRG00000013604	-	84	45.498	ENSETEG00000002865	-	83	45.550	Echinops_telfairi
ENSNBRG00000013604	-	70	45.161	ENSEBUG00000011582	-	72	45.161	Eptatretus_burgeri
ENSNBRG00000013604	-	91	46.759	ENSEBUG00000011479	-	82	46.759	Eptatretus_burgeri
ENSNBRG00000013604	-	69	46.541	ENSEBUG00000008157	-	98	48.571	Eptatretus_burgeri
ENSNBRG00000013604	-	73	52.448	ENSEBUG00000012748	-	67	52.448	Eptatretus_burgeri
ENSNBRG00000013604	-	69	45.745	ENSECAG00000035557	-	74	46.067	Equus_caballus
ENSNBRG00000013604	-	70	42.929	ENSFHEG00000016184	-	73	42.929	Fundulus_heteroclitus
ENSNBRG00000013604	-	70	46.584	ENSGMOG00000004315	-	95	46.584	Gadus_morhua
ENSNBRG00000013604	-	70	40.994	ENSGACG00000019863	-	98	40.994	Gasterosteus_aculeatus
ENSNBRG00000013604	-	70	53.254	ENSGAGG00000007230	-	75	53.254	Gopherus_agassizii
ENSNBRG00000013604	-	93	53.459	ENSGAGG00000013851	-	90	53.459	Gopherus_agassizii
ENSNBRG00000013604	-	94	98.582	ENSHBUG00000017372	-	94	100.000	Haplochromis_burtoni
ENSNBRG00000013604	-	87	51.799	ENSHBUG00000000146	-	99	58.289	Haplochromis_burtoni
ENSNBRG00000013604	-	93	60.920	ENSHBUG00000021028	-	99	53.052	Haplochromis_burtoni
ENSNBRG00000013604	-	69	43.636	ENSHBUG00000006238	-	92	43.636	Haplochromis_burtoni
ENSNBRG00000013604	-	69	53.416	ENSHBUG00000019800	-	85	53.416	Haplochromis_burtoni
ENSNBRG00000013604	-	75	42.424	ENSHBUG00000013264	-	85	42.424	Haplochromis_burtoni
ENSNBRG00000013604	-	77	59.627	ENSHGLG00000018394	-	83	59.627	Heterocephalus_glaber_female
ENSNBRG00000013604	-	73	50.526	ENSIPUG00000009750	-	83	50.526	Ictalurus_punctatus
ENSNBRG00000013604	-	72	53.293	ENSIPUG00000021484	-	98	53.293	Ictalurus_punctatus
ENSNBRG00000013604	-	77	55.921	ENSIPUG00000013065	-	94	54.037	Ictalurus_punctatus
ENSNBRG00000013604	-	76	50.633	ENSIPUG00000001941	-	83	50.633	Ictalurus_punctatus
ENSNBRG00000013604	-	72	48.485	ENSIPUG00000021472	-	75	48.485	Ictalurus_punctatus
ENSNBRG00000013604	-	70	49.198	ENSIPUG00000015233	-	70	49.198	Ictalurus_punctatus
ENSNBRG00000013604	-	77	52.601	ENSIPUG00000011073	-	97	52.601	Ictalurus_punctatus
ENSNBRG00000013604	-	74	48.731	ENSIPUG00000021434	-	95	48.731	Ictalurus_punctatus
ENSNBRG00000013604	-	76	48.744	ENSIPUG00000021527	-	91	48.744	Ictalurus_punctatus
ENSNBRG00000013604	-	75	51.323	ENSIPUG00000006936	-	93	51.323	Ictalurus_punctatus
ENSNBRG00000013604	-	76	48.276	ENSIPUG00000021518	-	88	51.471	Ictalurus_punctatus
ENSNBRG00000013604	-	69	47.644	ENSIPUG00000003960	-	85	47.644	Ictalurus_punctatus
ENSNBRG00000013604	-	73	52.564	ENSIPUG00000022751	-	95	53.448	Ictalurus_punctatus
