EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000013629 (Gene tree)
Gene ID: 102775865
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: regulator of nonsense transcripts 2-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 22109 bases
Position: chrJH422274.1:15749701-15771809
Accession: 102775865
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000017711	Upf2	PF04050.14	2.6e-31	1	1
ENSNBRP00000017711	MIF4G	PF02854.19	1.9e-80	1	3
ENSNBRP00000017711	MIF4G	PF02854.19	1.9e-80	2	3
ENSNBRP00000017711	MIF4G	PF02854.19	1.9e-80	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000018189	UPF2-201	5958	XM_006780961	ENSNBRP00000017711	1275 (aa)	XP_006781024	UPI0003AF32B7

Gene Model

Click here to download ENSNBRG00000013629's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000013629's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000013629	UPF2	100	82.619	ENSG00000151461	UPF2	100	80.904	Homo_sapiens
ENSNBRG00000013629	UPF2	99	90.368	ENSAPOG00000015837	UPF2	100	90.361	Acanthochromis_polyacanthus
ENSNBRG00000013629	UPF2	100	83.073	ENSAMEG00000004586	UPF2	100	81.279	Ailuropoda_melanoleuca
ENSNBRG00000013629	UPF2	99	98.507	ENSACIG00000018078	UPF2	100	98.507	Amphilophus_citrinellus
ENSNBRG00000013629	UPF2	100	96.714	ENSAOCG00000016766	UPF2	100	96.714	Amphiprion_ocellaris
ENSNBRG00000013629	UPF2	100	96.792	ENSAPEG00000019084	UPF2	100	96.792	Amphiprion_percula
ENSNBRG00000013629	UPF2	100	96.792	ENSATEG00000021677	UPF2	99	96.792	Anabas_testudineus
ENSNBRG00000013629	UPF2	100	78.710	ENSAPLG00000010287	UPF2	90	83.348	Anas_platyrhynchos
ENSNBRG00000013629	UPF2	100	82.917	ENSACAG00000009259	UPF2	100	82.995	Anolis_carolinensis
ENSNBRG00000013629	UPF2	91	79.177	ENSANAG00000028451	UPF2	93	79.249	Aotus_nancymaae
ENSNBRG00000013629	UPF2	100	99.843	ENSACLG00000012696	UPF2	100	99.843	Astatotilapia_calliptera
ENSNBRG00000013629	UPF2	99	89.445	ENSAMXG00000013700	UPF2	99	89.367	Astyanax_mexicanus
ENSNBRG00000013629	UPF2	100	83.073	ENSBTAG00000000288	UPF2	100	81.357	Bos_taurus
ENSNBRG00000013629	UPF2	100	82.371	ENSCJAG00000020685	UPF2	100	81.045	Callithrix_jacchus
ENSNBRG00000013629	UPF2	100	83.151	ENSCAFG00000004839	UPF2	100	81.357	Canis_familiaris
ENSNBRG00000013629	UPF2	95	86.735	ENSCAFG00020005882	UPF2	99	87.755	Canis_lupus_dingo
ENSNBRG00000013629	UPF2	100	83.229	ENSCHIG00000020359	UPF2	100	81.357	Capra_hircus
ENSNBRG00000013629	UPF2	100	82.839	ENSTSYG00000000935	UPF2	97	86.932	Carlito_syrichta
ENSNBRG00000013629	UPF2	91	75.086	ENSCAPG00000016658	UPF2	95	74.659	Cavia_aperea
ENSNBRG00000013629	UPF2	99	79.874	ENSCPOG00000008809	UPF2	100	79.167	Cavia_porcellus