ENSNBRG00000013604	-	78	53.030	ENSSTOG00000034297	-	69	53.030	Ictidomys_tridecemlineatus
ENSNBRG00000013604	-	76	53.731	ENSMFAG00000046052	-	85	53.731	Macaca_fascicularis
ENSNBRG00000013604	-	76	50.811	ENSMNEG00000041636	-	85	53.731	Macaca_nemestrina
ENSNBRG00000013604	-	76	53.731	ENSMLEG00000032640	-	85	53.731	Mandrillus_leucophaeus
ENSNBRG00000013604	-	74	42.079	ENSMAMG00000009051	-	95	45.026	Mastacembelus_armatus
ENSNBRG00000013604	-	72	41.784	ENSMZEG00005012737	-	79	41.784	Maylandia_zebra
ENSNBRG00000013604	-	73	44.828	ENSMZEG00005027285	-	84	44.828	Maylandia_zebra
ENSNBRG00000013604	-	69	50.311	ENSMZEG00005021421	-	94	50.311	Maylandia_zebra
ENSNBRG00000013604	-	69	43.529	ENSMZEG00005027950	-	89	43.529	Maylandia_zebra
ENSNBRG00000013604	-	75	46.667	ENSMZEG00005020736	-	89	46.667	Maylandia_zebra
ENSNBRG00000013604	-	72	41.509	ENSMZEG00005019982	-	94	41.509	Maylandia_zebra
ENSNBRG00000013604	-	69	52.137	ENSMALG00000004413	-	93	52.137	Monopterus_albus
ENSNBRG00000013604	-	75	47.887	ENSONIG00000021124	-	99	47.887	Oreochromis_niloticus
ENSNBRG00000013604	-	70	42.953	ENSONIG00000015166	-	100	42.953	Oreochromis_niloticus
ENSNBRG00000013604	-	74	43.651	ENSONIG00000001834	-	99	43.651	Oreochromis_niloticus
ENSNBRG00000013604	-	77	42.286	ENSONIG00000007931	-	83	42.286	Oreochromis_niloticus
ENSNBRG00000013604	-	74	58.602	ENSONIG00000020516	-	99	58.883	Oreochromis_niloticus
ENSNBRG00000013604	-	69	43.038	ENSONIG00000000093	-	97	43.038	Oreochromis_niloticus
ENSNBRG00000013604	-	70	43.575	ENSONIG00000000122	-	99	43.575	Oreochromis_niloticus
ENSNBRG00000013604	-	74	41.753	ENSONIG00000008953	-	90	41.753	Oreochromis_niloticus
ENSNBRG00000013604	-	91	50.000	ENSORLG00015012951	-	80	50.888	Oryzias_latipes_hsok
ENSNBRG00000013604	-	80	51.174	ENSOGAG00000025289	-	84	51.000	Otolemur_garnettii
ENSNBRG00000013604	-	76	53.731	ENSPANG00000030978	-	90	53.731	Papio_anubis
ENSNBRG00000013604	-	74	45.923	ENSPEMG00000016975	Zfp940	74	45.923	Peromyscus_maniculatus_bairdii
ENSNBRG00000013604	-	94	47.475	ENSPMEG00000004595	-	94	51.887	Poecilia_mexicana
ENSNBRG00000013604	-	70	59.259	ENSPPYG00000009906	-	70	59.259	Pongo_abelii
ENSNBRG00000013604	-	74	43.046	ENSPNYG00000024244	-	85	43.046	Pundamilia_nyererei
ENSNBRG00000013604	-	73	55.975	ENSPNAG00000019338	-	95	55.975	Pygocentrus_nattereri
ENSNBRG00000013604	-	74	47.706	ENSPNAG00000011625	-	73	48.611	Pygocentrus_nattereri
ENSNBRG00000013604	-	76	53.731	ENSSBOG00000029728	-	85	53.731	Saimiri_boliviensis_boliviensis
ENSNBRG00000013604	-	74	51.759	ENSSPUG00000010059	-	77	51.759	Sphenodon_punctatus