ENSNBRG00000013629	UPF2	100	76.168	ENSCCAG00000035991	UPF2	100	74.922	Cebus_capucinus
ENSNBRG00000013629	UPF2	100	82.775	ENSCATG00000032679	UPF2	100	81.060	Cercocebus_atys
ENSNBRG00000013629	UPF2	100	81.889	ENSCLAG00000011434	UPF2	100	81.187	Chinchilla_lanigera
ENSNBRG00000013629	UPF2	100	82.775	ENSCSAG00000013372	UPF2	100	81.060	Chlorocebus_sabaeus
ENSNBRG00000013629	UPF2	79	88.914	ENSCHOG00000000422	UPF2	81	88.914	Choloepus_hoffmanni
ENSNBRG00000013629	UPF2	99	81.548	ENSCPBG00000027823	UPF2	100	81.562	Chrysemys_picta_bellii
ENSNBRG00000013629	UPF2	79	49.852	ENSCSAVG00000007772	-	99	48.826	Ciona_savignyi
ENSNBRG00000013629	UPF2	99	77.614	ENSCANG00000040396	UPF2	100	76.209	Colobus_angolensis_palliatus
ENSNBRG00000013629	UPF2	100	82.436	ENSCGRG00001019347	Upf2	100	80.562	Cricetulus_griseus_chok1gshd
ENSNBRG00000013629	UPF2	100	82.436	ENSCGRG00000017993	Upf2	100	80.562	Cricetulus_griseus_crigri
ENSNBRG00000013629	UPF2	99	85.781	ENSCSEG00000003520	UPF2	99	85.479	Cynoglossus_semilaevis
ENSNBRG00000013629	UPF2	99	94.243	ENSCVAG00000006167	UPF2	100	93.691	Cyprinodon_variegatus
ENSNBRG00000013629	UPF2	100	82.917	ENSDNOG00000018160	UPF2	100	81.045	Dasypus_novemcinctus
ENSNBRG00000013629	UPF2	100	82.761	ENSDORG00000002478	Upf2	100	80.967	Dipodomys_ordii
ENSNBRG00000013629	UPF2	73	92.647	ENSETEG00000011583	-	62	92.647	Echinops_telfairi
ENSNBRG00000013629	UPF2	64	73.826	ENSEBUG00000012448	-	93	68.460	Eptatretus_burgeri
ENSNBRG00000013629	UPF2	100	82.201	ENSEASG00005019274	UPF2	100	81.499	Equus_asinus_asinus
ENSNBRG00000013629	UPF2	100	82.201	ENSECAG00000017022	UPF2	100	81.499	Equus_caballus
ENSNBRG00000013629	UPF2	82	75.157	ENSEEUG00000007819	UPF2	74	75.441	Erinaceus_europaeus
ENSNBRG00000013629	UPF2	99	88.846	ENSELUG00000012014	UPF2	100	89.314	Esox_lucius
ENSNBRG00000013629	UPF2	100	85.635	ENSFCAG00000005785	UPF2	100	81.201	Felis_catus
ENSNBRG00000013629	UPF2	100	83.476	ENSFALG00000001889	UPF2	98	81.684	Ficedula_albicollis
ENSNBRG00000013629	UPF2	100	81.421	ENSFDAG00000014348	UPF2	100	80.562	Fukomys_damarensis
ENSNBRG00000013629	UPF2	99	94.401	ENSFHEG00000009826	UPF2	100	94.006	Fundulus_heteroclitus
ENSNBRG00000013629	UPF2	91	90.147	ENSGMOG00000005557	UPF2	100	88.447	Gadus_morhua
ENSNBRG00000013629	UPF2	100	84.412	ENSGALG00000033772	UPF2	100	82.541	Gallus_gallus
ENSNBRG00000013629	UPF2	100	93.505	ENSGAFG00000020867	UPF2	100	93.114	Gambusia_affinis
ENSNBRG00000013629	UPF2	99	93.130	ENSGACG00000001080	UPF2	100	93.677	Gasterosteus_aculeatus
ENSNBRG00000013629	UPF2	100	82.619	ENSGAGG00000002700	UPF2	100	80.841	Gopherus_agassizii
ENSNBRG00000013629	UPF2	100	82.619	ENSGGOG00000001479	UPF2	100	80.904	Gorilla_gorilla
ENSNBRG00000013629	UPF2	100	99.843	ENSHBUG00000004249	UPF2	100	100.000	Haplochromis_burtoni
ENSNBRG00000013629	UPF2	100	81.499	ENSHGLG00000015176	-	100	80.796	Heterocephalus_glaber_female
ENSNBRG00000013629	UPF2	99	72.770	ENSHGLG00000003822	-	99	72.848	Heterocephalus_glaber_female
ENSNBRG00000013629	UPF2	99	79.203	ENSHGLG00100010036	UPF2	100	78.013	Heterocephalus_glaber_male
ENSNBRG00000013629	UPF2	100	91.115	ENSHCOG00000004025	UPF2	99	91.037	Hippocampus_comes
ENSNBRG00000013629	UPF2	100	87.900	ENSIPUG00000015524	UPF2	100	85.859	Ictalurus_punctatus
ENSNBRG00000013629	UPF2	100	82.839	ENSSTOG00000013075	UPF2	100	80.889	Ictidomys_tridecemlineatus
ENSNBRG00000013629	UPF2	100	79.781	ENSJJAG00000004913	Upf2	100	80.640	Jaculus_jaculus
ENSNBRG00000013629	UPF2	99	94.322	ENSKMAG00000001071	UPF2	100	94.322	Kryptolebias_marmoratus
ENSNBRG00000013629	UPF2	100	95.462	ENSLBEG00000016394	-	99	95.462	Labrus_bergylta
ENSNBRG00000013629	UPF2	80	92.654	ENSLBEG00000000728	-	94	92.564	Labrus_bergylta
ENSNBRG00000013629	UPF2	99	77.457	ENSLACG00000015945	UPF2	100	77.691	Latimeria_chalumnae
ENSNBRG00000013629	UPF2	99	88.661	ENSLOCG00000015698	UPF2	100	88.346	Lepisosteus_oculatus
ENSNBRG00000013629	UPF2	100	82.775	ENSMFAG00000043865	UPF2	100	81.060	Macaca_fascicularis
ENSNBRG00000013629	UPF2	100	82.775	ENSMMUG00000008241	UPF2	100	81.060	Macaca_mulatta
ENSNBRG00000013629	UPF2	80	83.528	ENSMNEG00000008062	UPF2	99	81.189	Macaca_nemestrina
ENSNBRG00000013629	UPF2	99	80.733	ENSMLEG00000036120	UPF2	100	78.923	Mandrillus_leucophaeus
ENSNBRG00000013629	UPF2	100	96.714	ENSMAMG00000018276	UPF2	100	96.714	Mastacembelus_armatus
ENSNBRG00000013629	UPF2	100	99.843	ENSMZEG00005021595	UPF2	100	99.843	Maylandia_zebra
ENSNBRG00000013629	UPF2	99	83.947	ENSMGAG00000004573	UPF2	99	82.224	Meleagris_gallopavo
ENSNBRG00000013629	UPF2	100	80.406	ENSMAUG00000016512	Upf2	100	78.532	Mesocricetus_auratus
ENSNBRG00000013629	UPF2	95	86.224	ENSMICG00000001716	UPF2	99	87.245	Microcebus_murinus
ENSNBRG00000013629	UPF2	100	81.406	ENSMOCG00000008263	Upf2	100	80.938	Microtus_ochrogaster
ENSNBRG00000013629	UPF2	99	89.655	ENSMMOG00000006528	UPF2	100	89.498	Mola_mola
ENSNBRG00000013629	UPF2	100	81.201	ENSMODG00000016794	UPF2	100	81.435	Monodelphis_domestica
ENSNBRG00000013629	UPF2	99	94.828	ENSMALG00000002663	UPF2	100	94.828	Monopterus_albus
ENSNBRG00000013629	UPF2	100	82.279	MGP_CAROLIEiJ_G0023157	Upf2	99	84.696	Mus_caroli
ENSNBRG00000013629	UPF2	100	82.592	ENSMUSG00000043241	Upf2	99	83.962	Mus_musculus
ENSNBRG00000013629	UPF2	100	82.670	MGP_PahariEiJ_G0019217	Upf2	100	83.962	Mus_pahari
ENSNBRG00000013629	UPF2	100	82.826	MGP_SPRETEiJ_G0024075	Upf2	100	83.962	Mus_spretus
ENSNBRG00000013629	UPF2	100	82.995	ENSMPUG00000001064	UPF2	100	81.357	Mustela_putorius_furo
ENSNBRG00000013629	UPF2	99	82.449	ENSMLUG00000000228	UPF2	100	80.685	Myotis_lucifugus
ENSNBRG00000013629	UPF2	100	82.619	ENSNLEG00000012058	UPF2	100	80.904	Nomascus_leucogenys
ENSNBRG00000013629	UPF2	72	93.662	ENSOPRG00000006801	-	73	93.662	Ochotona_princeps
ENSNBRG00000013629	UPF2	100	81.733	ENSODEG00000001290	UPF2	100	80.874	Octodon_degus
ENSNBRG00000013629	UPF2	100	99.608	ENSONIG00000017991	UPF2	100	99.608	Oreochromis_niloticus
ENSNBRG00000013629	UPF2	99	81.712	ENSOCUG00000006230	UPF2	100	80.856	Oryctolagus_cuniculus
ENSNBRG00000013629	UPF2	100	92.572	ENSORLG00000017189	UPF2	100	92.729	Oryzias_latipes
ENSNBRG00000013629	UPF2	100	92.651	ENSORLG00020005969	UPF2	100	92.807	Oryzias_latipes_hni
ENSNBRG00000013629	UPF2	100	92.651	ENSORLG00015005713	UPF2	100	92.807	Oryzias_latipes_hsok
ENSNBRG00000013629	UPF2	99	89.577	ENSOMEG00000023420	UPF2	98	89.498	Oryzias_melastigma
ENSNBRG00000013629	UPF2	100	83.229	ENSOGAG00000005796	UPF2	100	80.967	Otolemur_garnettii
ENSNBRG00000013629	UPF2	100	83.100	ENSOARG00000014587	UPF2	100	81.231	Ovis_aries
ENSNBRG00000013629	UPF2	99	80.109	ENSPPAG00000037953	UPF2	100	78.298	Pan_paniscus
ENSNBRG00000013629	UPF2	100	82.995	ENSPPRG00000000690	UPF2	100	81.201	Panthera_pardus
ENSNBRG00000013629	UPF2	100	82.995	ENSPTIG00000008867	UPF2	100	81.201	Panthera_tigris_altaica
ENSNBRG00000013629	UPF2	100	82.619	ENSPTRG00000002291	UPF2	100	80.904	Pan_troglodytes
ENSNBRG00000013629	UPF2	100	82.775	ENSPANG00000023399	UPF2	100	81.060	Papio_anubis
ENSNBRG00000013629	UPF2	100	88.447	ENSPKIG00000025502	UPF2	100	86.885	Paramormyrops_kingsleyae
ENSNBRG00000013629	UPF2	59	81.579	ENSPSIG00000015158	UPF2	95	81.447	Pelodiscus_sinensis
ENSNBRG00000013629	UPF2	99	90.204	ENSPMGG00000005259	UPF2	100	90.204	Periophthalmus_magnuspinnatus
ENSNBRG00000013629	UPF2	93	76.945	ENSPEMG00000015731	Upf2	99	70.119	Peromyscus_maniculatus_bairdii
ENSNBRG00000013629	UPF2	100	83.385	ENSPCIG00000006656	UPF2	100	81.513	Phascolarctos_cinereus
ENSNBRG00000013629	UPF2	100	93.897	ENSPFOG00000017118	UPF2	100	93.505	Poecilia_formosa
ENSNBRG00000013629	UPF2	100	93.897	ENSPLAG00000005094	UPF2	100	93.505	Poecilia_latipinna
ENSNBRG00000013629	UPF2	100	93.818	ENSPMEG00000017009	UPF2	100	93.427	Poecilia_mexicana
ENSNBRG00000013629	UPF2	99	92.163	ENSPREG00000021880	UPF2	100	92.163	Poecilia_reticulata
ENSNBRG00000013629	UPF2	66	84.935	ENSPPYG00000002089	-	100	85.172	Pongo_abelii
ENSNBRG00000013629	UPF2	95	81.314	ENSPCAG00000000684	UPF2	100	70.905	Procavia_capensis
ENSNBRG00000013629	UPF2	99	80.234	ENSPCOG00000021656	UPF2	100	78.594	Propithecus_coquereli
ENSNBRG00000013629	UPF2	100	76.539	ENSPVAG00000017286	UPF2	100	74.669	Pteropus_vampyrus
ENSNBRG00000013629	UPF2	99	97.408	ENSPNYG00000017096	UPF2	100	97.408	Pundamilia_nyererei
ENSNBRG00000013629	UPF2	100	89.556	ENSPNAG00000009357	UPF2	100	89.790	Pygocentrus_nattereri
ENSNBRG00000013629	UPF2	99	78.755	ENSRNOG00000023593	Upf2	100	94.444	Rattus_norvegicus
ENSNBRG00000013629	UPF2	99	81.562	ENSRBIG00000037780	UPF2	100	80.063	Rhinopithecus_bieti
ENSNBRG00000013629	UPF2	100	82.541	ENSRROG00000043547	UPF2	100	80.748	Rhinopithecus_roxellana
ENSNBRG00000013629	UPF2	100	82.137	ENSSBOG00000020012	UPF2	100	80.733	Saimiri_boliviensis_boliviensis
ENSNBRG00000013629	UPF2	100	87.354	ENSSFOG00015023788	upf2	100	87.354	Scleropages_formosus
ENSNBRG00000013629	UPF2	90	92.028	ENSSMAG00000007637	UPF2	100	91.770	Scophthalmus_maximus
ENSNBRG00000013629	UPF2	100	96.479	ENSSDUG00000017244	UPF2	99	96.479	Seriola_dumerili
ENSNBRG00000013629	UPF2	99	93.025	ENSSLDG00000016866	UPF2	100	92.633	Seriola_lalandi_dorsalis
ENSNBRG00000013629	UPF2	100	81.761	ENSSARG00000008615	UPF2	100	80.125	Sorex_araneus
ENSNBRG00000013629	UPF2	99	80.874	ENSSPUG00000014544	UPF2	99	80.718	Sphenodon_punctatus
ENSNBRG00000013629	UPF2	68	84.800	ENSSSCG00000011117	-	99	85.029	Sus_scrofa
ENSNBRG00000013629	UPF2	99	83.047	ENSTGUG00000002163	-	100	81.406	Taeniopygia_guttata
ENSNBRG00000013629	UPF2	100	93.818	ENSTRUG00000007519	UPF2	99	93.818	Takifugu_rubripes
ENSNBRG00000013629	UPF2	100	90.234	ENSTNIG00000004453	UPF2	100	89.766	Tetraodon_nigroviridis
ENSNBRG00000013629	UPF2	93	75.252	ENSTBEG00000012679	UPF2	93	73.490	Tupaia_belangeri
ENSNBRG00000013629	UPF2	100	81.889	ENSTTRG00000016388	UPF2	100	81.265	Tursiops_truncatus
ENSNBRG00000013629	UPF2	87	94.382	ENSUAMG00000023560	UPF2	98	94.382	Ursus_americanus
ENSNBRG00000013629	UPF2	100	83.229	ENSUMAG00000012953	UPF2	95	81.435	Ursus_maritimus
ENSNBRG00000013629	UPF2	83	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSNBRG00000013629	UPF2	100	83.151	ENSVVUG00000006166	UPF2	100	81.357	Vulpes_vulpes
ENSNBRG00000013629	UPF2	100	79.922	ENSXETG00000033103	UPF2	91	84.523	Xenopus_tropicalis
ENSNBRG00000013629	UPF2	99	93.652	ENSXCOG00000011604	UPF2	100	93.260	Xiphophorus_couchianus
ENSNBRG00000013629	UPF2	100	93.818	ENSXMAG00000017209	UPF2	100	93.427	Xiphophorus_maculatus